EnhancerDB
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  3. vista1238[chr1:38518708-38519047]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1238[chr1:38518708-38519047]
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Tissue distribution of vista1238
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Transcription factor that possibly regulate vista1238[chr1:38518708-38519047]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38518727 38518745 SRF JASPAR yes 118274312
chr1 38518731 38518735 YY1 TRANSFAC yes 118274313
chr1 38518749 38518769 RREB1 JASPAR yes 118274314
chr1 38518773 38518786 SMAD2 JASPAR yes 118274315
chr1 38518797 38518810 SMAD2 JASPAR yes 118274316
chr1 38518809 38518822 ELF3 JASPAR yes 118274317
chr1 38518810 38518820 ELK1 JASPAR yes 118274318
chr1 38518810 38518820 ELK3 JASPAR yes 118274319
chr1 38518810 38518820 ERF JASPAR yes 118274320
chr1 38518810 38518820 ERG JASPAR yes 118274321
chr1 38518810 38518820 ETS1 JASPAR yes 118274322
chr1 38518810 38518820 ETV1 JASPAR yes 118274323
chr1 38518810 38518820 ETV3 JASPAR yes 118274324
chr1 38518810 38518820 ETV4 JASPAR yes 118274325
chr1 38518810 38518820 ETV5 JASPAR yes 118274326
chr1 38518810 38518820 ETV6 JASPAR yes 118274327
chr1 38518810 38518820 FEV JASPAR yes 118274328
chr1 38518810 38518820 FLI1 JASPAR yes 118274329
chr1 38518810 38518821 ELF5 JASPAR yes 118274330
chr1 38518810 38518821 ETV2 JASPAR yes 118274331
chr1 38518810 38518822 EHF JASPAR yes 118274332
chr1 38518810 38518822 ELF1 JASPAR yes 118274333
chr1 38518810 38518822 ELF4 JASPAR yes 118274334
chr1 38518810 38518824 SPIC JASPAR yes 118274335
chr1 38518812 38518818 ETS1 JASPAR yes 118274336
chr1 38518812 38518818 SPI1 JASPAR yes 118274337
chr1 38518833 38518838 GATA2 JASPAR yes 118274338
chr1 38518840 38518850 HOXA13 JASPAR yes 118274339
chr1 38518840 38518850 HOXB13 JASPAR yes 118274340
chr1 38518840 38518850 HOXD13 JASPAR yes 118274341
chr1 38518840 38518851 HOXA10 JASPAR yes 118274342
chr1 38518841 38518850 CDX1 JASPAR yes 118274343
chr1 38518859 38518869 ETV6 JASPAR yes 118274344
chr1 38518871 38518876 SP1 TRANSFAC yes 118274345
chr1 38518884 38518905 ZNF263 JASPAR yes 118274346
chr1 38518895 38518910 TFAP2A JASPAR yes 118274347
chr1 38518895 38518910 TFAP2C JASPAR yes 118274348
chr1 38518898 38518909 TFAP2A JASPAR yes 118274349
chr1 38518898 38518909 TFAP2B JASPAR yes 118274350
chr1 38518898 38518909 TFAP2C JASPAR yes 118274351
chr1 38518898 38518910 TFAP2A JASPAR yes 118274352
chr1 38518898 38518910 TFAP2B JASPAR yes 118274353
chr1 38518898 38518910 TFAP2C JASPAR yes 118274354
chr1 38518910 38518924 EBF1 JASPAR yes 118274355
chr1 38518911 38518922 EBF1 JASPAR yes 118274356
chr1 38518912 38518923 EBF1 JASPAR yes 118274357
chr1 38518920 38518926 PEA3 TRANSFAC yes 118274358
chr1 38518920 38518941 ZNF263 JASPAR yes 118274359
chr1 38518921 38518929 EHF JASPAR yes 118274360
chr1 38518921 38518942 ZNF263 JASPAR yes 118274361
chr1 38518939 38518943 LFA1 TRANSFAC yes 118274362
chr1 38518939 38518949 NFKB1 JASPAR yes 118274363
chr1 38518952 38518964 NHLH1 JASPAR yes 118274364
chr1 38518953 38518963 ID4 JASPAR yes 118274365
chr1 38518953 38518963 NHLH1 JASPAR yes 118274366
chr1 38518953 38518963 TCF3 JASPAR yes 118274367
chr1 38518953 38518963 TCF4 JASPAR yes 118274368
chr1 38518954 38518963 SNAI2 JASPAR yes 118274369
chr1 38518955 38518960 USF2 TRANSFAC yes 118274370
chr1 38518961 38518971 ZNF740 JASPAR yes 118274371
chr1 38518963 38518973 SP1 JASPAR yes 118274372
chr1 38518963 38518973 ZNF740 JASPAR yes 118274373
chr1 38518975 38518989 PAX6 JASPAR yes 118274374
chr1 38518982 38518995 POU2F2 JASPAR yes 118274375
chr1 38518982 38518996 POU1F1 JASPAR yes 118274376
chr1 38518983 38518992 POU2F1 TRANSFAC yes 118274377
chr1 38518983 38518995 POU3F1 JASPAR yes 118274378
chr1 38518983 38518995 POU3F2 JASPAR yes 118274379
chr1 38518983 38518996 POU3F3 JASPAR yes 118274380
chr1 38518984 38518996 POU2F1 JASPAR yes 118274381
chr1 38518985 38518992 POU2F1 TRANSFAC yes 118274382
chr1 38518985 38518992 POU2F2C TRANSFAC yes 118274383
chr1 38518985 38518992 POU2F2 TRANSFAC yes 118274384
chr1 38518985 38518993 POU2F1 TRANSFAC yes 118274385
chr1 38518985 38518994 POU3F4 JASPAR yes 118274386
chr1 38518985 38518994 POU5F1B JASPAR yes 118274387
chr1 38518988 38519001 POU2F2 JASPAR yes 118274388
chr1 38519019 38519024 TFAP2A TRANSFAC yes 118274389
chr1 38519019 38519025 MZF1 JASPAR yes 118274390
SNP sites on vista1238[chr1:38518708-38519047]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38518711 rs114218909 C T no 240920
chr1 38518809 rs144748137 A G
ELF3 SMAD2
240921
chr1 38518902 rs147898794 C T
TFAP2A TFAP2B TFAP2C ZNF263
240922
chr1 38518924 rs375071786 G A
EBF1 EHF PEA3 ZNF263
240923
chr1 38518963 rs201555743 T TG
ID4 NHLH1 SNAI2 SP1 TCF3 TCF4 ZNF740
240924
chr1 38518969 rs140546151 G T
SP1 ZNF740
240925
Genes possibly regulated by vista1238[chr1:38518708-38519047]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 38422647 38456593 - SF3A3 ENSG00000183431.7 38456593 0.78 0.99 534 37885
chr1 38462442 38471278 - FHL3 ENSG00000183386.5 38471278 0.83 1.0 535 52570
chr1 38474930 38490496 + UTP11L ENSG00000183520.7 38474930 0.71 0.98 536 56222
chr1 38509523 38512450 - POU3F1 ENSG00000185668.5 38512450 0.9 1.0 537 93742
Expression level of Genes
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miRNAs possibly regulated by vista1238[chr1:38518708-38519047]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results