EnhancerDB
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  3. vista127[chr1:3607916-3608261]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista127[chr1:3607916-3608261]
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Tissue distribution of vista127
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Transcription factor that possibly regulate vista127[chr1:3607916-3608261]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3607919 3607925 TCF4 TRANSFAC yes 118219305
chr1 3607934 3607944 TBX21 JASPAR yes 118219306
chr1 3607934 3607945 TBX20 JASPAR yes 118219307
chr1 3607934 3607945 TBX2 JASPAR yes 118219308
chr1 3607934 3607947 EOMES JASPAR yes 118219309
chr1 3607935 3607943 MGA JASPAR yes 118219310
chr1 3607935 3607943 TBX15 JASPAR yes 118219311
chr1 3607935 3607943 TBX1 JASPAR yes 118219312
chr1 3607935 3607943 TBX4 JASPAR yes 118219313
chr1 3607935 3607943 TBX5 JASPAR yes 118219314
chr1 3607935 3607945 TBR1 JASPAR yes 118219315
chr1 3607945 3607951 NFE2 TRANSFAC yes 118219316
chr1 3607949 3607955 SP1 TRANSFAC yes 118219317
chr1 3607949 3607959 SP1 JASPAR yes 118219318
chr1 3607951 3607956 SP1 TRANSFAC yes 118219319
chr1 3607974 3607978 YY1 TRANSFAC yes 118219320
chr1 3607977 3607984 MEIS1 JASPAR yes 118219321
chr1 3607977 3607985 MEIS2 JASPAR yes 118219322
chr1 3607977 3607985 MEIS3 JASPAR yes 118219323
chr1 3608008 3608021 TFAP2A JASPAR yes 118219324
chr1 3608008 3608021 TFAP2B JASPAR yes 118219325
chr1 3608008 3608021 TFAP2C JASPAR yes 118219326
chr1 3608021 3608040 REST JASPAR yes 118219327
chr1 3608036 3608051 TFAP2A JASPAR yes 118219328
chr1 3608036 3608051 TFAP2C JASPAR yes 118219329
chr1 3608036 3608057 REST JASPAR yes 118219330
chr1 3608037 3608056 REST JASPAR yes 118219331
chr1 3608050 3608065 SCRT1 JASPAR yes 118219332
chr1 3608052 3608065 SCRT2 JASPAR yes 118219333
chr1 3608090 3608097 SP1 TRANSFAC yes 118219334
chr1 3608091 3608096 SP1 TRANSFAC yes 118219335
chr1 3608091 3608097 SP1 TRANSFAC yes 118219336
chr1 3608091 3608098 SP1 TRANSFAC yes 118219337
chr1 3608092 3608106 GLIS2 JASPAR yes 118219338
chr1 3608092 3608106 ZIC1 JASPAR yes 118219339
chr1 3608092 3608107 ZIC3 JASPAR yes 118219340
chr1 3608092 3608107 ZIC4 JASPAR yes 118219341
chr1 3608118 3608128 SP1 JASPAR yes 118219342
chr1 3608118 3608139 ZNF263 JASPAR yes 118219343
chr1 3608125 3608131 MAZ TRANSFAC yes 118219344
chr1 3608125 3608136 E2F6 JASPAR yes 118219345
chr1 3608129 3608134 ETS2 TRANSFAC yes 118219346
chr1 3608140 3608155 RUNX2 JASPAR yes 118219347
chr1 3608144 3608154 RUNX3 JASPAR yes 118219348
chr1 3608145 3608154 RUNX2 JASPAR yes 118219349
chr1 3608168 3608183 TFAP2A JASPAR yes 118219350
chr1 3608168 3608183 TFAP2C JASPAR yes 118219351
chr1 3608169 3608178 TFAP2A JASPAR yes 118219352
chr1 3608169 3608180 EBF1 JASPAR yes 118219353
chr1 3608173 3608178 TFAP2A TRANSFAC yes 118219354
chr1 3608173 3608179 MZF1 JASPAR yes 118219355
chr1 3608203 3608218 TFAP2A JASPAR yes 118219356
chr1 3608204 3608208 H4TF2 TRANSFAC yes 118219357
chr1 3608204 3608218 EBF1 JASPAR yes 118219358
chr1 3608205 3608220 TFAP2C JASPAR yes 118219359
chr1 3608206 3608217 EBF1 JASPAR yes 118219360
chr1 3608212 3608217 SP1 TRANSFAC yes 118219361
chr1 3608224 3608236 TAL1 JASPAR yes 118219362
chr1 3608225 3608237 NHLH1 JASPAR yes 118219363
chr1 3608226 3608236 MSC JASPAR yes 118219364
chr1 3608226 3608236 NHLH1 JASPAR yes 118219365
chr1 3608226 3608236 TFAP4 JASPAR yes 118219366
chr1 3608233 3608243 ALX3 JASPAR yes 118219367
chr1 3608233 3608243 EN2 JASPAR yes 118219368
chr1 3608233 3608243 ESX1 JASPAR yes 118219369
chr1 3608233 3608243 GBX1 JASPAR yes 118219370
chr1 3608233 3608243 LBX2 JASPAR yes 118219371
chr1 3608233 3608243 LHX2 JASPAR yes 118219372
chr1 3608233 3608243 MIXL1 JASPAR yes 118219373
chr1 3608234 3608242 LHX9 JASPAR yes 118219374
chr1 3608234 3608242 SHOX JASPAR yes 118219375
SNP sites on vista127[chr1:3607916-3608261]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3607960 rs368036522 A G no 24651
chr1 3608011 rs10732965 C T
TFAP2A TFAP2B TFAP2C
24652
chr1 3608215 rs548914945 G A
EBF1 SP1 TFAP2A TFAP2C
24653
chr1 3608227 rs34868661 A G
MSC NHLH1 TAL1 TFAP4
24654
Genes possibly regulated by vista127[chr1:3607916-3608261]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3406484 3528059 - MEGF6 ENSG00000162591.11 3528059 0.83 1.0 76 20143
chr1 3541566 3546691 + TPRG1L ENSG00000158109.10 3541566 0.55 1.0 77 33650
chr1 3547331 3569325 - WRAP73 ENSG00000116213.11 3569325 0.66 1.0 78 61409
chr1 3569084 3652765 + TP73 ENSG00000078900.10 3569084 0.97 1.0 79 61168
chr1 3668962 3688209 + CCDC27 ENSG00000162592.4 3668962 0.94 1.0 80 39299
chr1 3689352 3692546 + SMIM1 ENSG00000235169.3 3689352 0.87 0.99 81 18909
Expression level of Genes
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miRNAs possibly regulated by vista127[chr1:3607916-3608261]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results