EnhancerDB
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  3. vista1271[chr1:40005546-40005959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1271[chr1:40005546-40005959]
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Tissue distribution of vista1271
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Transcription factor that possibly regulate vista1271[chr1:40005546-40005959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40005548 40005563 FOXP1 JASPAR yes 28278676
chr1 40005548 40005563 FOXP1 JASPAR yes 118275877
chr1 40005549 40005558 SRY JASPAR yes 28278677
chr1 40005549 40005558 SRY JASPAR yes 118275878
chr1 40005549 40005560 FOXP2 JASPAR yes 28278678
chr1 40005549 40005560 FOXP2 JASPAR yes 118275879
chr1 40005549 40005561 FOXC2 JASPAR yes 28278679
chr1 40005549 40005561 FOXC2 JASPAR yes 118275880
chr1 40005551 40005559 FOXO3 JASPAR yes 28278680
chr1 40005551 40005559 FOXO3 JASPAR yes 118275881
chr1 40005552 40005570 IRF2 JASPAR yes 28278681
chr1 40005552 40005570 IRF2 JASPAR yes 118275882
chr1 40005555 40005560 ETS2 TRANSFAC yes 28278682
chr1 40005555 40005560 ETS2 TRANSFAC yes 118275883
chr1 40005558 40005579 IRF1 JASPAR yes 28278683
chr1 40005558 40005579 IRF1 JASPAR yes 118275884
chr1 40005560 40005575 PRDM1 JASPAR yes 28278684
chr1 40005560 40005575 PRDM1 JASPAR yes 118275885
chr1 40005599 40005609 REL JASPAR yes 28278685
chr1 40005599 40005609 REL JASPAR yes 118275886
chr1 40005629 40005633 NFE TRANSFAC yes 28278686
chr1 40005629 40005633 NFE TRANSFAC yes 118275887
chr1 40005644 40005658 PLAG1 JASPAR yes 28278687
chr1 40005644 40005658 PLAG1 JASPAR yes 118275888
chr1 40005651 40005662 CEBPA JASPAR yes 28278688
chr1 40005651 40005662 CEBPA JASPAR yes 118275889
chr1 40005652 40005663 CEBPB JASPAR yes 28278689
chr1 40005652 40005663 CEBPB JASPAR yes 118275890
chr1 40005663 40005677 TLX1 JASPAR yes 28278690
chr1 40005663 40005677 TLX1 JASPAR yes 118275891
chr1 40005664 40005681 ESR1 JASPAR yes 28278691
chr1 40005664 40005681 ESR1 JASPAR yes 118275892
chr1 40005685 40005691 MZF1 JASPAR yes 28278692
chr1 40005685 40005691 MZF1 JASPAR yes 118275893
chr1 40005697 40005703 YY1 JASPAR yes 28278693
chr1 40005697 40005703 YY1 JASPAR yes 118275894
chr1 40005699 40005720 ZNF263 JASPAR yes 28278694
chr1 40005699 40005720 ZNF263 JASPAR yes 118275895
chr1 40005714 40005725 EBF1 JASPAR yes 28278695
chr1 40005714 40005725 EBF1 JASPAR yes 118275896
chr1 40005769 40005773 YY1 TRANSFAC yes 28278696
chr1 40005769 40005773 YY1 TRANSFAC yes 118275897
chr1 40005783 40005797 TLX1 JASPAR yes 28278697
chr1 40005783 40005797 TLX1 JASPAR yes 118275898
chr1 40005790 40005802 YY1 JASPAR yes 28278698
chr1 40005790 40005802 YY1 JASPAR yes 118275899
chr1 40005836 40005847 E2F6 JASPAR yes 28278699
chr1 40005836 40005847 E2F6 JASPAR yes 118275900
chr1 40005839 40005847 TBX15 JASPAR yes 28278700
chr1 40005839 40005847 TBX15 JASPAR yes 118275901
chr1 40005840 40005854 PLAG1 JASPAR yes 28278701
chr1 40005840 40005854 PLAG1 JASPAR yes 118275902
chr1 40005864 40005872 RHOXF1 JASPAR yes 28278702
chr1 40005864 40005872 RHOXF1 JASPAR yes 118275903
chr1 40005894 40005898 H1TF2 TRANSFAC yes 28278703
chr1 40005894 40005898 NFE TRANSFAC yes 28278704
chr1 40005894 40005898 SRF TRANSFAC yes 28278705
chr1 40005894 40005898 H1TF2 TRANSFAC yes 118275904
chr1 40005894 40005898 NFE TRANSFAC yes 118275905
chr1 40005894 40005898 SRF TRANSFAC yes 118275906
chr1 40005906 40005916 HOXB13 JASPAR yes 28278706
chr1 40005906 40005916 HOXD13 JASPAR yes 28278707
chr1 40005906 40005916 HOXB13 JASPAR yes 118275907
chr1 40005906 40005916 HOXD13 JASPAR yes 118275908
chr1 40005907 40005917 ALX3 JASPAR yes 28278708
chr1 40005907 40005917 EMX2 JASPAR yes 28278709
chr1 40005907 40005917 ESX1 JASPAR yes 28278710
chr1 40005907 40005917 GSX1 JASPAR yes 28278711
chr1 40005907 40005917 GSX2 JASPAR yes 28278712
chr1 40005907 40005917 HOXA2 JASPAR yes 28278713
chr1 40005907 40005917 HOXB2 JASPAR yes 28278714
chr1 40005907 40005917 HOXB3 JASPAR yes 28278715
chr1 40005907 40005917 LBX2 JASPAR yes 28278716
chr1 40005907 40005917 LHX2 JASPAR yes 28278717
chr1 40005907 40005917 LHX6 JASPAR yes 28278718
chr1 40005907 40005917 MEOX1 JASPAR yes 28278719
chr1 40005907 40005917 MEOX2 JASPAR yes 28278720
chr1 40005907 40005917 MIXL1 JASPAR yes 28278721
chr1 40005907 40005917 NOTO JASPAR yes 28278722
chr1 40005907 40005917 ALX3 JASPAR yes 118275909
chr1 40005907 40005917 EMX2 JASPAR yes 118275910
chr1 40005907 40005917 ESX1 JASPAR yes 118275911
chr1 40005907 40005917 GSX1 JASPAR yes 118275912
chr1 40005907 40005917 GSX2 JASPAR yes 118275913
chr1 40005907 40005917 HOXA2 JASPAR yes 118275914
chr1 40005907 40005917 HOXB2 JASPAR yes 118275915
chr1 40005907 40005917 HOXB3 JASPAR yes 118275916
chr1 40005907 40005917 LBX2 JASPAR yes 118275917
chr1 40005907 40005917 LHX2 JASPAR yes 118275918
chr1 40005907 40005917 LHX6 JASPAR yes 118275919
chr1 40005907 40005917 MEOX1 JASPAR yes 118275920
chr1 40005907 40005917 MEOX2 JASPAR yes 118275921
chr1 40005907 40005917 MIXL1 JASPAR yes 118275922
chr1 40005907 40005917 NOTO JASPAR yes 118275923
chr1 40005908 40005916 BSX JASPAR yes 28278723
chr1 40005908 40005916 DLX6 JASPAR yes 28278724
chr1 40005908 40005916 EN1 JASPAR yes 28278725
chr1 40005908 40005916 ISX JASPAR yes 28278726
chr1 40005908 40005916 LBX1 JASPAR yes 28278727
chr1 40005908 40005916 LHX9 JASPAR yes 28278728
chr1 40005908 40005916 LMX1A JASPAR yes 28278729
chr1 40005908 40005916 LMX1B JASPAR yes 28278730
chr1 40005908 40005916 NKX6-1 JASPAR yes 28278731
chr1 40005908 40005916 NKX6-2 JASPAR yes 28278732
chr1 40005908 40005916 PAX4 JASPAR yes 28278733
chr1 40005908 40005916 PDX1 JASPAR yes 28278734
chr1 40005908 40005916 PRRX1 JASPAR yes 28278735
chr1 40005908 40005916 RAX2 JASPAR yes 28278736
chr1 40005908 40005916 SHOX JASPAR yes 28278737
chr1 40005908 40005916 UNCX JASPAR yes 28278738
chr1 40005908 40005916 VAX1 JASPAR yes 28278739
chr1 40005908 40005916 VAX2 JASPAR yes 28278740
chr1 40005908 40005916 VSX1 JASPAR yes 28278741
chr1 40005908 40005916 VSX2 JASPAR yes 28278742
chr1 40005908 40005916 BSX JASPAR yes 118275924
chr1 40005908 40005916 DLX6 JASPAR yes 118275925
chr1 40005908 40005916 EN1 JASPAR yes 118275926
chr1 40005908 40005916 ISX JASPAR yes 118275927
chr1 40005908 40005916 LBX1 JASPAR yes 118275928
chr1 40005908 40005916 LHX9 JASPAR yes 118275929
chr1 40005908 40005916 LMX1A JASPAR yes 118275930
chr1 40005908 40005916 LMX1B JASPAR yes 118275931
chr1 40005908 40005916 NKX6-1 JASPAR yes 118275932
chr1 40005908 40005916 NKX6-2 JASPAR yes 118275933
chr1 40005908 40005916 PAX4 JASPAR yes 118275934
chr1 40005908 40005916 PDX1 JASPAR yes 118275935
chr1 40005908 40005916 PRRX1 JASPAR yes 118275936
chr1 40005908 40005916 RAX2 JASPAR yes 118275937
chr1 40005908 40005916 SHOX JASPAR yes 118275938
chr1 40005908 40005916 UNCX JASPAR yes 118275939
chr1 40005908 40005916 VAX1 JASPAR yes 118275940
chr1 40005908 40005916 VAX2 JASPAR yes 118275941
chr1 40005908 40005916 VSX1 JASPAR yes 118275942
chr1 40005908 40005916 VSX2 JASPAR yes 118275943
chr1 40005908 40005918 POU6F2 JASPAR yes 28278743
chr1 40005908 40005918 POU6F2 JASPAR yes 118275944
chr1 40005948 40005963 MAFK JASPAR yes 28278744
chr1 40005948 40005963 MAFK JASPAR yes 118275945
SNP sites on vista1271[chr1:40005546-40005959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40005763 rs542348901 GTTTTTGTAT G no 249164
chr1 40005785 rs547579042 T C
TLX1
249165
chr1 40005903 rs72663521 G A no 249166
Genes possibly regulated by vista1271[chr1:40005546-40005959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 39957318 39991607 + BMP8A ENSG00000183682.7 39957318 0.97 1.0 546 51772
chr1 40026488 40042462 - PABPC4 ENSG00000090621.9 40042462 0.74 1.0 547 63497
chr1 40089825 40105617 - HEYL ENSG00000163909.6 40105617 0.78 1.0 548 342
Expression level of Genes
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miRNAs possibly regulated by vista1271[chr1:40005546-40005959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results