EnhancerDB
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  3. vista1270[chr1:39874208-39874673]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1270[chr1:39874208-39874673]
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Tissue distribution of vista1270
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Transcription factor that possibly regulate vista1270[chr1:39874208-39874673]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 39874241 39874249 SP1 TRANSFAC yes 118275781
chr1 39874241 39874252 NRF1 JASPAR yes 118275782
chr1 39874267 39874279 TFAP2B JASPAR yes 118275783
chr1 39874267 39874279 TFAP2C JASPAR yes 118275784
chr1 39874274 39874293 REST JASPAR yes 118275785
chr1 39874299 39874312 SMAD2 JASPAR yes 118275786
chr1 39874311 39874322 E2F1 JASPAR yes 118275787
chr1 39874312 39874317 SP1 TRANSFAC yes 118275788
chr1 39874312 39874323 E2F4 JASPAR yes 118275789
chr1 39874312 39874323 E2F6 JASPAR yes 118275790
chr1 39874313 39874318 SP1 TRANSFAC yes 118275791
chr1 39874316 39874322 MAZ TRANSFAC yes 118275792
chr1 39874320 39874325 SP1 TRANSFAC yes 118275793
chr1 39874320 39874327 SP1 TRANSFAC yes 118275794
chr1 39874320 39874329 SP1 TRANSFAC yes 118275795
chr1 39874320 39874341 ZNF263 JASPAR yes 118275796
chr1 39874330 39874341 E2F4 JASPAR yes 118275797
chr1 39874336 39874343 CEBPA TRANSFAC yes 118275798
chr1 39874339 39874348 HiNF-C TRANSFAC yes 118275799
chr1 39874339 39874349 SP1 JASPAR yes 118275800
chr1 39874340 39874346 SP1 TRANSFAC yes 118275801
chr1 39874341 39874346 SP1 TRANSFAC yes 118275802
chr1 39874342 39874347 SP1 TRANSFAC yes 118275803
chr1 39874342 39874348 SP1 TRANSFAC yes 118275804
chr1 39874345 39874355 NFKB1 JASPAR yes 118275805
chr1 39874345 39874355 RELA JASPAR yes 118275806
chr1 39874345 39874355 REL JASPAR yes 118275807
chr1 39874345 39874356 NFKB1 JASPAR yes 118275808
chr1 39874351 39874356 ETS2 TRANSFAC yes 118275809
chr1 39874354 39874360 SOX10 JASPAR yes 118275810
chr1 39874400 39874421 ZNF263 JASPAR yes 118275811
chr1 39874402 39874409 SPIB JASPAR yes 118275812
chr1 39874424 39874431 SP1 TRANSFAC yes 118275813
chr1 39874424 39874434 SP1 JASPAR yes 118275814
chr1 39874425 39874433 SP1 TRANSFAC yes 118275815
chr1 39874425 39874434 SP1 TRANSFAC yes 118275816
chr1 39874426 39874431 SP1 TRANSFAC yes 118275817
chr1 39874427 39874432 SP1 TRANSFAC yes 118275818
chr1 39874427 39874433 SP1 TRANSFAC yes 118275819
chr1 39874430 39874440 NFKB1 JASPAR yes 118275820
chr1 39874430 39874440 REL JASPAR yes 118275821
chr1 39874430 39874441 NFKB1 JASPAR yes 118275822
chr1 39874430 39874443 NFKB1 JASPAR yes 118275823
chr1 39874430 39874443 NFKB2 JASPAR yes 118275824
chr1 39874431 39874442 NFKB1 JASPAR yes 118275825
chr1 39874437 39874451 PLAG1 JASPAR yes 118275826
chr1 39874438 39874452 PLAG1 JASPAR yes 118275827
chr1 39874442 39874457 TFAP2C JASPAR yes 118275828
chr1 39874444 39874459 TFAP2A JASPAR yes 118275829
chr1 39874445 39874457 TFAP2A JASPAR yes 118275830
chr1 39874445 39874457 TFAP2B JASPAR yes 118275831
chr1 39874445 39874457 TFAP2C JASPAR yes 118275832
chr1 39874445 39874460 TFAP2A JASPAR yes 118275833
chr1 39874446 39874455 TFAP2A JASPAR yes 118275834
chr1 39874447 39874456 TFAP2A JASPAR yes 118275835
chr1 39874451 39874461 SP1 JASPAR yes 118275836
chr1 39874455 39874467 ZBTB7B JASPAR yes 118275837
chr1 39874455 39874467 ZBTB7C JASPAR yes 118275838
chr1 39874456 39874468 ZBTB7A JASPAR yes 118275839
chr1 39874458 39874463 SP1 TRANSFAC yes 118275840
chr1 39874525 39874531 SP1 TRANSFAC yes 118275841
chr1 39874525 39874535 SP1 JASPAR yes 118275842
chr1 39874529 39874550 ZNF263 JASPAR yes 118275843
chr1 39874548 39874552 H1TF2 TRANSFAC yes 118275844
chr1 39874548 39874552 NFE TRANSFAC yes 118275845
chr1 39874548 39874552 SRF TRANSFAC yes 118275846
chr1 39874554 39874575 ZNF263 JASPAR yes 118275847
chr1 39874562 39874573 E2F6 JASPAR yes 118275848
chr1 39874587 39874608 ZNF263 JASPAR yes 118275849
chr1 39874592 39874602 SP1 JASPAR yes 118275850
chr1 39874597 39874606 SP1 TRANSFAC yes 118275851
chr1 39874598 39874604 SP1 TRANSFAC yes 118275852
chr1 39874598 39874608 SP1 JASPAR yes 118275853
chr1 39874599 39874606 SP1 TRANSFAC yes 118275854
chr1 39874600 39874605 SP1 TRANSFAC yes 118275855
chr1 39874600 39874606 SP1 TRANSFAC yes 118275856
chr1 39874600 39874607 SP1 TRANSFAC yes 118275857
chr1 39874601 39874609 WT1 TRANSFAC yes 118275858
chr1 39874603 39874616 TFAP2A JASPAR yes 118275859
chr1 39874604 39874610 SP1 TRANSFAC yes 118275860
chr1 39874613 39874622 SP1 TRANSFAC yes 118275861
chr1 39874614 39874620 SP1 TRANSFAC yes 118275862
chr1 39874614 39874624 SP1 JASPAR yes 118275863
chr1 39874615 39874622 SP1 TRANSFAC yes 118275864
chr1 39874616 39874621 SP1 TRANSFAC yes 118275865
chr1 39874616 39874622 SP1 TRANSFAC yes 118275866
chr1 39874616 39874623 SP1 TRANSFAC yes 118275867
chr1 39874616 39874637 ZNF263 JASPAR yes 118275868
chr1 39874617 39874625 WT1 TRANSFAC yes 118275869
chr1 39874619 39874640 ZNF263 JASPAR yes 118275870
chr1 39874620 39874626 SP1 TRANSFAC yes 118275871
chr1 39874620 39874630 SP1 JASPAR yes 118275872
chr1 39874622 39874627 SP1 TRANSFAC yes 118275873
chr1 39874628 39874649 ZNF263 JASPAR yes 118275874
chr1 39874633 39874644 FLI1 JASPAR yes 118275875
chr1 39874635 39874643 EHF JASPAR yes 118275876
SNP sites on vista1270[chr1:39874208-39874673]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 39874249 rs373782924 C T
NRF1 SP1
248766
chr1 39874327 rs539114590 G A
SP1 ZNF263
248767
chr1 39874539 rs113214136 G T
ZNF263
248768
chr1 39874594 rs188374133 C T
SP1 ZNF263
248769
chr1 39874670 rs557426481 C T no 248770
Genes possibly regulated by vista1270[chr1:39874208-39874673]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39876151 39882154 + KIAA0754 ENSG00000255103.1 39876151 0.84 1.0 545 98522
chr1 39957318 39991607 + BMP8A ENSG00000183682.7 39957318 0.97 1.0 546 17355
Expression level of Genes
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miRNAs possibly regulated by vista1270[chr1:39874208-39874673]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results