EnhancerDB
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  3. vista1239[chr1:38536566-38536896]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1239[chr1:38536566-38536896]
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Tissue distribution of vista1239
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Transcription factor that possibly regulate vista1239[chr1:38536566-38536896]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38536556 38536566 MSC JASPAR yes 28194639
chr1 38536556 38536566 MSC JASPAR yes 118274391
chr1 38536564 38536569 ETS2 TRANSFAC yes 28194640
chr1 38536564 38536569 ETS2 TRANSFAC yes 118274392
chr1 38536578 38536599 ZNF263 JASPAR yes 28194641
chr1 38536578 38536599 ZNF263 JASPAR yes 118274393
chr1 38536605 38536612 CEBPA TRANSFAC yes 28194642
chr1 38536605 38536612 CEBPA TRANSFAC yes 118274394
chr1 38536606 38536617 E2F6 JASPAR yes 28194643
chr1 38536606 38536617 E2F6 JASPAR yes 118274395
chr1 38536606 38536619 SMAD2 JASPAR yes 28194644
chr1 38536606 38536619 SMAD2 JASPAR yes 118274396
chr1 38536636 38536649 SMAD2 JASPAR yes 28194645
chr1 38536636 38536649 SMAD2 JASPAR yes 118274397
chr1 38536655 38536670 HNF4A JASPAR yes 28194646
chr1 38536655 38536670 HNF4A JASPAR yes 118274398
chr1 38536656 38536671 HNF4G JASPAR yes 28194647
chr1 38536656 38536671 HNF4G JASPAR yes 118274399
chr1 38536663 38536680 RARA JASPAR yes 28194648
chr1 38536663 38536680 RARA JASPAR yes 118274400
chr1 38536677 38536687 ID4 JASPAR yes 28194649
chr1 38536677 38536687 TCF3 JASPAR yes 28194650
chr1 38536677 38536687 TCF4 JASPAR yes 28194651
chr1 38536677 38536687 ID4 JASPAR yes 118274401
chr1 38536677 38536687 TCF3 JASPAR yes 118274402
chr1 38536677 38536687 TCF4 JASPAR yes 118274403
chr1 38536702 38536706 YY1 TRANSFAC yes 28194652
chr1 38536702 38536706 YY1 TRANSFAC yes 118274404
chr1 38536720 38536732 TAL1 JASPAR yes 28194653
chr1 38536720 38536732 TAL1 JASPAR yes 118274405
chr1 38536721 38536733 NHLH1 JASPAR yes 28194654
chr1 38536721 38536733 NHLH1 JASPAR yes 118274406
chr1 38536722 38536732 MSC JASPAR yes 28194655
chr1 38536722 38536732 NHLH1 JASPAR yes 28194656
chr1 38536722 38536732 TFAP4 JASPAR yes 28194657
chr1 38536722 38536732 MSC JASPAR yes 118274407
chr1 38536722 38536732 NHLH1 JASPAR yes 118274408
chr1 38536722 38536732 TFAP4 JASPAR yes 118274409
chr1 38536735 38536739 NFE TRANSFAC yes 28194658
chr1 38536735 38536739 NFE TRANSFAC yes 118274410
chr1 38536736 38536751 RFX5 JASPAR yes 28194659
chr1 38536736 38536751 RFX5 JASPAR yes 118274411
chr1 38536756 38536771 TFAP2A JASPAR yes 28194660
chr1 38536756 38536771 TFAP2C JASPAR yes 28194661
chr1 38536756 38536771 TFAP2A JASPAR yes 118274412
chr1 38536756 38536771 TFAP2C JASPAR yes 118274413
chr1 38536757 38536766 THAP1 JASPAR yes 28194662
chr1 38536757 38536766 THAP1 JASPAR yes 118274414
chr1 38536758 38536771 TFAP2A JASPAR yes 28194663
chr1 38536758 38536771 TFAP2B JASPAR yes 28194664
chr1 38536758 38536771 TFAP2C JASPAR yes 28194665
chr1 38536758 38536771 TFAP2A JASPAR yes 118274415
chr1 38536758 38536771 TFAP2B JASPAR yes 118274416
chr1 38536758 38536771 TFAP2C JASPAR yes 118274417
chr1 38536758 38536773 TFAP2A JASPAR yes 28194666
chr1 38536758 38536773 TFAP2C JASPAR yes 28194667
chr1 38536758 38536773 TFAP2A JASPAR yes 118274418
chr1 38536758 38536773 TFAP2C JASPAR yes 118274419
chr1 38536766 38536770 LFA1 TRANSFAC yes 28194668
chr1 38536766 38536770 LFA1 TRANSFAC yes 118274420
chr1 38536792 38536797 ETS2 TRANSFAC yes 28194669
chr1 38536792 38536797 ETS2 TRANSFAC yes 118274421
chr1 38536826 38536832 NFE2 TRANSFAC yes 28194670
chr1 38536826 38536832 NFE2 TRANSFAC yes 118274422
chr1 38536829 38536842 EOMES JASPAR yes 28194671
chr1 38536829 38536842 EOMES JASPAR yes 118274423
chr1 38536831 38536841 TBR1 JASPAR yes 28194672
chr1 38536831 38536841 TBR1 JASPAR yes 118274424
chr1 38536831 38536842 TBX20 JASPAR yes 28194673
chr1 38536831 38536842 TBX2 JASPAR yes 28194674
chr1 38536831 38536842 TBX20 JASPAR yes 118274425
chr1 38536831 38536842 TBX2 JASPAR yes 118274426
chr1 38536832 38536842 TBX21 JASPAR yes 28194675
chr1 38536832 38536842 TBX21 JASPAR yes 118274427
chr1 38536833 38536841 MGA JASPAR yes 28194676
chr1 38536833 38536841 TBX15 JASPAR yes 28194677
chr1 38536833 38536841 TBX1 JASPAR yes 28194678
chr1 38536833 38536841 TBX4 JASPAR yes 28194679
chr1 38536833 38536841 TBX5 JASPAR yes 28194680
chr1 38536833 38536841 MGA JASPAR yes 118274428
chr1 38536833 38536841 TBX15 JASPAR yes 118274429
chr1 38536833 38536841 TBX1 JASPAR yes 118274430
chr1 38536833 38536841 TBX4 JASPAR yes 118274431
chr1 38536833 38536841 TBX5 JASPAR yes 118274432
chr1 38536840 38536860 PPARG JASPAR yes 28194681
chr1 38536840 38536860 PPARG JASPAR yes 118274433
chr1 38536860 38536864 ESR1 TRANSFAC yes 28194682
chr1 38536860 38536864 ESR1 TRANSFAC yes 118274434
chr1 38536870 38536879 NKX2-8 JASPAR yes 28194683
chr1 38536870 38536879 NKX2-8 JASPAR yes 118274435
chr1 38536870 38536880 NKX2-3 JASPAR yes 28194684
chr1 38536870 38536880 NKX2-3 JASPAR yes 118274436
chr1 38536879 38536882 MYB TRANSFAC yes 28194685
chr1 38536879 38536882 MYB TRANSFAC yes 118274437
chr1 38536883 38536894 FOXH1 JASPAR yes 28194686
chr1 38536883 38536894 FOXH1 JASPAR yes 118274438
SNP sites on vista1239[chr1:38536566-38536896]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38536578 rs149151013 A T
ZNF263
241095
chr1 38536817 rs369690543 C A no 241096
chr1 38536859 rs12033396 A G
PPARG
241097
Genes possibly regulated by vista1239[chr1:38536566-38536896]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 38422647 38456593 - SF3A3 ENSG00000183431.7 38456593 0.78 0.99 534 20027
chr1 38462442 38471278 - FHL3 ENSG00000183386.5 38471278 0.83 1.0 535 34712
chr1 38474930 38490496 + UTP11L ENSG00000183520.7 38474930 0.71 0.98 536 38364
chr1 38509523 38512450 - POU3F1 ENSG00000185668.5 38512450 0.9 1.0 537 75884
Expression level of Genes
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miRNAs possibly regulated by vista1239[chr1:38536566-38536896]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results