EnhancerDB
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  3. vista1256[chr1:39596184-39596482]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1256[chr1:39596184-39596482]
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Tissue distribution of vista1256
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Transcription factor that possibly regulate vista1256[chr1:39596184-39596482]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39596214 39596223 SOX9 JASPAR yes 28255387
chr1 39596214 39596223 SOX9 JASPAR yes 118275108
chr1 39596238 39596248 RUNX3 JASPAR yes 28255388
chr1 39596238 39596248 RUNX3 JASPAR yes 118275109
chr1 39596239 39596248 RUNX2 JASPAR yes 28255389
chr1 39596239 39596248 RUNX2 JASPAR yes 118275110
chr1 39596254 39596261 SPI1 JASPAR yes 28255390
chr1 39596254 39596261 SPI1 JASPAR yes 118275111
chr1 39596260 39596278 MAFF JASPAR yes 28255391
chr1 39596260 39596278 MAFF JASPAR yes 118275112
chr1 39596263 39596277 JUN JASPAR yes 28255392
chr1 39596263 39596277 JUN JASPAR yes 118275113
chr1 39596265 39596276 BATF JASPAR yes 28255393
chr1 39596265 39596276 BATF JASPAR yes 118275114
chr1 39596330 39596335 GATA2 JASPAR yes 28255394
chr1 39596330 39596335 GATA2 JASPAR yes 118275115
chr1 39596354 39596358 YY1 TRANSFAC yes 28255395
chr1 39596354 39596358 YY1 TRANSFAC yes 118275116
chr1 39596360 39596371 TBX20 JASPAR yes 28255396
chr1 39596360 39596371 TBX20 JASPAR yes 118275117
chr1 39596377 39596398 IRF1 JASPAR yes 28255397
chr1 39596377 39596398 IRF1 JASPAR yes 118275118
chr1 39596379 39596394 IRF9 JASPAR yes 28255398
chr1 39596379 39596394 IRF9 JASPAR yes 118275119
chr1 39596380 39596394 IRF7 JASPAR yes 28255399
chr1 39596380 39596394 IRF8 JASPAR yes 28255400
chr1 39596380 39596394 IRF7 JASPAR yes 118275120
chr1 39596380 39596394 IRF8 JASPAR yes 118275121
chr1 39596381 39596395 STAT1 JASPAR yes 28255401
chr1 39596381 39596395 STAT1 JASPAR yes 118275122
chr1 39596381 39596396 PRDM1 JASPAR yes 28255402
chr1 39596381 39596396 STAT2 JASPAR yes 28255403
chr1 39596381 39596396 PRDM1 JASPAR yes 118275123
chr1 39596381 39596396 STAT2 JASPAR yes 118275124
chr1 39596381 39596399 IRF2 JASPAR yes 28255404
chr1 39596381 39596399 IRF2 JASPAR yes 118275125
chr1 39596382 39596394 IRF1 JASPAR yes 28255405
chr1 39596382 39596394 IRF1 JASPAR yes 118275126
chr1 39596385 39596396 FOXC1 JASPAR yes 28255406
chr1 39596385 39596396 FOXC1 JASPAR yes 118275127
chr1 39596393 39596397 YY1 TRANSFAC yes 28255407
chr1 39596393 39596397 YY1 TRANSFAC yes 118275128
chr1 39596405 39596410 ETS2 TRANSFAC yes 28255408
chr1 39596405 39596410 ETS2 TRANSFAC yes 118275129
chr1 39596421 39596426 ETS2 TRANSFAC yes 28255409
chr1 39596421 39596426 ETS2 TRANSFAC yes 118275130
chr1 39596455 39596470 RFX5 JASPAR yes 28255410
chr1 39596455 39596470 RFX5 JASPAR yes 118275131
SNP sites on vista1256[chr1:39596184-39596482]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39596229 rs77138375 A C no 247505
Genes possibly regulated by vista1256[chr1:39596184-39596482]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39546988 39952849 + MACF1 ENSG00000127603.19 39546988 0.86 0.99 544 50804
Expression level of Genes
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miRNAs possibly regulated by vista1256[chr1:39596184-39596482]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results