EnhancerDB
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  3. vista1279[chr1:40402545-40402801]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1279[chr1:40402545-40402801]
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Tissue distribution of vista1279
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Transcription factor that possibly regulate vista1279[chr1:40402545-40402801]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40402544 40402558 IRF8 JASPAR yes 28301306
chr1 40402544 40402558 IRF8 JASPAR yes 118276338
chr1 40402545 40402563 IRF2 JASPAR yes 28301307
chr1 40402545 40402563 IRF2 JASPAR yes 118276339
chr1 40402546 40402567 IRF1 JASPAR yes 28301308
chr1 40402546 40402567 IRF1 JASPAR yes 118276340
chr1 40402548 40402563 PRDM1 JASPAR yes 28301309
chr1 40402548 40402563 PRDM1 JASPAR yes 118276341
chr1 40402550 40402562 IRF1 JASPAR yes 28301310
chr1 40402550 40402562 IRF1 JASPAR yes 118276342
chr1 40402550 40402564 IRF7 JASPAR yes 28301311
chr1 40402550 40402564 IRF7 JASPAR yes 118276343
chr1 40402575 40402583 SP1 TRANSFAC yes 28301312
chr1 40402575 40402583 SP1 TRANSFAC yes 118276344
chr1 40402575 40402585 SP1 JASPAR yes 28301313
chr1 40402575 40402585 SP1 JASPAR yes 118276345
chr1 40402577 40402583 MAZ TRANSFAC yes 28301314
chr1 40402577 40402583 MAZ TRANSFAC yes 118276346
chr1 40402583 40402587 LFA1 TRANSFAC yes 28301315
chr1 40402583 40402587 LFA1 TRANSFAC yes 118276347
chr1 40402601 40402622 ZNF263 JASPAR yes 28301316
chr1 40402601 40402622 ZNF263 JASPAR yes 118276348
chr1 40402602 40402623 ZNF263 JASPAR yes 28301317
chr1 40402602 40402623 ZNF263 JASPAR yes 118276349
chr1 40402604 40402625 ZNF263 JASPAR yes 28301318
chr1 40402604 40402625 ZNF263 JASPAR yes 118276350
chr1 40402607 40402628 ZNF263 JASPAR yes 28301319
chr1 40402607 40402628 ZNF263 JASPAR yes 118276351
chr1 40402629 40402642 ELF1 JASPAR yes 28301320
chr1 40402629 40402642 ELF1 JASPAR yes 118276352
chr1 40402632 40402643 FLI1 JASPAR yes 28301321
chr1 40402632 40402643 FLI1 JASPAR yes 118276353
chr1 40402633 40402641 EHF JASPAR yes 28301322
chr1 40402633 40402641 FEV JASPAR yes 28301323
chr1 40402633 40402641 EHF JASPAR yes 118276354
chr1 40402633 40402641 FEV JASPAR yes 118276355
chr1 40402634 40402641 SPI1 JASPAR yes 28301324
chr1 40402634 40402641 SPI1 JASPAR yes 118276356
chr1 40402643 40402658 PRDM1 JASPAR yes 28301325
chr1 40402643 40402658 PRDM1 JASPAR yes 118276357
chr1 40402647 40402664 RARA JASPAR yes 28301326
chr1 40402647 40402664 RXRA JASPAR yes 28301327
chr1 40402647 40402664 RARA JASPAR yes 118276358
chr1 40402647 40402664 RXRA JASPAR yes 118276359
chr1 40402651 40402672 ZNF263 JASPAR yes 28301328
chr1 40402651 40402672 ZNF263 JASPAR yes 118276360
chr1 40402658 40402679 ZNF263 JASPAR yes 28301329
chr1 40402658 40402679 ZNF263 JASPAR yes 118276361
chr1 40402664 40402685 ZNF263 JASPAR yes 28301330
chr1 40402664 40402685 ZNF263 JASPAR yes 118276362
chr1 40402666 40402686 RREB1 JASPAR yes 28301331
chr1 40402666 40402686 RREB1 JASPAR yes 118276363
chr1 40402667 40402687 RREB1 JASPAR yes 28301332
chr1 40402667 40402687 RREB1 JASPAR yes 118276364
chr1 40402678 40402695 ZNF410 JASPAR yes 28301333
chr1 40402678 40402695 ZNF410 JASPAR yes 118276365
chr1 40402705 40402719 RXRB JASPAR yes 28301334
chr1 40402705 40402719 RXRB JASPAR yes 118276366
chr1 40402711 40402726 HNF4G JASPAR yes 28301335
chr1 40402711 40402726 HNF4G JASPAR yes 118276367
chr1 40402712 40402727 HNF4A JASPAR yes 28301336
chr1 40402712 40402727 HNF4A JASPAR yes 118276368
chr1 40402744 40402763 REST JASPAR yes 28301337
chr1 40402744 40402763 REST JASPAR yes 118276369
chr1 40402749 40402759 SP1 JASPAR yes 28301338
chr1 40402749 40402759 SP1 JASPAR yes 118276370
chr1 40402793 40402800 JUN TRANSFAC yes 28301339
chr1 40402793 40402800 JUN TRANSFAC yes 118276371
SNP sites on vista1279[chr1:40402545-40402801]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40402750 rs397737431 ACCCAG A
REST SP1
251974
chr1 40402750 rs576476084 ACCCAG A
REST SP1
251975
chr1 40402750 rs67134178 ACCCAG A
REST SP1
251976
chr1 40402750 rs71778642 ACCCAG A
REST SP1
251977
Genes possibly regulated by vista1279[chr1:40402545-40402801]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 46638
chr1 40361098 40367928 - MYCL ENSG00000116990.9 40367928 0.82 1.0 555 65383
chr1 40420802 40435638 + MFSD2A ENSG00000168389.13 40420802 0.96 1.0 556 81999
Expression level of Genes
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miRNAs possibly regulated by vista1279[chr1:40402545-40402801]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results