EnhancerDB
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  3. vista1281[chr1:40426190-40426638]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1281[chr1:40426190-40426638]
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Tissue distribution of vista1281
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Transcription factor that possibly regulate vista1281[chr1:40426190-40426638]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40426187 40426201 TLX1 JASPAR yes 28302888
chr1 40426187 40426201 TLX1 JASPAR yes 118276386
chr1 40426195 40426204 HIC2 JASPAR yes 28302889
chr1 40426195 40426204 HIC2 JASPAR yes 118276387
chr1 40426201 40426220 RFX2 JASPAR yes 28302890
chr1 40426201 40426220 RFX2 JASPAR yes 118276388
chr1 40426234 40426248 XBP1 JASPAR yes 28302891
chr1 40426234 40426248 XBP1 JASPAR yes 118276389
chr1 40426235 40426249 CREB3 JASPAR yes 28302892
chr1 40426235 40426249 CREB3L1 JASPAR yes 28302893
chr1 40426235 40426249 CREB3 JASPAR yes 118276390
chr1 40426235 40426249 CREB3L1 JASPAR yes 118276391
chr1 40426254 40426269 NFYB JASPAR yes 28302894
chr1 40426254 40426269 NFYB JASPAR yes 118276392
chr1 40426256 40426272 NFYA JASPAR yes 28302895
chr1 40426256 40426272 NFYA JASPAR yes 118276393
chr1 40426257 40426275 NFYA JASPAR yes 28302896
chr1 40426257 40426275 NFYA JASPAR yes 118276394
chr1 40426258 40426277 CTCF JASPAR yes 28302897
chr1 40426258 40426277 CTCF JASPAR yes 118276395
chr1 40426261 40426265 H1TF2 TRANSFAC yes 28302898
chr1 40426261 40426265 NFE TRANSFAC yes 28302899
chr1 40426261 40426265 SRF TRANSFAC yes 28302900
chr1 40426261 40426265 H1TF2 TRANSFAC yes 118276396
chr1 40426261 40426265 NFE TRANSFAC yes 118276397
chr1 40426261 40426265 SRF TRANSFAC yes 118276398
chr1 40426334 40426346 NHLH1 JASPAR yes 28302901
chr1 40426334 40426346 NHLH1 JASPAR yes 118276399
chr1 40426335 40426345 MSC JASPAR yes 28302902
chr1 40426335 40426345 NHLH1 JASPAR yes 28302903
chr1 40426335 40426345 MSC JASPAR yes 118276400
chr1 40426335 40426345 NHLH1 JASPAR yes 118276401
chr1 40426342 40426354 NHLH1 JASPAR yes 28302904
chr1 40426342 40426354 NHLH1 JASPAR yes 118276402
chr1 40426343 40426353 NHLH1 JASPAR yes 28302905
chr1 40426343 40426353 NHLH1 JASPAR yes 118276403
chr1 40426377 40426383 SOX10 JASPAR yes 28302906
chr1 40426377 40426383 SOX10 JASPAR yes 118276404
chr1 40426401 40426416 TFAP2C JASPAR yes 28302907
chr1 40426401 40426416 TFAP2C JASPAR yes 118276405
chr1 40426433 40426438 SP1 TRANSFAC yes 28302908
chr1 40426433 40426438 SP1 TRANSFAC yes 118276406
chr1 40426436 40426440 LFA1 TRANSFAC yes 28302909
chr1 40426436 40426440 LFA1 TRANSFAC yes 118276407
chr1 40426470 40426481 ELK4 JASPAR yes 28302910
chr1 40426470 40426481 FLI1 JASPAR yes 28302911
chr1 40426470 40426481 ELK4 JASPAR yes 118276408
chr1 40426470 40426481 FLI1 JASPAR yes 118276409
chr1 40426471 40426481 ETV6 JASPAR yes 28302912
chr1 40426471 40426481 ETV6 JASPAR yes 118276410
chr1 40426471 40426482 ELF5 JASPAR yes 28302913
chr1 40426471 40426482 ELF5 JASPAR yes 118276411
chr1 40426471 40426483 ELF1 JASPAR yes 28302914
chr1 40426471 40426483 ELF4 JASPAR yes 28302915
chr1 40426471 40426483 ELF1 JASPAR yes 118276412
chr1 40426471 40426483 ELF4 JASPAR yes 118276413
chr1 40426471 40426484 ELF1 JASPAR yes 28302916
chr1 40426471 40426484 ELF1 JASPAR yes 118276414
chr1 40426472 40426479 SPI1 JASPAR yes 28302917
chr1 40426472 40426479 SPI1 JASPAR yes 118276415
chr1 40426472 40426480 EHF JASPAR yes 28302918
chr1 40426472 40426480 FEV JASPAR yes 28302919
chr1 40426472 40426480 EHF JASPAR yes 118276416
chr1 40426472 40426480 FEV JASPAR yes 118276417
chr1 40426478 40426489 NRF1 JASPAR yes 28302920
chr1 40426478 40426489 NRF1 JASPAR yes 118276418
chr1 40426479 40426483 LFA1 TRANSFAC yes 28302921
chr1 40426479 40426483 LFA1 TRANSFAC yes 118276419
chr1 40426485 40426498 SMAD2 JASPAR yes 28302922
chr1 40426485 40426498 SMAD2 JASPAR yes 118276420
chr1 40426496 40426510 SPI1 JASPAR yes 28302923
chr1 40426496 40426510 SPI1 JASPAR yes 118276421
chr1 40426500 40426505 TFAP2A TRANSFAC yes 28302924
chr1 40426500 40426505 TFAP2A TRANSFAC yes 118276422
chr1 40426500 40426506 MZF1 JASPAR yes 28302925
chr1 40426500 40426506 MZF1 JASPAR yes 118276423
chr1 40426502 40426507 ETS2 TRANSFAC yes 28302926
chr1 40426502 40426507 ETS2 TRANSFAC yes 118276424
chr1 40426504 40426519 RFX5 JASPAR yes 28302927
chr1 40426504 40426519 RFX5 JASPAR yes 118276425
chr1 40426506 40426520 GLIS2 JASPAR yes 28302928
chr1 40426506 40426520 GLIS2 JASPAR yes 118276426
chr1 40426514 40426519 SP1 TRANSFAC yes 28302929
chr1 40426514 40426519 SP1 TRANSFAC yes 118276427
chr1 40426516 40426529 TFAP2B JASPAR yes 28302930
chr1 40426516 40426529 TFAP2B JASPAR yes 118276428
chr1 40426541 40426550 SNAI2 JASPAR yes 28302931
chr1 40426541 40426550 SNAI2 JASPAR yes 118276429
chr1 40426541 40426551 ID4 JASPAR yes 28302932
chr1 40426541 40426551 TCF3 JASPAR yes 28302933
chr1 40426541 40426551 TCF4 JASPAR yes 28302934
chr1 40426541 40426551 ID4 JASPAR yes 118276430
chr1 40426541 40426551 TCF3 JASPAR yes 118276431
chr1 40426541 40426551 TCF4 JASPAR yes 118276432
chr1 40426546 40426566 TP63 JASPAR yes 28302935
chr1 40426546 40426566 TP63 JASPAR yes 118276433
chr1 40426547 40426565 TP73 JASPAR yes 28302936
chr1 40426547 40426565 TP73 JASPAR yes 118276434
chr1 40426549 40426564 TP53 JASPAR yes 28302937
chr1 40426549 40426564 TP53 JASPAR yes 118276435
chr1 40426561 40426576 RUNX2 JASPAR yes 28302938
chr1 40426561 40426576 RUNX2 JASPAR yes 118276436
chr1 40426578 40426598 TP63 JASPAR yes 28302939
chr1 40426578 40426598 TP63 JASPAR yes 118276437
chr1 40426602 40426608 YY1 JASPAR yes 28302940
chr1 40426602 40426608 YY1 JASPAR yes 118276438
chr1 40426630 40426643 NR2F1 JASPAR yes 28302941
chr1 40426630 40426643 NR2F1 JASPAR yes 118276439
SNP sites on vista1281[chr1:40426190-40426638]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40426212 rs552313356 C T
RFX2
252165
Genes possibly regulated by vista1281[chr1:40426190-40426638]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 22993
chr1 40361098 40367928 - MYCL ENSG00000116990.9 40367928 0.82 1.0 555 41738
chr1 40420802 40435638 + MFSD2A ENSG00000168389.13 40420802 0.96 1.0 556 94612
chr1 40505905 40538321 + CAP1 ENSG00000131236.12 40505905 0.84 0.99 557 20733
Expression level of Genes
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miRNAs possibly regulated by vista1281[chr1:40426190-40426638]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results