EnhancerDB
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  3. vista1242[chr1:38739267-38739533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1242[chr1:38739267-38739533]
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Tissue distribution of vista1242
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Transcription factor that possibly regulate vista1242[chr1:38739267-38739533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38739249 38739269 TP53 JASPAR yes 28209706
chr1 38739249 38739269 TP53 JASPAR yes 118274578
chr1 38739261 38739272 STAT3 JASPAR yes 28209707
chr1 38739261 38739272 STAT3 JASPAR yes 118274579
chr1 38739285 38739290 SP1 TRANSFAC yes 28209708
chr1 38739285 38739290 SP1 TRANSFAC yes 118274580
chr1 38739285 38739299 PLAG1 JASPAR yes 28209709
chr1 38739285 38739299 PLAG1 JASPAR yes 118274581
chr1 38739314 38739328 GLIS2 JASPAR yes 28209710
chr1 38739314 38739328 GLIS2 JASPAR yes 118274582
chr1 38739316 38739336 RREB1 JASPAR yes 28209711
chr1 38739316 38739336 RREB1 JASPAR yes 118274583
chr1 38739326 38739338 PKNOX2 JASPAR yes 28209712
chr1 38739326 38739338 PKNOX2 JASPAR yes 118274584
chr1 38739341 38739345 ESR1 TRANSFAC yes 28209713
chr1 38739341 38739345 ESR1 TRANSFAC yes 118274585
chr1 38739345 38739360 TFAP2C JASPAR yes 28209714
chr1 38739345 38739360 TFAP2C JASPAR yes 118274586
chr1 38739357 38739361 LFA1 TRANSFAC yes 28209715
chr1 38739357 38739361 LFA1 TRANSFAC yes 118274587
chr1 38739399 38739408 NFIX JASPAR yes 28209716
chr1 38739399 38739408 NFIX JASPAR yes 118274588
chr1 38739399 38739409 NFIA JASPAR yes 28209717
chr1 38739399 38739409 NFIA JASPAR yes 118274589
chr1 38739401 38739407 NFIC JASPAR yes 28209718
chr1 38739401 38739407 NFIC JASPAR yes 118274590
chr1 38739414 38739434 RREB1 JASPAR yes 28209719
chr1 38739414 38739434 RREB1 JASPAR yes 118274591
chr1 38739418 38739438 RREB1 JASPAR yes 28209720
chr1 38739418 38739438 RREB1 JASPAR yes 118274592
chr1 38739421 38739433 ZBTB7C JASPAR yes 28209721
chr1 38739421 38739433 ZBTB7C JASPAR yes 118274593
chr1 38739438 38739451 JUN JASPAR yes 28209722
chr1 38739438 38739451 JUN JASPAR yes 118274594
chr1 38739446 38739456 POU6F1 JASPAR yes 28209723
chr1 38739446 38739456 POU6F1 JASPAR yes 118274595
chr1 38739446 38739460 POU4F1 JASPAR yes 28209724
chr1 38739446 38739460 POU4F1 JASPAR yes 118274596
chr1 38739449 38739453 YY1 TRANSFAC yes 28209725
chr1 38739449 38739453 YY1 TRANSFAC yes 118274597
chr1 38739472 38739484 TAL1 JASPAR yes 28209726
chr1 38739472 38739484 TAL1 JASPAR yes 118274598
chr1 38739473 38739485 BHLHE23 JASPAR yes 28209727
chr1 38739473 38739485 BHLHE23 JASPAR yes 118274599
chr1 38739474 38739484 BHLHE22 JASPAR yes 28209728
chr1 38739474 38739484 NEUROD2 JASPAR yes 28209729
chr1 38739474 38739484 NEUROG2 JASPAR yes 28209730
chr1 38739474 38739484 OLIG1 JASPAR yes 28209731
chr1 38739474 38739484 OLIG2 JASPAR yes 28209732
chr1 38739474 38739484 OLIG3 JASPAR yes 28209733
chr1 38739474 38739484 BHLHE22 JASPAR yes 118274600
chr1 38739474 38739484 NEUROD2 JASPAR yes 118274601
chr1 38739474 38739484 NEUROG2 JASPAR yes 118274602
chr1 38739474 38739484 OLIG1 JASPAR yes 118274603
chr1 38739474 38739484 OLIG2 JASPAR yes 118274604
chr1 38739474 38739484 OLIG3 JASPAR yes 118274605
chr1 38739474 38739486 TAL1 JASPAR yes 28209734
chr1 38739474 38739486 TAL1 JASPAR yes 118274606
chr1 38739476 38739488 POU2F1 JASPAR yes 28209735
chr1 38739476 38739488 POU2F1 JASPAR yes 118274607
chr1 38739476 38739489 POU3F3 JASPAR yes 28209736
chr1 38739476 38739489 POU3F3 JASPAR yes 118274608
chr1 38739476 38739490 POU1F1 JASPAR yes 28209737
chr1 38739476 38739490 POU1F1 JASPAR yes 118274609
chr1 38739477 38739489 POU3F1 JASPAR yes 28209738
chr1 38739477 38739489 POU3F2 JASPAR yes 28209739
chr1 38739477 38739489 POU3F1 JASPAR yes 118274610
chr1 38739477 38739489 POU3F2 JASPAR yes 118274611
chr1 38739478 38739487 POU3F4 JASPAR yes 28209740
chr1 38739478 38739487 POU5F1B JASPAR yes 28209741
chr1 38739478 38739487 POU3F4 JASPAR yes 118274612
chr1 38739478 38739487 POU5F1B JASPAR yes 118274613
chr1 38739481 38739491 ESX1 JASPAR yes 28209742
chr1 38739481 38739491 RAX JASPAR yes 28209743
chr1 38739481 38739491 ESX1 JASPAR yes 118274614
chr1 38739481 38739491 RAX JASPAR yes 118274615
chr1 38739482 38739490 BARX1 JASPAR yes 28209744
chr1 38739482 38739490 BARX1 JASPAR yes 118274616
chr1 38739485 38739497 IRF1 JASPAR yes 28209745
chr1 38739485 38739497 IRF1 JASPAR yes 118274617
chr1 38739485 38739499 IRF7 JASPAR yes 28209746
chr1 38739485 38739499 IRF7 JASPAR yes 118274618
chr1 38739487 38739508 IRF1 JASPAR yes 28209747
chr1 38739487 38739508 IRF1 JASPAR yes 118274619
chr1 38739489 38739504 STAT2 JASPAR yes 28209748
chr1 38739489 38739504 STAT2 JASPAR yes 118274620
chr1 38739500 38739504 YY1 TRANSFAC yes 28209749
chr1 38739500 38739504 YY1 TRANSFAC yes 118274621
chr1 38739511 38739517 NFIC JASPAR yes 28209750
chr1 38739511 38739517 NFIC JASPAR yes 118274622
chr1 38739524 38739530 GATA3 JASPAR yes 28209751
chr1 38739524 38739530 GATA3 JASPAR yes 118274623
chr1 38739528 38739534 GATA3 JASPAR yes 28209752
chr1 38739528 38739534 GATA3 JASPAR yes 118274624
SNP sites on vista1242[chr1:38739267-38739533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38739269 rs543258683 G A
STAT3 TP53
242683
chr1 38739318 rs1329970 C G,T
GLIS2 RREB1
242684
chr1 38739450 rs377033645 CATTA C
JUN POU4F1 POU6F1 YY1
242685
chr1 38739450 rs71968149 CATTA C
JUN POU4F1 POU6F1 YY1
242686
chr1 38739454 rs1329971 A C
POU4F1 POU6F1
242687
chr1 38739494 rs1329972 T A
IRF1 IRF7 STAT2
242688
Genes possibly regulated by vista1242[chr1:38739267-38739533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1242[chr1:38739267-38739533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results