EnhancerDB
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  3. vista1276[chr1:40283075-40283206]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1276[chr1:40283075-40283206]
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Tissue distribution of vista1276
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Transcription factor that possibly regulate vista1276[chr1:40283075-40283206]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40282394 40283512 CTCF UCSC Txn Factor no Conserved 107802907
chr1 40283101 40283112 TBX20 JASPAR yes 28292685
chr1 40283101 40283112 TBX20 JASPAR yes 118276202
chr1 40283109 40283126 BCL6B JASPAR yes 28292686
chr1 40283109 40283126 BCL6B JASPAR yes 118276203
chr1 40283117 40283123 TCF4 TRANSFAC yes 28292687
chr1 40283117 40283123 TCF4 TRANSFAC yes 118276204
chr1 40283121 40283131 MAX JASPAR yes 28292688
chr1 40283121 40283131 MAX JASPAR yes 118276205
chr1 40283121 40283133 HES7 JASPAR yes 28292689
chr1 40283121 40283133 HES7 JASPAR yes 118276206
chr1 40283122 40283132 BHLHE40 JASPAR yes 28292690
chr1 40283122 40283132 BHLHE41 JASPAR yes 28292691
chr1 40283122 40283132 HEY1 JASPAR yes 28292692
chr1 40283122 40283132 HEY2 JASPAR yes 28292693
chr1 40283122 40283132 MAX JASPAR yes 28292694
chr1 40283122 40283132 MLXIPL JASPAR yes 28292695
chr1 40283122 40283132 MLX JASPAR yes 28292696
chr1 40283122 40283132 MNT JASPAR yes 28292697
chr1 40283122 40283132 SREBF2 JASPAR yes 28292698
chr1 40283122 40283132 TFE3 JASPAR yes 28292699
chr1 40283122 40283132 TFEB JASPAR yes 28292700
chr1 40283122 40283132 TFEC JASPAR yes 28292701
chr1 40283122 40283132 BHLHE40 JASPAR yes 118276207
chr1 40283122 40283132 BHLHE41 JASPAR yes 118276208
chr1 40283122 40283132 HEY1 JASPAR yes 118276209
chr1 40283122 40283132 HEY2 JASPAR yes 118276210
chr1 40283122 40283132 MAX JASPAR yes 118276211
chr1 40283122 40283132 MLXIPL JASPAR yes 118276212
chr1 40283122 40283132 MLX JASPAR yes 118276213
chr1 40283122 40283132 MNT JASPAR yes 118276214
chr1 40283122 40283132 SREBF2 JASPAR yes 118276215
chr1 40283122 40283132 TFE3 JASPAR yes 118276216
chr1 40283122 40283132 TFEB JASPAR yes 118276217
chr1 40283122 40283132 TFEC JASPAR yes 118276218
chr1 40283122 40283133 USF1 JASPAR yes 28292702
chr1 40283122 40283133 USF2 JASPAR yes 28292703
chr1 40283122 40283133 USF1 JASPAR yes 118276219
chr1 40283122 40283133 USF2 JASPAR yes 118276220
chr1 40283123 40283133 MAX JASPAR yes 28292704
chr1 40283123 40283133 MAX JASPAR yes 118276221
chr1 40283124 40283129 MYC TRANSFAC yes 28292705
chr1 40283124 40283129 USF1 TRANSFAC yes 28292706
chr1 40283124 40283129 USF2 TRANSFAC yes 28292707
chr1 40283124 40283129 MYC TRANSFAC yes 118276222
chr1 40283124 40283129 USF1 TRANSFAC yes 118276223
chr1 40283124 40283129 USF2 TRANSFAC yes 118276224
chr1 40283137 40283152 STAT1 JASPAR yes 28292708
chr1 40283137 40283152 STAT1 JASPAR yes 118276225
chr1 40283139 40283152 ELF1 JASPAR yes 28292709
chr1 40283139 40283152 ELF1 JASPAR yes 118276226
chr1 40283140 40283152 ELF4 JASPAR yes 28292710
chr1 40283140 40283152 ELF4 JASPAR yes 118276227
chr1 40283140 40283153 ELF3 JASPAR yes 28292711
chr1 40283140 40283153 ELF3 JASPAR yes 118276228
chr1 40283141 40283152 ELF5 JASPAR yes 28292712
chr1 40283141 40283152 ELF5 JASPAR yes 118276229
chr1 40283142 40283152 ETV6 JASPAR yes 28292713
chr1 40283142 40283152 ETV6 JASPAR yes 118276230
chr1 40283142 40283153 ELK4 JASPAR yes 28292714
chr1 40283142 40283153 FLI1 JASPAR yes 28292715
chr1 40283142 40283153 ELK4 JASPAR yes 118276231
chr1 40283142 40283153 FLI1 JASPAR yes 118276232
chr1 40283143 40283151 EHF JASPAR yes 28292716
chr1 40283143 40283151 FEV JASPAR yes 28292717
chr1 40283143 40283151 EHF JASPAR yes 118276233
chr1 40283143 40283151 FEV JASPAR yes 118276234
chr1 40283144 40283151 SPI1 JASPAR yes 28292718
chr1 40283144 40283151 SPI1 JASPAR yes 118276235
chr1 40283144 40283158 STAT1 JASPAR yes 28292719
chr1 40283144 40283158 STAT1 JASPAR yes 118276236
chr1 40283147 40283167 ESR1 JASPAR yes 28292720
chr1 40283147 40283167 ESR1 JASPAR yes 118276237
chr1 40283155 40283159 NFE TRANSFAC yes 28292721
chr1 40283155 40283159 NFE TRANSFAC yes 118276238
chr1 40283173 40283183 HOXA13 JASPAR yes 28292722
chr1 40283173 40283183 HOXB13 JASPAR yes 28292723
chr1 40283173 40283183 HOXD13 JASPAR yes 28292724
chr1 40283173 40283183 HOXA13 JASPAR yes 118276239
chr1 40283173 40283183 HOXB13 JASPAR yes 118276240
chr1 40283173 40283183 HOXD13 JASPAR yes 118276241
chr1 40283173 40283184 HOXA10 JASPAR yes 28292725
chr1 40283173 40283184 HOXA10 JASPAR yes 118276242
chr1 40283174 40283183 CDX1 JASPAR yes 28292726
chr1 40283174 40283183 CDX1 JASPAR yes 118276243
chr1 40283174 40283184 MNX1 JASPAR yes 28292727
chr1 40283174 40283184 MNX1 JASPAR yes 118276244
chr1 40283174 40283185 CDX2 JASPAR yes 28292728
chr1 40283174 40283185 CDX2 JASPAR yes 118276245
chr1 40283183 40283186 MYB TRANSFAC yes 28292729
chr1 40283183 40283186 MYB TRANSFAC yes 118276246
SNP sites on vista1276[chr1:40283075-40283206]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40283145 rs1760225 A C
CTCF EHF ELF1 ELF3 ELF4 ELF5 ELK4 ETV6 FEV FLI1 SPI1 STAT1
250845
Genes possibly regulated by vista1276[chr1:40283075-40283206]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40222854 40254533 - BMP8B ENSG00000116985.6 40254533 0.81 1.0 552 71458
chr1 40235195 40237020 - OXCT2 ENSG00000198754.5 40237020 0.82 1.0 553 53945
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 34023
chr1 40361098 40367928 - MYCL ENSG00000116990.9 40367928 0.82 1.0 555 15278
Expression level of Genes
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miRNAs possibly regulated by vista1276[chr1:40283075-40283206]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results