EnhancerDB
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  3. vista1261[chr1:39629010-39629413]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1261[chr1:39629010-39629413]
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Tissue distribution of vista1261
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Transcription factor that possibly regulate vista1261[chr1:39629010-39629413]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39629009 39629024 FOXP1 JASPAR yes 28260888
chr1 39629009 39629024 FOXP1 JASPAR yes 118275318
chr1 39629010 39629025 FOXP1 JASPAR yes 28260889
chr1 39629010 39629025 FOXP1 JASPAR yes 118275319
chr1 39629011 39629026 FOXP1 JASPAR yes 28260890
chr1 39629011 39629026 FOXP1 JASPAR yes 118275320
chr1 39629011 39629032 IRF1 JASPAR yes 28260891
chr1 39629011 39629032 IRF1 JASPAR yes 118275321
chr1 39629012 39629027 FOXP1 JASPAR yes 28260892
chr1 39629012 39629027 FOXP1 JASPAR yes 118275322
chr1 39629012 39629033 IRF1 JASPAR yes 28260893
chr1 39629012 39629033 IRF1 JASPAR yes 118275323
chr1 39629013 39629028 FOXP1 JASPAR yes 28260894
chr1 39629013 39629028 FOXP1 JASPAR yes 118275324
chr1 39629013 39629034 IRF1 JASPAR yes 28260895
chr1 39629013 39629034 IRF1 JASPAR yes 118275325
chr1 39629014 39629029 FOXP1 JASPAR yes 28260896
chr1 39629014 39629029 FOXP1 JASPAR yes 118275326
chr1 39629014 39629035 IRF1 JASPAR yes 28260897
chr1 39629014 39629035 IRF1 JASPAR yes 118275327
chr1 39629015 39629030 FOXP1 JASPAR yes 28260898
chr1 39629015 39629030 FOXP1 JASPAR yes 118275328
chr1 39629015 39629036 IRF1 JASPAR yes 28260899
chr1 39629015 39629036 IRF1 JASPAR yes 118275329
chr1 39629016 39629031 FOXP1 JASPAR yes 28260900
chr1 39629016 39629031 FOXP1 JASPAR yes 118275330
chr1 39629016 39629037 IRF1 JASPAR yes 28260901
chr1 39629016 39629037 IRF1 JASPAR yes 118275331
chr1 39629017 39629032 FOXP1 JASPAR yes 28260902
chr1 39629017 39629032 FOXP1 JASPAR yes 118275332
chr1 39629017 39629038 IRF1 JASPAR yes 28260903
chr1 39629017 39629038 IRF1 JASPAR yes 118275333
chr1 39629018 39629033 FOXP1 JASPAR yes 28260904
chr1 39629018 39629033 FOXP1 JASPAR yes 118275334
chr1 39629020 39629035 FOXP1 JASPAR yes 28260905
chr1 39629020 39629035 FOXP1 JASPAR yes 118275335
chr1 39629021 39629042 IRF1 JASPAR yes 28260906
chr1 39629021 39629042 IRF1 JASPAR yes 118275336
chr1 39629022 39629037 FOXP1 JASPAR yes 28260907
chr1 39629022 39629037 FOXP1 JASPAR yes 118275337
chr1 39629022 39629043 IRF1 JASPAR yes 28260908
chr1 39629022 39629043 IRF1 JASPAR yes 118275338
chr1 39629026 39629047 IRF1 JASPAR yes 28260909
chr1 39629026 39629047 IRF1 JASPAR yes 118275339
chr1 39629027 39629042 FOXP1 JASPAR yes 28260910
chr1 39629027 39629042 FOXP1 JASPAR yes 118275340
chr1 39629027 39629048 IRF1 JASPAR yes 28260911
chr1 39629027 39629048 IRF1 JASPAR yes 118275341
chr1 39629031 39629046 STAT2 JASPAR yes 28260912
chr1 39629031 39629046 STAT2 JASPAR yes 118275342
chr1 39629032 39629047 FOXP1 JASPAR yes 28260913
chr1 39629032 39629047 FOXP1 JASPAR yes 118275343
chr1 39629032 39629053 IRF1 JASPAR yes 28260914
chr1 39629032 39629053 IRF1 JASPAR yes 118275344
chr1 39629033 39629054 IRF1 JASPAR yes 28260915
chr1 39629033 39629054 IRF1 JASPAR yes 118275345
chr1 39629037 39629052 FOXP1 JASPAR yes 28260916
chr1 39629037 39629052 FOXP1 JASPAR yes 118275346
chr1 39629038 39629053 FOXP1 JASPAR yes 28260917
chr1 39629038 39629053 FOXP1 JASPAR yes 118275347
chr1 39629039 39629060 IRF1 JASPAR yes 28260918
chr1 39629039 39629060 IRF1 JASPAR yes 118275348
chr1 39629041 39629056 IRF9 JASPAR yes 28260919
chr1 39629041 39629056 IRF9 JASPAR yes 118275349
chr1 39629043 39629057 STAT1 JASPAR yes 28260920
chr1 39629043 39629057 STAT1 JASPAR yes 118275350
chr1 39629043 39629058 STAT2 JASPAR yes 28260921
chr1 39629043 39629058 STAT2 JASPAR yes 118275351
chr1 39629063 39629067 YY1 TRANSFAC yes 28260922
chr1 39629063 39629067 YY1 TRANSFAC yes 118275352
chr1 39629088 39629092 ESR1 TRANSFAC yes 28260923
chr1 39629088 39629092 ESR1 TRANSFAC yes 118275353
chr1 39629120 39629131 DUX4 JASPAR yes 28260924
chr1 39629120 39629131 DUX4 JASPAR yes 118275354
chr1 39629124 39629128 H1TF2 TRANSFAC yes 28260925
chr1 39629124 39629128 NFE TRANSFAC yes 28260926
chr1 39629124 39629128 SRF TRANSFAC yes 28260927
chr1 39629124 39629128 H1TF2 TRANSFAC yes 118275355
chr1 39629124 39629128 NFE TRANSFAC yes 118275356
chr1 39629124 39629128 SRF TRANSFAC yes 118275357
chr1 39629132 39629147 PRDM1 JASPAR yes 28260928
chr1 39629132 39629147 PRDM1 JASPAR yes 118275358
chr1 39629135 39629148 POU2F2 JASPAR yes 28260929
chr1 39629135 39629148 POU2F2 JASPAR yes 118275359
chr1 39629153 39629158 MYB TRANSFAC yes 28260930
chr1 39629153 39629158 MYB TRANSFAC yes 118275360
chr1 39629155 39629163 FOXO3 JASPAR yes 28260931
chr1 39629155 39629163 FOXO3 JASPAR yes 118275361
chr1 39629194 39629207 ZBTB18 JASPAR yes 28260932
chr1 39629194 39629207 ZBTB18 JASPAR yes 118275362
chr1 39629216 39629220 YY1 TRANSFAC yes 28260933
chr1 39629216 39629220 YY1 TRANSFAC yes 118275363
chr1 39629226 39629241 SOX21 JASPAR yes 28260934
chr1 39629226 39629241 SOX21 JASPAR yes 118275364
chr1 39629243 39629252 NKX3-2 JASPAR yes 28260935
chr1 39629243 39629252 NKX3-2 JASPAR yes 118275365
chr1 39629246 39629256 NFATC3 JASPAR yes 28260936
chr1 39629246 39629256 NFATC3 JASPAR yes 118275366
chr1 39629248 39629255 NFATC2 JASPAR yes 28260937
chr1 39629248 39629255 NFATC2 JASPAR yes 118275367
chr1 39629277 39629281 H4TF2 TRANSFAC yes 28260938
chr1 39629277 39629281 H4TF2 TRANSFAC yes 118275368
chr1 39629290 39629296 MYC TRANSFAC yes 28260939
chr1 39629290 39629296 MYC TRANSFAC yes 118275369
chr1 39629299 39629310 DMRT3 JASPAR yes 28260940
chr1 39629299 39629310 DMRT3 JASPAR yes 118275370
chr1 39629306 39629310 YY1 TRANSFAC yes 28260941
chr1 39629306 39629310 YY1 TRANSFAC yes 118275371
chr1 39629307 39629327 TP53 JASPAR yes 28260942
chr1 39629307 39629327 TP53 JASPAR yes 118275372
chr1 39629308 39629323 TP53 JASPAR yes 28260943
chr1 39629308 39629323 TP53 JASPAR yes 118275373
chr1 39629323 39629333 POU6F2 JASPAR yes 28260944
chr1 39629323 39629333 POU6F2 JASPAR yes 118275374
chr1 39629327 39629331 YY1 TRANSFAC yes 28260945
chr1 39629327 39629331 YY1 TRANSFAC yes 118275375
chr1 39629353 39629359 ZNF354C JASPAR yes 28260946
chr1 39629353 39629359 ZNF354C JASPAR yes 118275376
chr1 39629354 39629363 NKX3-2 JASPAR yes 28260947
chr1 39629354 39629363 NKX3-2 JASPAR yes 118275377
chr1 39629368 39629379 STAT1 JASPAR yes 28260948
chr1 39629368 39629379 STAT3 JASPAR yes 28260949
chr1 39629368 39629379 STAT1 JASPAR yes 118275378
chr1 39629368 39629379 STAT3 JASPAR yes 118275379
chr1 39629380 39629384 NFE TRANSFAC yes 28260950
chr1 39629380 39629384 NFE TRANSFAC yes 118275380
chr1 39629390 39629401 RUNX1 JASPAR yes 28260951
chr1 39629390 39629401 RUNX1 JASPAR yes 118275381
SNP sites on vista1261[chr1:39629010-39629413]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39629032 rs113146568 A T
FOXP1 IRF1 STAT2
247835
chr1 39629062 rs66531516 G A no 247836
chr1 39629083 rs572374365 A C no 247837
chr1 39629175 rs114518945 G A no 247838
Genes possibly regulated by vista1261[chr1:39629010-39629413]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39546988 39952849 + MACF1 ENSG00000127603.19 39546988 0.86 0.99 544 17978
Expression level of Genes
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miRNAs possibly regulated by vista1261[chr1:39629010-39629413]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr4 113569033 113569054 - hsa-miR-367-3p MIMAT0000719 113569854 0.19638064840863245 0.0 0.0 1255
Expression level of miRNAs
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