EnhancerDB
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  3. vista1252[chr1:39516193-39516422]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1252[chr1:39516193-39516422]
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Tissue distribution of vista1252
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Transcription factor that possibly regulate vista1252[chr1:39516193-39516422]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39516193 39516208 FOXP1 JASPAR yes 28249049
chr1 39516193 39516208 FOXP1 JASPAR yes 118274992
chr1 39516194 39516215 IRF1 JASPAR yes 28249050
chr1 39516194 39516215 IRF1 JASPAR yes 118274993
chr1 39516195 39516215 RREB1 JASPAR yes 28249051
chr1 39516195 39516215 RREB1 JASPAR yes 118274994
chr1 39516196 39516207 FOXP2 JASPAR yes 28249052
chr1 39516196 39516207 FOXP2 JASPAR yes 118274995
chr1 39516200 39516215 FOXP1 JASPAR yes 28249053
chr1 39516200 39516215 FOXP1 JASPAR yes 118274996
chr1 39516200 39516221 IRF1 JASPAR yes 28249054
chr1 39516200 39516221 IRF1 JASPAR yes 118274997
chr1 39516221 39516230 HIC2 JASPAR yes 28249055
chr1 39516221 39516230 HIC2 JASPAR yes 118274998
chr1 39516224 39516228 LFA1 TRANSFAC yes 28249056
chr1 39516224 39516228 LFA1 TRANSFAC yes 118274999
chr1 39516224 39516244 TP63 JASPAR yes 28249057
chr1 39516224 39516244 TP63 JASPAR yes 118275000
chr1 39516225 39516243 TP53 JASPAR yes 28249058
chr1 39516225 39516243 TP73 JASPAR yes 28249059
chr1 39516225 39516243 TP53 JASPAR yes 118275001
chr1 39516225 39516243 TP73 JASPAR yes 118275002
chr1 39516227 39516242 TP53 JASPAR yes 28249060
chr1 39516227 39516242 TP53 JASPAR yes 118275003
chr1 39516246 39516250 H4TF2 TRANSFAC yes 28249061
chr1 39516246 39516250 H4TF2 TRANSFAC yes 118275004
chr1 39516278 39516293 TFAP2A JASPAR yes 28249062
chr1 39516278 39516293 TFAP2C JASPAR yes 28249063
chr1 39516278 39516293 TFAP2A JASPAR yes 118275005
chr1 39516278 39516293 TFAP2C JASPAR yes 118275006
chr1 39516286 39516304 RARA JASPAR yes 28249064
chr1 39516286 39516304 RARA JASPAR yes 118275007
chr1 39516304 39516318 JUN JASPAR yes 28249065
chr1 39516304 39516318 JUN JASPAR yes 118275008
chr1 39516307 39516318 FOSL2 JASPAR yes 28249066
chr1 39516307 39516318 JUNB JASPAR yes 28249067
chr1 39516307 39516318 FOSL2 JASPAR yes 118275009
chr1 39516307 39516318 JUNB JASPAR yes 118275010
chr1 39516308 39516319 FOS JASPAR yes 28249068
chr1 39516308 39516319 FOSL1 JASPAR yes 28249069
chr1 39516308 39516319 JUND JASPAR yes 28249070
chr1 39516308 39516319 NFE2 JASPAR yes 28249071
chr1 39516308 39516319 FOS JASPAR yes 118275011
chr1 39516308 39516319 FOSL1 JASPAR yes 118275012
chr1 39516308 39516319 JUND JASPAR yes 118275013
chr1 39516308 39516319 NFE2 JASPAR yes 118275014
chr1 39516309 39516318 JDP2 JASPAR yes 28249072
chr1 39516309 39516318 JDP2 JASPAR yes 118275015
chr1 39516309 39516320 FOSL2 JASPAR yes 28249073
chr1 39516309 39516320 JUNB JASPAR yes 28249074
chr1 39516309 39516320 FOSL2 JASPAR yes 118275016
chr1 39516309 39516320 JUNB JASPAR yes 118275017
chr1 39516309 39516323 JUN JASPAR yes 28249075
chr1 39516309 39516323 JUN JASPAR yes 118275018
chr1 39516310 39516321 BATF JASPAR yes 28249076
chr1 39516310 39516321 BATF JASPAR yes 118275019
chr1 39516357 39516361 NFE TRANSFAC yes 28249077
chr1 39516357 39516361 NFE TRANSFAC yes 118275020
chr1 39516358 39516363 GATA2 JASPAR yes 28249078
chr1 39516358 39516363 GATA2 JASPAR yes 118275021
chr1 39516368 39516372 YY1 TRANSFAC yes 28249079
chr1 39516368 39516372 YY1 TRANSFAC yes 118275022
chr1 39516390 39516394 TEAD2 TRANSFAC yes 28249080
chr1 39516390 39516394 TEAD2 TRANSFAC yes 118275023
chr1 39516392 39516395 MYB TRANSFAC yes 28249081
chr1 39516392 39516395 MYB TRANSFAC yes 118275024
SNP sites on vista1252[chr1:39516193-39516422]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39516204 rs200058934 C CA
FOXP1 FOXP2 IRF1 RREB1
246978
chr1 39516360 rs79427648 A G
GATA2 NFE
246979
Genes possibly regulated by vista1252[chr1:39516193-39516422]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39456895 39471731 + AKIRIN1 ENSG00000174574.11 39456895 0.69 0.99 542 40702
chr1 39491990 39500308 + NDUFS5 ENSG00000168653.6 39491990 0.66 0.99 543 75797
chr1 39546988 39952849 + MACF1 ENSG00000127603.19 39546988 0.86 0.99 544 69434
Expression level of Genes
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miRNAs possibly regulated by vista1252[chr1:39516193-39516422]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results