EnhancerDB
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  3. vista1251[chr1:39509536-39509726]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1251[chr1:39509536-39509726]
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Tissue distribution of vista1251
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Transcription factor that possibly regulate vista1251[chr1:39509536-39509726]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39509536 39509546 RORA JASPAR yes 28248246
chr1 39509536 39509546 RORA JASPAR yes 118274956
chr1 39509537 39509548 ESRRA JASPAR yes 28248247
chr1 39509537 39509548 ESRRB JASPAR yes 28248248
chr1 39509537 39509548 ESRRA JASPAR yes 118274957
chr1 39509537 39509548 ESRRB JASPAR yes 118274958
chr1 39509537 39509550 NR2F1 JASPAR yes 28248249
chr1 39509537 39509550 NR2F1 JASPAR yes 118274959
chr1 39509539 39509547 NR4A2 JASPAR yes 28248250
chr1 39509539 39509547 NR4A2 JASPAR yes 118274960
chr1 39509539 39509557 RARA JASPAR yes 28248251
chr1 39509539 39509557 RARA JASPAR yes 118274961
chr1 39509541 39509545 ESR1 TRANSFAC yes 28248252
chr1 39509541 39509545 ESR1 TRANSFAC yes 118274962
chr1 39509567 39509579 YY1 JASPAR yes 28248253
chr1 39509567 39509579 YY1 JASPAR yes 118274963
chr1 39509571 39509582 CEBPB JASPAR yes 28248254
chr1 39509571 39509582 CEBPB JASPAR yes 118274964
chr1 39509572 39509585 NFKB1 JASPAR yes 28248255
chr1 39509572 39509585 NFKB2 JASPAR yes 28248256
chr1 39509572 39509585 NFKB1 JASPAR yes 118274965
chr1 39509572 39509585 NFKB2 JASPAR yes 118274966
chr1 39509577 39509588 DUX4 JASPAR yes 28248257
chr1 39509577 39509588 DUX4 JASPAR yes 118274967
chr1 39509588 39509603 MEF2C JASPAR yes 28248258
chr1 39509588 39509603 MEF2C JASPAR yes 118274968
chr1 39509589 39509604 MEF2A JASPAR yes 28248259
chr1 39509589 39509604 MEF2A JASPAR yes 118274969
chr1 39509590 39509602 MEF2A JASPAR yes 28248260
chr1 39509590 39509602 MEF2B JASPAR yes 28248261
chr1 39509590 39509602 MEF2D JASPAR yes 28248262
chr1 39509590 39509602 MEF2A JASPAR yes 118274970
chr1 39509590 39509602 MEF2B JASPAR yes 118274971
chr1 39509590 39509602 MEF2D JASPAR yes 118274972
chr1 39509612 39509632 TP63 JASPAR yes 28248263
chr1 39509612 39509632 TP63 JASPAR yes 118274973
chr1 39509613 39509631 TP53 JASPAR yes 28248264
chr1 39509613 39509631 TP63 JASPAR yes 28248265
chr1 39509613 39509631 TP73 JASPAR yes 28248266
chr1 39509613 39509631 TP53 JASPAR yes 118274974
chr1 39509613 39509631 TP63 JASPAR yes 118274975
chr1 39509613 39509631 TP73 JASPAR yes 118274976
chr1 39509615 39509630 TP53 JASPAR yes 28248267
chr1 39509615 39509630 TP53 JASPAR yes 118274977
chr1 39509617 39509627 NFIA JASPAR yes 28248268
chr1 39509617 39509627 NFIA JASPAR yes 118274978
chr1 39509617 39509628 FOXA1 JASPAR yes 28248269
chr1 39509617 39509628 FOXA1 JASPAR yes 118274979
chr1 39509618 39509627 NFIX JASPAR yes 28248270
chr1 39509618 39509627 NFIX JASPAR yes 118274980
chr1 39509619 39509625 NFIC JASPAR yes 28248271
chr1 39509619 39509625 NFIC JASPAR yes 118274981
chr1 39509620 39509632 HES5 JASPAR yes 28248272
chr1 39509620 39509632 HES7 JASPAR yes 28248273
chr1 39509620 39509632 PKNOX2 JASPAR yes 28248274
chr1 39509620 39509632 HES5 JASPAR yes 118274982
chr1 39509620 39509632 HES7 JASPAR yes 118274983
chr1 39509620 39509632 PKNOX2 JASPAR yes 118274984
chr1 39509631 39509635 TEAD2 TRANSFAC yes 28248275
chr1 39509631 39509635 TEAD2 TRANSFAC yes 118274985
chr1 39509632 39509640 RHOXF1 JASPAR yes 28248276
chr1 39509632 39509640 RHOXF1 JASPAR yes 118274986
chr1 39509681 39509691 SP1 JASPAR yes 28248277
chr1 39509681 39509691 SP1 JASPAR yes 118274987
chr1 39509681 39509702 ZNF263 JASPAR yes 28248278
chr1 39509681 39509702 ZNF263 JASPAR yes 118274988
chr1 39509683 39509688 SP1 TRANSFAC yes 28248279
chr1 39509683 39509688 SP1 TRANSFAC yes 118274989
chr1 39509683 39509695 HINFP JASPAR yes 28248280
chr1 39509683 39509695 HINFP JASPAR yes 118274990
chr1 39509692 39509706 MTF1 JASPAR yes 28248281
chr1 39509692 39509706 MTF1 JASPAR yes 118274991
SNP sites on vista1251[chr1:39509536-39509726]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39509550 rs143114914 G A
NR2F1 RARA
246875
chr1 39509566 rs113275861 G C no 246876
chr1 39509567 rs141417951 C T
YY1
246877
chr1 39509615 rs112009749 G A
TP53 TP63 TP73
246878
Genes possibly regulated by vista1251[chr1:39509536-39509726]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39456895 39471731 + AKIRIN1 ENSG00000174574.11 39456895 0.69 0.99 542 47359
chr1 39491990 39500308 + NDUFS5 ENSG00000168653.6 39491990 0.66 0.99 543 82454
chr1 39546988 39952849 + MACF1 ENSG00000127603.19 39546988 0.86 0.99 544 62738
Expression level of Genes
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miRNAs possibly regulated by vista1251[chr1:39509536-39509726]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results