EnhancerDB
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  3. vista1254[chr1:39552835-39552967]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1254[chr1:39552835-39552967]
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Tissue distribution of vista1254
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Transcription factor that possibly regulate vista1254[chr1:39552835-39552967]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39552846 39552856 GSX2 JASPAR yes 28249387
chr1 39552846 39552856 GSX2 JASPAR yes 118275049
chr1 39552847 39552855 BARX1 JASPAR yes 28249388
chr1 39552847 39552855 BARX1 JASPAR yes 118275050
chr1 39552856 39552862 PEA3 TRANSFAC yes 28249389
chr1 39552856 39552862 PEA3 TRANSFAC yes 118275051
chr1 39552856 39552867 FLI1 JASPAR yes 28249390
chr1 39552856 39552867 FLI1 JASPAR yes 118275052
chr1 39552857 39552865 FEV JASPAR yes 28249391
chr1 39552857 39552865 FEV JASPAR yes 118275053
chr1 39552884 39552897 ZBTB18 JASPAR yes 28249392
chr1 39552884 39552897 ZBTB18 JASPAR yes 118275054
chr1 39552884 39552904 TP63 JASPAR yes 28249393
chr1 39552884 39552904 TP63 JASPAR yes 118275055
chr1 39552886 39552896 MSC JASPAR yes 28249394
chr1 39552886 39552896 MSC JASPAR yes 118275056
chr1 39552910 39552920 SP1 JASPAR yes 28249395
chr1 39552910 39552920 SP1 JASPAR yes 118275057
chr1 39552913 39552925 INSM1 JASPAR yes 28249396
chr1 39552913 39552925 INSM1 JASPAR yes 118275058
chr1 39552934 39552948 PLAG1 JASPAR yes 28249397
chr1 39552934 39552948 PLAG1 JASPAR yes 118275059
chr1 39552942 39552952 ZNF740 JASPAR yes 28249398
chr1 39552942 39552952 ZNF740 JASPAR yes 118275060
chr1 39552952 39552963 FOSL2 JASPAR yes 28249399
chr1 39552952 39552963 JUNB JASPAR yes 28249400
chr1 39552952 39552963 FOSL2 JASPAR yes 118275061
chr1 39552952 39552963 JUNB JASPAR yes 118275062
chr1 39552952 39552966 JUN JASPAR yes 28249401
chr1 39552952 39552966 JUN JASPAR yes 118275063
chr1 39552953 39552959 JUN TRANSFAC yes 28249402
chr1 39552953 39552959 JUN TRANSFAC yes 118275064
chr1 39552959 39552971 E2F8 JASPAR yes 28249403
chr1 39552959 39552971 E2F8 JASPAR yes 118275065
SNP sites on vista1254[chr1:39552835-39552967]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39552963 rs72634502 C T
E2F8 FOSL2 JUN JUNB
247089
Genes possibly regulated by vista1254[chr1:39552835-39552967]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39456895 39471731 + AKIRIN1 ENSG00000174574.11 39456895 0.69 0.99 542 4060
chr1 39491990 39500308 + NDUFS5 ENSG00000168653.6 39491990 0.66 0.99 543 39155
chr1 39546988 39952849 + MACF1 ENSG00000127603.19 39546988 0.86 0.99 544 94153
Expression level of Genes
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miRNAs possibly regulated by vista1254[chr1:39552835-39552967]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results