EnhancerDB
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  3. vista1248[chr1:39327096-39327575]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1248[chr1:39327096-39327575]
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Tissue distribution of vista1248
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Transcription factor that possibly regulate vista1248[chr1:39327096-39327575]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39327131 39327139 UEF1 TRANSFAC yes 118274778
chr1 39327132 39327140 MEIS2 JASPAR yes 118274779
chr1 39327132 39327140 MEIS3 JASPAR yes 118274780
chr1 39327165 39327169 YY1 TRANSFAC yes 118274781
chr1 39327166 39327178 HNF1B JASPAR yes 118274782
chr1 39327188 39327193 ETS2 TRANSFAC yes 118274783
chr1 39327221 39327225 NFE TRANSFAC yes 118274784
chr1 39327242 39327255 POU2F2 JASPAR yes 118274785
chr1 39327261 39327275 GATA2 JASPAR yes 118274786
chr1 39327265 39327273 GATA3 JASPAR yes 118274787
chr1 39327276 39327280 NFE TRANSFAC yes 118274788
chr1 39327276 39327283 MEIS1 JASPAR yes 118274789
chr1 39327281 39327301 TP63 JASPAR yes 118274790
chr1 39327282 39327300 TP53 JASPAR yes 118274791
chr1 39327282 39327300 TP63 JASPAR yes 118274792
chr1 39327311 39327327 SOX4 JASPAR yes 118274793
chr1 39327312 39327322 NKX2-3 JASPAR yes 118274794
chr1 39327312 39327327 SOX21 JASPAR yes 118274795
chr1 39327312 39327328 SOX4 JASPAR yes 118274796
chr1 39327313 39327322 NKX2-8 JASPAR yes 118274797
chr1 39327321 39327336 RFX5 JASPAR yes 118274798
chr1 39327323 39327339 RFX5 JASPAR yes 118274799
chr1 39327334 39327337 MYB TRANSFAC yes 118274800
chr1 39327340 39327361 IRF1 JASPAR yes 118274801
chr1 39327343 39327364 IRF1 JASPAR yes 118274802
chr1 39327344 39327359 FOXP1 JASPAR yes 118274803
chr1 39327344 39327365 IRF1 JASPAR yes 118274804
chr1 39327345 39327360 FOXP1 JASPAR yes 118274805
chr1 39327345 39327366 IRF1 JASPAR yes 118274806
chr1 39327346 39327361 FOXP1 JASPAR yes 118274807
chr1 39327346 39327367 IRF1 JASPAR yes 118274808
chr1 39327347 39327362 FOXP1 JASPAR yes 118274809
chr1 39327347 39327368 IRF1 JASPAR yes 118274810
chr1 39327348 39327363 FOXP1 JASPAR yes 118274811
chr1 39327348 39327369 IRF1 JASPAR yes 118274812
chr1 39327349 39327364 FOXP1 JASPAR yes 118274813
chr1 39327349 39327370 IRF1 JASPAR yes 118274814
chr1 39327350 39327365 FOXP1 JASPAR yes 118274815
chr1 39327350 39327371 IRF1 JASPAR yes 118274816
chr1 39327351 39327366 FOXP1 JASPAR yes 118274817
chr1 39327351 39327372 IRF1 JASPAR yes 118274818
chr1 39327352 39327367 FOXP1 JASPAR yes 118274819
chr1 39327352 39327373 IRF1 JASPAR yes 118274820
chr1 39327353 39327368 FOXP1 JASPAR yes 118274821
chr1 39327353 39327374 IRF1 JASPAR yes 118274822
chr1 39327354 39327369 FOXP1 JASPAR yes 118274823
chr1 39327354 39327375 IRF1 JASPAR yes 118274824
chr1 39327355 39327370 FOXP1 JASPAR yes 118274825
chr1 39327356 39327371 FOXP1 JASPAR yes 118274826
chr1 39327357 39327372 FOXP1 JASPAR yes 118274827
chr1 39327358 39327373 FOXP1 JASPAR yes 118274828
chr1 39327359 39327374 FOXP1 JASPAR yes 118274829
chr1 39327360 39327375 FOXP1 JASPAR yes 118274830
chr1 39327361 39327376 FOXP1 JASPAR yes 118274831
chr1 39327362 39327377 FOXP1 JASPAR yes 118274832
chr1 39327389 39327404 RFX5 JASPAR yes 28239564
chr1 39327389 39327404 RFX5 JASPAR yes 118274833
chr1 39327390 39327394 NFE TRANSFAC yes 28239565
chr1 39327390 39327394 NFE TRANSFAC yes 118274834
chr1 39327421 39327431 SREBF1 JASPAR yes 28239566
chr1 39327421 39327431 SREBF1 JASPAR yes 118274835
chr1 39327423 39327440 ESR1 JASPAR yes 28239567
chr1 39327423 39327440 ESR1 JASPAR yes 118274836
chr1 39327493 39327502 SNAI2 JASPAR yes 28239568
chr1 39327493 39327502 SNAI2 JASPAR yes 118274837
chr1 39327493 39327503 ID4 JASPAR yes 28239569
chr1 39327493 39327503 TCF3 JASPAR yes 28239570
chr1 39327493 39327503 TCF4 JASPAR yes 28239571
chr1 39327493 39327503 ID4 JASPAR yes 118274838
chr1 39327493 39327503 TCF3 JASPAR yes 118274839
chr1 39327493 39327503 TCF4 JASPAR yes 118274840
chr1 39327498 39327507 HIC2 JASPAR yes 28239572
chr1 39327498 39327507 HIC2 JASPAR yes 118274841
chr1 39327503 39327523 RREB1 JASPAR yes 28239573
chr1 39327503 39327523 RREB1 JASPAR yes 118274842
chr1 39327519 39327530 PROP1 JASPAR yes 28239574
chr1 39327519 39327530 PROP1 JASPAR yes 118274843
chr1 39327519 39327540 IRF1 JASPAR yes 28239575
chr1 39327519 39327540 IRF1 JASPAR yes 118274844
chr1 39327521 39327536 FOXP1 JASPAR yes 28239576
chr1 39327521 39327536 FOXP1 JASPAR yes 118274845
chr1 39327524 39327539 MEF2A JASPAR yes 28239577
chr1 39327524 39327539 MEF2A JASPAR yes 118274846
chr1 39327525 39327540 MEF2C JASPAR yes 28239578
chr1 39327525 39327540 MEF2C JASPAR yes 118274847
chr1 39327526 39327538 MEF2A JASPAR yes 28239579
chr1 39327526 39327538 MEF2B JASPAR yes 28239580
chr1 39327526 39327538 MEF2D JASPAR yes 28239581
chr1 39327526 39327538 MEF2A JASPAR yes 118274848
chr1 39327526 39327538 MEF2B JASPAR yes 118274849
chr1 39327526 39327538 MEF2D JASPAR yes 118274850
chr1 39327527 39327537 MEF2A JASPAR yes 28239582
chr1 39327527 39327537 MEF2A JASPAR yes 118274851
chr1 39327528 39327532 YY1 TRANSFAC yes 28239583
chr1 39327528 39327532 YY1 TRANSFAC yes 118274852
chr1 39327543 39327556 NFKB1 JASPAR yes 28239584
chr1 39327543 39327556 NFKB1 JASPAR yes 118274853
chr1 39327549 39327561 YY1 JASPAR yes 28239585
chr1 39327549 39327561 YY1 JASPAR yes 118274854
chr1 39327568 39327582 GATA2 JASPAR yes 28239586
chr1 39327568 39327582 GATA2 JASPAR yes 118274855
chr1 39327574 39327578 NFE TRANSFAC yes 28239587
chr1 39327574 39327578 NFE TRANSFAC yes 118274856
chr1 39327574 39327579 GATA1 TRANSFAC yes 28239588
chr1 39327574 39327579 GATA1 TRANSFAC yes 118274857
chr1 39327574 39327580 GATA3 JASPAR yes 28239589
chr1 39327574 39327580 GATA3 JASPAR yes 118274858
SNP sites on vista1248[chr1:39327096-39327575]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39327176 rs145402487 T G
HNF1B
245790
chr1 39327256 rs61780037 T C no 245791
chr1 39327308 rs78483042 G A no 245792
chr1 39327345 rs556196583 A ATTTT
FOXP1 IRF1
245793
chr1 39327441 rs113711397 T C no 245794
chr1 39327442 rs375211290 A G no 245795
chr1 39327458 rs555281973 C A no 245796
chr1 39327488 rs575545623 T A no 245797
chr1 39327513 rs372183293 A G
RREB1
245798
chr1 39327517 rs578018484 G C
RREB1
245799
Genes possibly regulated by vista1248[chr1:39327096-39327575]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39303870 39325495 - RRAGC ENSG00000116954.7 39325495 0.61 0.99 538 98399
chr1 39328636 39347289 - MYCBP ENSG00000214114.4 39347289 0.91 0.98 539 80286
chr1 39330175 39347289 - GJA9 ENSG00000131233.8 39347289 0.94 0.95 540 80286
chr1 39351479 39407471 - RHBDL2 ENSG00000158315.6 39407471 0.86 0.9 541 20104
Expression level of Genes
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miRNAs possibly regulated by vista1248[chr1:39327096-39327575]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results