EnhancerDB
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  3. vista1280[chr1:40407211-40407326]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1280[chr1:40407211-40407326]
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Tissue distribution of vista1280
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Transcription factor that possibly regulate vista1280[chr1:40407211-40407326]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40407229 40407234 GATA2 JASPAR yes 28301754
chr1 40407229 40407234 GATA2 JASPAR yes 118276372
chr1 40407249 40407258 ZEB1 JASPAR yes 28301755
chr1 40407249 40407258 ZEB1 JASPAR yes 118276373
chr1 40407250 40407260 TCF4 JASPAR yes 28301756
chr1 40407250 40407260 TCF4 JASPAR yes 118276374
chr1 40407252 40407257 USF2 TRANSFAC yes 28301757
chr1 40407252 40407257 USF2 TRANSFAC yes 118276375
chr1 40407277 40407292 PRDM1 JASPAR yes 28301758
chr1 40407277 40407292 PRDM1 JASPAR yes 118276376
chr1 40407297 40407312 RFX5 JASPAR yes 28301759
chr1 40407297 40407312 RFX5 JASPAR yes 118276377
chr1 40407305 40407325 RREB1 JASPAR yes 28301760
chr1 40407305 40407325 RREB1 JASPAR yes 118276378
chr1 40407308 40407328 RREB1 JASPAR yes 28301761
chr1 40407308 40407328 RREB1 JASPAR yes 118276379
chr1 40407311 40407331 RREB1 JASPAR yes 28301762
chr1 40407311 40407331 RREB1 JASPAR yes 118276380
chr1 40407322 40407331 ZEB1 JASPAR yes 28301763
chr1 40407322 40407331 ZEB1 JASPAR yes 118276381
chr1 40407323 40407333 FIGLA JASPAR yes 28301764
chr1 40407323 40407333 TCF4 JASPAR yes 28301765
chr1 40407323 40407333 FIGLA JASPAR yes 118276382
chr1 40407323 40407333 TCF4 JASPAR yes 118276383
chr1 40407324 40407344 ESR1 JASPAR yes 28301766
chr1 40407324 40407344 ESR1 JASPAR yes 118276384
chr1 40407325 40407330 USF2 TRANSFAC yes 28301767
chr1 40407325 40407330 USF2 TRANSFAC yes 118276385
SNP sites on vista1280[chr1:40407211-40407326]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1280[chr1:40407211-40407326]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 41972
chr1 40361098 40367928 - MYCL ENSG00000116990.9 40367928 0.82 1.0 555 60717
chr1 40420802 40435638 + MFSD2A ENSG00000168389.13 40420802 0.96 1.0 556 86524
chr1 40505905 40538321 + CAP1 ENSG00000131236.12 40505905 0.84 0.99 557 1421
Expression level of Genes
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miRNAs possibly regulated by vista1280[chr1:40407211-40407326]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results