EnhancerDB
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  3. vista1278[chr1:40331340-40331501]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1278[chr1:40331340-40331501]
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Tissue distribution of vista1278
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Transcription factor that possibly regulate vista1278[chr1:40331340-40331501]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40331339 40331354 FOXP1 JASPAR yes 28297038
chr1 40331339 40331354 FOXP1 JASPAR yes 118276301
chr1 40331340 40331355 FOXP1 JASPAR yes 28297039
chr1 40331340 40331355 FOXP1 JASPAR yes 118276302
chr1 40331341 40331356 FOXP1 JASPAR yes 28297040
chr1 40331341 40331356 FOXP1 JASPAR yes 118276303
chr1 40331341 40331362 IRF1 JASPAR yes 28297041
chr1 40331341 40331362 IRF1 JASPAR yes 118276304
chr1 40331342 40331357 FOXP1 JASPAR yes 28297042
chr1 40331342 40331357 FOXP1 JASPAR yes 118276305
chr1 40331342 40331363 IRF1 JASPAR yes 28297043
chr1 40331342 40331363 IRF1 JASPAR yes 118276306
chr1 40331343 40331358 FOXP1 JASPAR yes 28297044
chr1 40331343 40331358 FOXP1 JASPAR yes 118276307
chr1 40331343 40331364 IRF1 JASPAR yes 28297045
chr1 40331343 40331364 IRF1 JASPAR yes 118276308
chr1 40331344 40331359 FOXP1 JASPAR yes 28297046
chr1 40331344 40331359 FOXP1 JASPAR yes 118276309
chr1 40331344 40331365 IRF1 JASPAR yes 28297047
chr1 40331344 40331365 IRF1 JASPAR yes 118276310
chr1 40331345 40331360 FOXP1 JASPAR yes 28297048
chr1 40331345 40331360 FOXP1 JASPAR yes 118276311
chr1 40331345 40331366 IRF1 JASPAR yes 28297049
chr1 40331345 40331366 IRF1 JASPAR yes 118276312
chr1 40331346 40331361 FOXP1 JASPAR yes 28297050
chr1 40331346 40331361 FOXP1 JASPAR yes 118276313
chr1 40331346 40331367 IRF1 JASPAR yes 28297051
chr1 40331346 40331367 IRF1 JASPAR yes 118276314
chr1 40331347 40331362 FOXP1 JASPAR yes 28297052
chr1 40331347 40331362 FOXP1 JASPAR yes 118276315
chr1 40331347 40331368 IRF1 JASPAR yes 28297053
chr1 40331347 40331368 IRF1 JASPAR yes 118276316
chr1 40331348 40331363 FOXP1 JASPAR yes 28297054
chr1 40331348 40331363 FOXP1 JASPAR yes 118276317
chr1 40331350 40331365 FOXP1 JASPAR yes 28297055
chr1 40331350 40331365 FOXP1 JASPAR yes 118276318
chr1 40331351 40331372 IRF1 JASPAR yes 28297056
chr1 40331351 40331372 IRF1 JASPAR yes 118276319
chr1 40331352 40331367 FOXP1 JASPAR yes 28297057
chr1 40331352 40331367 FOXP1 JASPAR yes 118276320
chr1 40331352 40331373 IRF1 JASPAR yes 28297058
chr1 40331352 40331373 IRF1 JASPAR yes 118276321
chr1 40331356 40331377 IRF1 JASPAR yes 28297059
chr1 40331356 40331377 IRF1 JASPAR yes 118276322
chr1 40331357 40331372 FOXP1 JASPAR yes 28297060
chr1 40331357 40331372 FOXP1 JASPAR yes 118276323
chr1 40331357 40331378 IRF1 JASPAR yes 28297061
chr1 40331357 40331378 IRF1 JASPAR yes 118276324
chr1 40331368 40331387 PAX5 JASPAR yes 28297062
chr1 40331368 40331387 PAX5 JASPAR yes 118276325
chr1 40331391 40331401 ID4 JASPAR yes 28297063
chr1 40331391 40331401 TCF3 JASPAR yes 28297064
chr1 40331391 40331401 TCF4 JASPAR yes 28297065
chr1 40331391 40331401 ID4 JASPAR yes 118276326
chr1 40331391 40331401 TCF3 JASPAR yes 118276327
chr1 40331391 40331401 TCF4 JASPAR yes 118276328
chr1 40331392 40331401 SNAI2 JASPAR yes 28297066
chr1 40331392 40331401 SNAI2 JASPAR yes 118276329
chr1 40331393 40331398 USF2 TRANSFAC yes 28297067
chr1 40331393 40331398 USF2 TRANSFAC yes 118276330
chr1 40331422 40331440 RARA JASPAR yes 28297068
chr1 40331422 40331440 RARA JASPAR yes 118276331
chr1 40331427 40331433 MAZ TRANSFAC yes 28297069
chr1 40331427 40331433 MAZ TRANSFAC yes 118276332
chr1 40331432 40331436 ESR1 TRANSFAC yes 28297070
chr1 40331432 40331436 ESR1 TRANSFAC yes 118276333
chr1 40331435 40331439 YY1 TRANSFAC yes 28297071
chr1 40331435 40331439 YY1 TRANSFAC yes 118276334
chr1 40331471 40331482 CEBPB JASPAR yes 28297072
chr1 40331471 40331482 CEBPB JASPAR yes 118276335
chr1 40331472 40331483 CEBPA JASPAR yes 28297073
chr1 40331472 40331483 CEBPA JASPAR yes 118276336
chr1 40331495 40331499 LFA1 TRANSFAC yes 28297074
chr1 40331495 40331499 LFA1 TRANSFAC yes 118276337
SNP sites on vista1278[chr1:40331340-40331501]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40331357 rs72666956 A G
FOXP1 IRF1
251309
chr1 40331358 rs78865038 A G
FOXP1 IRF1
251310
chr1 40331407 rs187435727 A G no 251311
Genes possibly regulated by vista1278[chr1:40331340-40331501]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40222854 40254533 - BMP8B ENSG00000116985.6 40254533 0.81 1.0 552 23193
chr1 40235195 40237020 - OXCT2 ENSG00000198754.5 40237020 0.82 1.0 553 5680
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 82318
chr1 40361098 40367928 - MYCL ENSG00000116990.9 40367928 0.82 1.0 555 63573
chr1 40420802 40435638 + MFSD2A ENSG00000168389.13 40420802 0.96 1.0 556 10699
Expression level of Genes
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miRNAs possibly regulated by vista1278[chr1:40331340-40331501]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results