EnhancerDB
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  3. vista1258[chr1:39598673-39599090]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1258[chr1:39598673-39599090]
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Tissue distribution of vista1258
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Transcription factor that possibly regulate vista1258[chr1:39598673-39599090]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39598672 39598686 CREB3L1 JASPAR yes 28255859
chr1 39598672 39598686 CREB3L1 JASPAR yes 118275190
chr1 39598676 39598686 ETS1 JASPAR yes 28255860
chr1 39598676 39598686 ETV1 JASPAR yes 28255861
chr1 39598676 39598686 ETV3 JASPAR yes 28255862
chr1 39598676 39598686 ETV4 JASPAR yes 28255863
chr1 39598676 39598686 ETV5 JASPAR yes 28255864
chr1 39598676 39598686 ETS1 JASPAR yes 118275191
chr1 39598676 39598686 ETV1 JASPAR yes 118275192
chr1 39598676 39598686 ETV3 JASPAR yes 118275193
chr1 39598676 39598686 ETV4 JASPAR yes 118275194
chr1 39598676 39598686 ETV5 JASPAR yes 118275195
chr1 39598728 39598743 TFAP2A JASPAR yes 28255865
chr1 39598728 39598743 TFAP2A JASPAR yes 118275196
chr1 39598729 39598743 EBF1 JASPAR yes 28255866
chr1 39598729 39598743 EBF1 JASPAR yes 118275197
chr1 39598730 39598745 TFAP2A JASPAR yes 28255867
chr1 39598730 39598745 TFAP2C JASPAR yes 28255868
chr1 39598730 39598745 TFAP2A JASPAR yes 118275198
chr1 39598730 39598745 TFAP2C JASPAR yes 118275199
chr1 39598731 39598742 EBF1 JASPAR yes 28255869
chr1 39598731 39598742 EBF1 JASPAR yes 118275200
chr1 39598736 39598746 ETV6 JASPAR yes 28255870
chr1 39598736 39598746 ETV6 JASPAR yes 118275201
chr1 39598738 39598743 ETS2 TRANSFAC yes 28255871
chr1 39598738 39598743 ETS2 TRANSFAC yes 118275202
chr1 39598738 39598752 STAT1 JASPAR yes 28255872
chr1 39598738 39598752 STAT1 JASPAR yes 118275203
chr1 39598739 39598751 IRF1 JASPAR yes 28255873
chr1 39598739 39598751 IRF1 JASPAR yes 118275204
chr1 39598775 39598790 HNF4A JASPAR yes 28255874
chr1 39598775 39598790 HNF4A JASPAR yes 118275205
chr1 39598776 39598790 RXRB JASPAR yes 28255875
chr1 39598776 39598790 RXRG JASPAR yes 28255876
chr1 39598776 39598790 RXRB JASPAR yes 118275206
chr1 39598776 39598790 RXRG JASPAR yes 118275207
chr1 39598776 39598791 HNF4G JASPAR yes 28255877
chr1 39598776 39598791 LEF1 JASPAR yes 28255878
chr1 39598776 39598791 NR2C2 JASPAR yes 28255879
chr1 39598776 39598791 HNF4G JASPAR yes 118275208
chr1 39598776 39598791 LEF1 JASPAR yes 118275209
chr1 39598776 39598791 NR2C2 JASPAR yes 118275210
chr1 39598782 39598790 RHOXF1 JASPAR yes 28255880
chr1 39598782 39598790 RHOXF1 JASPAR yes 118275211
chr1 39598809 39598823 STAT1 JASPAR yes 28255881
chr1 39598809 39598823 STAT1 JASPAR yes 118275212
chr1 39598824 39598828 NFE TRANSFAC yes 28255882
chr1 39598824 39598828 NFE TRANSFAC yes 118275213
chr1 39598831 39598836 H4TF1 TRANSFAC yes 28255883
chr1 39598831 39598836 H4TF1 TRANSFAC yes 118275214
chr1 39598831 39598841 ERF JASPAR yes 28255884
chr1 39598831 39598841 ERG JASPAR yes 28255885
chr1 39598831 39598841 ETS1 JASPAR yes 28255886
chr1 39598831 39598841 FLI1 JASPAR yes 28255887
chr1 39598831 39598841 ERF JASPAR yes 118275215
chr1 39598831 39598841 ERG JASPAR yes 118275216
chr1 39598831 39598841 ETS1 JASPAR yes 118275217
chr1 39598831 39598841 FLI1 JASPAR yes 118275218
chr1 39598831 39598842 ETV2 JASPAR yes 28255888
chr1 39598831 39598842 ETV2 JASPAR yes 118275219
chr1 39598832 39598840 FEV JASPAR yes 28255889
chr1 39598832 39598840 FEV JASPAR yes 118275220
chr1 39598832 39598853 ZNF263 JASPAR yes 28255890
chr1 39598832 39598853 ZNF263 JASPAR yes 118275221
chr1 39598833 39598854 REST JASPAR yes 28255891
chr1 39598833 39598854 REST JASPAR yes 118275222
chr1 39598837 39598841 NFE TRANSFAC yes 28255892
chr1 39598837 39598841 NFE TRANSFAC yes 118275223
chr1 39598837 39598852 HNF4A JASPAR yes 28255893
chr1 39598837 39598852 HNF4A JASPAR yes 118275224
chr1 39598838 39598853 HNF4G JASPAR yes 28255894
chr1 39598838 39598853 HNF4G JASPAR yes 118275225
chr1 39598844 39598848 NFE TRANSFAC yes 28255895
chr1 39598844 39598848 NFE TRANSFAC yes 118275226
chr1 39598873 39598885 TFAP2A JASPAR yes 28255896
chr1 39598873 39598885 TFAP2A JASPAR yes 118275227
chr1 39598873 39598888 TFAP2C JASPAR yes 28255897
chr1 39598873 39598888 TFAP2C JASPAR yes 118275228
chr1 39598874 39598885 TFAP2A JASPAR yes 28255898
chr1 39598874 39598885 TFAP2B JASPAR yes 28255899
chr1 39598874 39598885 TFAP2C JASPAR yes 28255900
chr1 39598874 39598885 TFAP2A JASPAR yes 118275229
chr1 39598874 39598885 TFAP2B JASPAR yes 118275230
chr1 39598874 39598885 TFAP2C JASPAR yes 118275231
chr1 39598875 39598884 TFAP2A JASPAR yes 28255901
chr1 39598875 39598884 TFAP2A JASPAR yes 118275232
chr1 39598877 39598897 RREB1 JASPAR yes 28255902
chr1 39598877 39598897 RREB1 JASPAR yes 118275233
chr1 39598880 39598892 INSM1 JASPAR yes 28255903
chr1 39598880 39598892 INSM1 JASPAR yes 118275234
chr1 39598880 39598900 RREB1 JASPAR yes 28255904
chr1 39598880 39598900 RREB1 JASPAR yes 118275235
chr1 39598882 39598902 RREB1 JASPAR yes 28255905
chr1 39598882 39598902 RREB1 JASPAR yes 118275236
chr1 39598885 39598899 PLAG1 JASPAR yes 28255906
chr1 39598885 39598899 PLAG1 JASPAR yes 118275237
chr1 39598885 39598905 RREB1 JASPAR yes 28255907
chr1 39598885 39598905 RREB1 JASPAR yes 118275238
chr1 39598887 39598907 RREB1 JASPAR yes 28255908
chr1 39598887 39598907 RREB1 JASPAR yes 118275239
chr1 39598892 39598912 RREB1 JASPAR yes 28255909
chr1 39598892 39598912 RREB1 JASPAR yes 118275240
chr1 39598900 39598905 SP1 TRANSFAC yes 28255910
chr1 39598900 39598905 SP1 TRANSFAC yes 118275241
chr1 39598908 39598925 BCL6B JASPAR yes 28255911
chr1 39598908 39598925 BCL6B JASPAR yes 118275242
chr1 39598916 39598919 MYB TRANSFAC yes 28255912
chr1 39598916 39598919 MYB TRANSFAC yes 118275243
chr1 39598951 39598962 FOXP2 JASPAR yes 28255913
chr1 39598951 39598962 FOXP2 JASPAR yes 118275244
chr1 39598953 39598961 FOXO3 JASPAR yes 28255914
chr1 39598953 39598961 FOXO3 JASPAR yes 118275245
chr1 39598953 39598964 FOXA1 JASPAR yes 28255915
chr1 39598953 39598964 FOXA1 JASPAR yes 118275246
chr1 39598985 39599002 RXRA JASPAR yes 28255916
chr1 39598985 39599002 RXRA JASPAR yes 118275247
chr1 39599033 39599048 ZIC3 JASPAR yes 28255917
chr1 39599033 39599048 ZIC3 JASPAR yes 118275248
chr1 39599039 39599044 TFAP2A TRANSFAC yes 28255918
chr1 39599039 39599044 TFAP2A TRANSFAC yes 118275249
chr1 39599039 39599045 MZF1 JASPAR yes 28255919
chr1 39599039 39599045 MZF1 JASPAR yes 118275250
chr1 39599063 39599069 TCF4 TRANSFAC yes 28255920
chr1 39599063 39599069 TCF4 TRANSFAC yes 118275251
chr1 39599063 39599075 FOXI1 JASPAR yes 28255921
chr1 39599063 39599075 FOXI1 JASPAR yes 118275252
chr1 39599080 39599086 TCF4 TRANSFAC yes 28255922
chr1 39599080 39599086 TCF4 TRANSFAC yes 118275253
SNP sites on vista1258[chr1:39598673-39599090]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39598860 rs572002971 G A,C no 247522
chr1 39598927 rs12354320 C T no 247523
chr1 39598930 rs12354321 C T no 247524
chr1 39599029 rs189480714 A G no 247525
Genes possibly regulated by vista1258[chr1:39598673-39599090]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39546988 39952849 + MACF1 ENSG00000127603.19 39546988 0.86 0.99 544 48315
Expression level of Genes
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miRNAs possibly regulated by vista1258[chr1:39598673-39599090]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr4 113569033 113569054 - hsa-miR-367-3p MIMAT0000719 113569854 0.15270177610301033 0.0 0.0 1255
Expression level of miRNAs
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