EnhancerDB
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  3. vista1283[chr1:40504860-40505165]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1283[chr1:40504860-40505165]
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Tissue distribution of vista1283
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Transcription factor that possibly regulate vista1283[chr1:40504860-40505165]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40504870 40504873 MYB TRANSFAC yes 28311276
chr1 40504870 40504873 MYB TRANSFAC yes 118276462
chr1 40504875 40504892 RARA JASPAR yes 28311277
chr1 40504875 40504892 RARA JASPAR yes 118276463
chr1 40504881 40504894 SMAD2 JASPAR yes 28311278
chr1 40504881 40504894 SMAD2 JASPAR yes 118276464
chr1 40504986 40504990 NFE TRANSFAC yes 28311279
chr1 40504986 40504990 NFE TRANSFAC yes 118276465
chr1 40504996 40505006 POU6F2 JASPAR yes 28311280
chr1 40504996 40505006 POU6F2 JASPAR yes 118276466
chr1 40504997 40505007 ALX3 JASPAR yes 28311281
chr1 40504997 40505007 EMX1 JASPAR yes 28311282
chr1 40504997 40505007 EMX2 JASPAR yes 28311283
chr1 40504997 40505007 EN2 JASPAR yes 28311284
chr1 40504997 40505007 ESX1 JASPAR yes 28311285
chr1 40504997 40505007 EVX1 JASPAR yes 28311286
chr1 40504997 40505007 EVX2 JASPAR yes 28311287
chr1 40504997 40505007 GBX1 JASPAR yes 28311288
chr1 40504997 40505007 GBX2 JASPAR yes 28311289
chr1 40504997 40505007 GSX1 JASPAR yes 28311290
chr1 40504997 40505007 GSX2 JASPAR yes 28311291
chr1 40504997 40505007 HESX1 JASPAR yes 28311292
chr1 40504997 40505007 HOXA2 JASPAR yes 28311293
chr1 40504997 40505007 HOXB2 JASPAR yes 28311294
chr1 40504997 40505007 HOXB3 JASPAR yes 28311295
chr1 40504997 40505007 LBX2 JASPAR yes 28311296
chr1 40504997 40505007 LHX2 JASPAR yes 28311297
chr1 40504997 40505007 LHX6 JASPAR yes 28311298
chr1 40504997 40505007 MEOX1 JASPAR yes 28311299
chr1 40504997 40505007 MEOX2 JASPAR yes 28311300
chr1 40504997 40505007 MIXL1 JASPAR yes 28311301
chr1 40504997 40505007 MNX1 JASPAR yes 28311302
chr1 40504997 40505007 NOTO JASPAR yes 28311303
chr1 40504997 40505007 POU6F1 JASPAR yes 28311304
chr1 40504997 40505007 RAX JASPAR yes 28311305
chr1 40504997 40505007 ALX3 JASPAR yes 118276467
chr1 40504997 40505007 EMX1 JASPAR yes 118276468
chr1 40504997 40505007 EMX2 JASPAR yes 118276469
chr1 40504997 40505007 EN2 JASPAR yes 118276470
chr1 40504997 40505007 ESX1 JASPAR yes 118276471
chr1 40504997 40505007 EVX1 JASPAR yes 118276472
chr1 40504997 40505007 EVX2 JASPAR yes 118276473
chr1 40504997 40505007 GBX1 JASPAR yes 118276474
chr1 40504997 40505007 GBX2 JASPAR yes 118276475
chr1 40504997 40505007 GSX1 JASPAR yes 118276476
chr1 40504997 40505007 GSX2 JASPAR yes 118276477
chr1 40504997 40505007 HESX1 JASPAR yes 118276478
chr1 40504997 40505007 HOXA2 JASPAR yes 118276479
chr1 40504997 40505007 HOXB2 JASPAR yes 118276480
chr1 40504997 40505007 HOXB3 JASPAR yes 118276481
chr1 40504997 40505007 LBX2 JASPAR yes 118276482
chr1 40504997 40505007 LHX2 JASPAR yes 118276483
chr1 40504997 40505007 LHX6 JASPAR yes 118276484
chr1 40504997 40505007 MEOX1 JASPAR yes 118276485
chr1 40504997 40505007 MEOX2 JASPAR yes 118276486
chr1 40504997 40505007 MIXL1 JASPAR yes 118276487
chr1 40504997 40505007 MNX1 JASPAR yes 118276488
chr1 40504997 40505007 NOTO JASPAR yes 118276489
chr1 40504997 40505007 POU6F1 JASPAR yes 118276490
chr1 40504997 40505007 RAX JASPAR yes 118276491
chr1 40504998 40505006 BSX JASPAR yes 28311306
chr1 40504998 40505006 DLX6 JASPAR yes 28311307
chr1 40504998 40505006 EN1 JASPAR yes 28311308
chr1 40504998 40505006 ISX JASPAR yes 28311309
chr1 40504998 40505006 LBX1 JASPAR yes 28311310
chr1 40504998 40505006 LHX9 JASPAR yes 28311311
chr1 40504998 40505006 LMX1A JASPAR yes 28311312
chr1 40504998 40505006 LMX1B JASPAR yes 28311313
chr1 40504998 40505006 NKX6-1 JASPAR yes 28311314
chr1 40504998 40505006 NKX6-2 JASPAR yes 28311315
chr1 40504998 40505006 PAX4 JASPAR yes 28311316
chr1 40504998 40505006 PDX1 JASPAR yes 28311317
chr1 40504998 40505006 PRRX1 JASPAR yes 28311318
chr1 40504998 40505006 RAX2 JASPAR yes 28311319
chr1 40504998 40505006 SHOX JASPAR yes 28311320
chr1 40504998 40505006 UNCX JASPAR yes 28311321
chr1 40504998 40505006 VAX1 JASPAR yes 28311322
chr1 40504998 40505006 VAX2 JASPAR yes 28311323
chr1 40504998 40505006 VSX1 JASPAR yes 28311324
chr1 40504998 40505006 VSX2 JASPAR yes 28311325
chr1 40504998 40505006 BSX JASPAR yes 118276492
chr1 40504998 40505006 DLX6 JASPAR yes 118276493
chr1 40504998 40505006 EN1 JASPAR yes 118276494
chr1 40504998 40505006 ISX JASPAR yes 118276495
chr1 40504998 40505006 LBX1 JASPAR yes 118276496
chr1 40504998 40505006 LHX9 JASPAR yes 118276497
chr1 40504998 40505006 LMX1A JASPAR yes 118276498
chr1 40504998 40505006 LMX1B JASPAR yes 118276499
chr1 40504998 40505006 NKX6-1 JASPAR yes 118276500
chr1 40504998 40505006 NKX6-2 JASPAR yes 118276501
chr1 40504998 40505006 PAX4 JASPAR yes 118276502
chr1 40504998 40505006 PDX1 JASPAR yes 118276503
chr1 40504998 40505006 PRRX1 JASPAR yes 118276504
chr1 40504998 40505006 RAX2 JASPAR yes 118276505
chr1 40504998 40505006 SHOX JASPAR yes 118276506
chr1 40504998 40505006 UNCX JASPAR yes 118276507
chr1 40504998 40505006 VAX1 JASPAR yes 118276508
chr1 40504998 40505006 VAX2 JASPAR yes 118276509
chr1 40504998 40505006 VSX1 JASPAR yes 118276510
chr1 40504998 40505006 VSX2 JASPAR yes 118276511
chr1 40505018 40505031 SMAD2 JASPAR yes 28311326
chr1 40505018 40505031 SMAD2 JASPAR yes 118276512
chr1 40505024 40505037 ZBTB18 JASPAR yes 28311327
chr1 40505024 40505037 ZBTB18 JASPAR yes 118276513
chr1 40505037 40505042 ETS2 TRANSFAC yes 28311328
chr1 40505037 40505042 ETS2 TRANSFAC yes 118276514
chr1 40505041 40505047 TCF1 TRANSFAC yes 28311329
chr1 40505041 40505047 TCF1 TRANSFAC yes 118276515
chr1 40505054 40505072 RARA JASPAR yes 28311330
chr1 40505054 40505072 RARA JASPAR yes 118276516
chr1 40505061 40505074 NR2F1 JASPAR yes 28311331
chr1 40505061 40505074 NR2F1 JASPAR yes 118276517
chr1 40505063 40505074 ESRRA JASPAR yes 28311332
chr1 40505063 40505074 ESRRB JASPAR yes 28311333
chr1 40505063 40505074 ESRRA JASPAR yes 118276518
chr1 40505063 40505074 ESRRB JASPAR yes 118276519
chr1 40505064 40505072 NR4A2 JASPAR yes 28311334
chr1 40505064 40505072 NR4A2 JASPAR yes 118276520
chr1 40505069 40505078 NFIX JASPAR yes 28311335
chr1 40505069 40505078 NFIX JASPAR yes 118276521
chr1 40505070 40505076 NFIC JASPAR yes 28311336
chr1 40505070 40505076 NFIC JASPAR yes 118276522
chr1 40505084 40505098 SPI1 JASPAR yes 28311337
chr1 40505084 40505098 SPIC JASPAR yes 28311338
chr1 40505084 40505098 SPI1 JASPAR yes 118276523
chr1 40505084 40505098 SPIC JASPAR yes 118276524
chr1 40505092 40505096 YY1 TRANSFAC yes 28311339
chr1 40505092 40505096 YY1 TRANSFAC yes 118276525
chr1 40505107 40505111 LFA1 TRANSFAC yes 28311340
chr1 40505107 40505111 LFA1 TRANSFAC yes 118276526
chr1 40505120 40505132 ZBTB7B JASPAR yes 28311341
chr1 40505120 40505132 ZBTB7C JASPAR yes 28311342
chr1 40505120 40505132 ZBTB7B JASPAR yes 118276527
chr1 40505120 40505132 ZBTB7C JASPAR yes 118276528
chr1 40505148 40505161 POU2F2 JASPAR yes 28311343
chr1 40505148 40505161 POU2F2 JASPAR yes 118276529
SNP sites on vista1283[chr1:40504860-40505165]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40504860 rs190099606 C G no 253027
Genes possibly regulated by vista1283[chr1:40504860-40505165]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40420802 40435638 + MFSD2A ENSG00000168389.13 40420802 0.96 1.0 556 15942
chr1 40505905 40538321 + CAP1 ENSG00000131236.12 40505905 0.84 0.99 557 99260
chr1 40538379 40563375 - PPT1 ENSG00000131238.12 40563375 0.71 0.98 558 41790
Expression level of Genes
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miRNAs possibly regulated by vista1283[chr1:40504860-40505165]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results