EnhancerDB
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  3. vista1243[chr1:38922036-38922121]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1243[chr1:38922036-38922121]
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Tissue distribution of vista1243
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Transcription factor that possibly regulate vista1243[chr1:38922036-38922121]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38922035 38922048 SMAD2 JASPAR yes 28219963
chr1 38922035 38922048 SMAD2 JASPAR yes 118274625
chr1 38922061 38922076 PRDM1 JASPAR yes 28219964
chr1 38922061 38922076 PRDM1 JASPAR yes 118274626
chr1 38922085 38922102 BCL6B JASPAR yes 28219965
chr1 38922085 38922102 BCL6B JASPAR yes 118274627
chr1 38922090 38922100 NFIA JASPAR yes 28219966
chr1 38922090 38922100 NFIA JASPAR yes 118274628
chr1 38922091 38922100 NFIX JASPAR yes 28219967
chr1 38922091 38922100 NFIX JASPAR yes 118274629
chr1 38922092 38922098 NFIC JASPAR yes 28219968
chr1 38922092 38922098 NFIC JASPAR yes 118274630
chr1 38922096 38922104 HOXA5 JASPAR yes 28219969
chr1 38922096 38922104 HOXA5 JASPAR yes 118274631
chr1 38922097 38922107 ALX3 JASPAR yes 28219970
chr1 38922097 38922107 EMX1 JASPAR yes 28219971
chr1 38922097 38922107 EMX2 JASPAR yes 28219972
chr1 38922097 38922107 ESX1 JASPAR yes 28219973
chr1 38922097 38922107 GBX1 JASPAR yes 28219974
chr1 38922097 38922107 GSX1 JASPAR yes 28219975
chr1 38922097 38922107 GSX2 JASPAR yes 28219976
chr1 38922097 38922107 HOXA2 JASPAR yes 28219977
chr1 38922097 38922107 HOXB2 JASPAR yes 28219978
chr1 38922097 38922107 LHX2 JASPAR yes 28219979
chr1 38922097 38922107 LHX6 JASPAR yes 28219980
chr1 38922097 38922107 MEOX1 JASPAR yes 28219981
chr1 38922097 38922107 NOTO JASPAR yes 28219982
chr1 38922097 38922107 ALX3 JASPAR yes 118274632
chr1 38922097 38922107 EMX1 JASPAR yes 118274633
chr1 38922097 38922107 EMX2 JASPAR yes 118274634
chr1 38922097 38922107 ESX1 JASPAR yes 118274635
chr1 38922097 38922107 GBX1 JASPAR yes 118274636
chr1 38922097 38922107 GSX1 JASPAR yes 118274637
chr1 38922097 38922107 GSX2 JASPAR yes 118274638
chr1 38922097 38922107 HOXA2 JASPAR yes 118274639
chr1 38922097 38922107 HOXB2 JASPAR yes 118274640
chr1 38922097 38922107 LHX2 JASPAR yes 118274641
chr1 38922097 38922107 LHX6 JASPAR yes 118274642
chr1 38922097 38922107 MEOX1 JASPAR yes 118274643
chr1 38922097 38922107 NOTO JASPAR yes 118274644
chr1 38922098 38922106 DLX6 JASPAR yes 28219983
chr1 38922098 38922106 EN1 JASPAR yes 28219984
chr1 38922098 38922106 LBX1 JASPAR yes 28219985
chr1 38922098 38922106 PAX4 JASPAR yes 28219986
chr1 38922098 38922106 PDX1 JASPAR yes 28219987
chr1 38922098 38922106 VAX1 JASPAR yes 28219988
chr1 38922098 38922106 VAX2 JASPAR yes 28219989
chr1 38922098 38922106 VSX1 JASPAR yes 28219990
chr1 38922098 38922106 VSX2 JASPAR yes 28219991
chr1 38922098 38922106 DLX6 JASPAR yes 118274645
chr1 38922098 38922106 EN1 JASPAR yes 118274646
chr1 38922098 38922106 LBX1 JASPAR yes 118274647
chr1 38922098 38922106 PAX4 JASPAR yes 118274648
chr1 38922098 38922106 PDX1 JASPAR yes 118274649
chr1 38922098 38922106 VAX1 JASPAR yes 118274650
chr1 38922098 38922106 VAX2 JASPAR yes 118274651
chr1 38922098 38922106 VSX1 JASPAR yes 118274652
chr1 38922098 38922106 VSX2 JASPAR yes 118274653
SNP sites on vista1243[chr1:38922036-38922121]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38922036 rs145762808 C T
SMAD2
243746
chr1 38922053 rs2251803 A G no 243747
chr1 38922089 rs114340252 G A
BCL6B
243748
Genes possibly regulated by vista1243[chr1:38922036-38922121]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1243[chr1:38922036-38922121]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results