EnhancerDB
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  3. vista1249[chr1:39357087-39357474]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1249[chr1:39357087-39357474]
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Tissue distribution of vista1249
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Transcription factor that possibly regulate vista1249[chr1:39357087-39357474]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39357120 39357126 HiNF-A TRANSFAC yes 28240630
chr1 39357120 39357126 HiNF-A TRANSFAC yes 118274859
chr1 39357149 39357154 GATA1 TRANSFAC yes 28240631
chr1 39357149 39357154 GATA1 TRANSFAC yes 118274860
chr1 39357153 39357163 SREBF2 JASPAR yes 28240632
chr1 39357153 39357163 SREBF2 JASPAR yes 118274861
chr1 39357153 39357164 USF2 JASPAR yes 28240633
chr1 39357153 39357164 USF2 JASPAR yes 118274862
chr1 39357176 39357193 NR3C2 JASPAR yes 28240634
chr1 39357176 39357193 NR3C2 JASPAR yes 118274863
chr1 39357178 39357193 AR JASPAR yes 28240635
chr1 39357178 39357193 AR JASPAR yes 118274864
chr1 39357200 39357208 MGA JASPAR yes 28240636
chr1 39357200 39357208 TBX15 JASPAR yes 28240637
chr1 39357200 39357208 TBX1 JASPAR yes 28240638
chr1 39357200 39357208 TBX4 JASPAR yes 28240639
chr1 39357200 39357208 TBX5 JASPAR yes 28240640
chr1 39357200 39357208 MGA JASPAR yes 118274865
chr1 39357200 39357208 TBX15 JASPAR yes 118274866
chr1 39357200 39357208 TBX1 JASPAR yes 118274867
chr1 39357200 39357208 TBX4 JASPAR yes 118274868
chr1 39357200 39357208 TBX5 JASPAR yes 118274869
chr1 39357203 39357214 ESRRA JASPAR yes 28240641
chr1 39357203 39357214 ESRRB JASPAR yes 28240642
chr1 39357203 39357214 ESRRA JASPAR yes 118274870
chr1 39357203 39357214 ESRRB JASPAR yes 118274871
chr1 39357205 39357215 RORA JASPAR yes 28240643
chr1 39357205 39357215 RORA JASPAR yes 118274872
chr1 39357267 39357282 PRDM1 JASPAR yes 28240644
chr1 39357267 39357282 PRDM1 JASPAR yes 118274873
chr1 39357278 39357284 MYC TRANSFAC yes 28240645
chr1 39357278 39357284 MYC TRANSFAC yes 118274874
chr1 39357289 39357303 POU4F1 JASPAR yes 28240646
chr1 39357289 39357303 POU4F1 JASPAR yes 118274875
chr1 39357289 39357305 POU4F3 JASPAR yes 28240647
chr1 39357289 39357305 POU4F3 JASPAR yes 118274876
chr1 39357310 39357325 MEF2C JASPAR yes 28240648
chr1 39357310 39357325 MEF2C JASPAR yes 118274877
chr1 39357311 39357326 MEF2A JASPAR yes 28240649
chr1 39357311 39357326 MEF2A JASPAR yes 118274878
chr1 39357323 39357327 TEAD2 TRANSFAC yes 28240650
chr1 39357323 39357327 TEAD2 TRANSFAC yes 118274879
chr1 39357323 39357328 TBP TRANSFAC yes 28240651
chr1 39357323 39357328 TBP TRANSFAC yes 118274880
chr1 39357326 39357341 FOXP1 JASPAR yes 28240652
chr1 39357326 39357341 FOXP1 JASPAR yes 118274881
chr1 39357329 39357340 FOXP2 JASPAR yes 28240653
chr1 39357329 39357340 FOXP2 JASPAR yes 118274882
chr1 39357330 39357334 TEAD2 TRANSFAC yes 28240654
chr1 39357330 39357334 TEAD2 TRANSFAC yes 118274883
chr1 39357330 39357335 TBP TRANSFAC yes 28240655
chr1 39357330 39357335 TBP TRANSFAC yes 118274884
chr1 39357331 39357339 FOXG1 JASPAR yes 28240656
chr1 39357331 39357339 FOXO3 JASPAR yes 28240657
chr1 39357331 39357339 FOXG1 JASPAR yes 118274885
chr1 39357331 39357339 FOXO3 JASPAR yes 118274886
chr1 39357333 39357349 SOX4 JASPAR yes 28240658
chr1 39357333 39357349 SOX4 JASPAR yes 118274887
chr1 39357343 39357357 GATA2 JASPAR yes 28240659
chr1 39357343 39357357 GATA2 JASPAR yes 118274888
chr1 39357345 39357349 YY1 TRANSFAC yes 28240660
chr1 39357345 39357349 YY1 TRANSFAC yes 118274889
chr1 39357347 39357355 GATA3 JASPAR yes 28240661
chr1 39357347 39357355 GATA3 JASPAR yes 118274890
chr1 39357359 39357371 HNF1B JASPAR yes 28240662
chr1 39357359 39357371 HNF1B JASPAR yes 118274891
chr1 39357376 39357386 MEF2A JASPAR yes 28240663
chr1 39357376 39357386 MEF2A JASPAR yes 118274892
chr1 39357377 39357389 POU2F1 JASPAR yes 28240664
chr1 39357377 39357389 POU2F1 JASPAR yes 118274893
chr1 39357379 39357383 YY1 TRANSFAC yes 28240665
chr1 39357379 39357383 YY1 TRANSFAC yes 118274894
chr1 39357379 39357388 POU5F1B JASPAR yes 28240666
chr1 39357379 39357388 POU5F1B JASPAR yes 118274895
chr1 39357388 39357392 ESR1 TRANSFAC yes 28240667
chr1 39357388 39357392 ESR1 TRANSFAC yes 118274896
chr1 39357407 39357417 SP1 JASPAR yes 28240668
chr1 39357407 39357417 SP1 JASPAR yes 118274897
chr1 39357433 39357444 STAT1 JASPAR yes 28240669
chr1 39357433 39357444 STAT1 JASPAR yes 118274898
chr1 39357443 39357448 TFAP2A TRANSFAC yes 28240670
chr1 39357443 39357448 TFAP2A TRANSFAC yes 118274899
chr1 39357443 39357449 MZF1 JASPAR yes 28240671
chr1 39357443 39357449 MZF1 JASPAR yes 118274900
chr1 39357446 39357451 GATA2 JASPAR yes 28240672
chr1 39357446 39357451 GATA2 JASPAR yes 118274901
chr1 39357468 39357479 CEBPB JASPAR yes 28240673
chr1 39357468 39357479 CEBPB JASPAR yes 118274902
chr1 39357469 39357479 CEBPB JASPAR yes 28240674
chr1 39357469 39357479 CEBPD JASPAR yes 28240675
chr1 39357469 39357479 CEBPE JASPAR yes 28240676
chr1 39357469 39357479 CEBPB JASPAR yes 118274903
chr1 39357469 39357479 CEBPD JASPAR yes 118274904
chr1 39357469 39357479 CEBPE JASPAR yes 118274905
chr1 39357469 39357480 CEBPA JASPAR yes 28240677
chr1 39357469 39357480 CEBPA JASPAR yes 118274906
SNP sites on vista1249[chr1:39357087-39357474]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39357157 rs6674910 A G
SREBF2 USF2
245909
chr1 39357219 rs75998891 C A no 245910
chr1 39357361 rs74064941 T A,C
HNF1B
245911
chr1 39357459 rs542961078 C A no 245912
Genes possibly regulated by vista1249[chr1:39357087-39357474]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39303870 39325495 - RRAGC ENSG00000116954.7 39325495 0.61 0.99 538 68408
chr1 39328636 39347289 - MYCBP ENSG00000214114.4 39347289 0.91 0.98 539 90202
chr1 39330175 39347289 - GJA9 ENSG00000131233.8 39347289 0.94 0.95 540 90202
chr1 39351479 39407471 - RHBDL2 ENSG00000158315.6 39407471 0.86 0.9 541 50003
chr1 39456895 39471731 + AKIRIN1 ENSG00000174574.11 39456895 0.69 0.99 542 579
Expression level of Genes
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miRNAs possibly regulated by vista1249[chr1:39357087-39357474]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results