EnhancerDB
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  3. vista1285[chr1:40606256-40606595]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1285[chr1:40606256-40606595]
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Tissue distribution of vista1285
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Transcription factor that possibly regulate vista1285[chr1:40606256-40606595]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40606254 40606275 IRF1 JASPAR yes 28317187
chr1 40606254 40606275 IRF1 JASPAR yes 118276587
chr1 40606256 40606271 STAT2 JASPAR yes 28317188
chr1 40606256 40606271 STAT2 JASPAR yes 118276588
chr1 40606258 40606270 IRF1 JASPAR yes 28317189
chr1 40606258 40606270 IRF1 JASPAR yes 118276589
chr1 40606258 40606272 IRF7 JASPAR yes 28317190
chr1 40606258 40606272 IRF8 JASPAR yes 28317191
chr1 40606258 40606272 IRF7 JASPAR yes 118276590
chr1 40606258 40606272 IRF8 JASPAR yes 118276591
chr1 40606258 40606273 IRF9 JASPAR yes 28317192
chr1 40606258 40606273 IRF9 JASPAR yes 118276592
chr1 40606259 40606277 IRF2 JASPAR yes 28317193
chr1 40606259 40606277 IRF2 JASPAR yes 118276593
chr1 40606260 40606281 IRF1 JASPAR yes 28317194
chr1 40606260 40606281 IRF1 JASPAR yes 118276594
chr1 40606262 40606277 STAT2 JASPAR yes 28317195
chr1 40606262 40606277 STAT2 JASPAR yes 118276595
chr1 40606264 40606278 IRF7 JASPAR yes 28317196
chr1 40606264 40606278 IRF8 JASPAR yes 28317197
chr1 40606264 40606278 IRF7 JASPAR yes 118276596
chr1 40606264 40606278 IRF8 JASPAR yes 118276597
chr1 40606264 40606279 IRF9 JASPAR yes 28317198
chr1 40606264 40606279 IRF9 JASPAR yes 118276598
chr1 40606267 40606277 MEF2A JASPAR yes 28317199
chr1 40606267 40606277 MEF2A JASPAR yes 118276599
chr1 40606362 40606376 STAT1 JASPAR yes 28317200
chr1 40606362 40606376 STAT1 JASPAR yes 118276600
chr1 40606366 40606371 ETS2 TRANSFAC yes 28317201
chr1 40606366 40606371 ETS2 TRANSFAC yes 118276601
chr1 40606379 40606391 HNF1B JASPAR yes 28317202
chr1 40606379 40606391 HNF1B JASPAR yes 118276602
chr1 40606389 40606401 BHLHE23 JASPAR yes 28317203
chr1 40606389 40606401 BHLHE23 JASPAR yes 118276603
chr1 40606390 40606400 OLIG3 JASPAR yes 28317204
chr1 40606390 40606400 OLIG3 JASPAR yes 118276604
chr1 40606392 40606410 TP53 JASPAR yes 28317205
chr1 40606392 40606410 TP53 JASPAR yes 118276605
chr1 40606396 40606406 SMAD3 JASPAR yes 28317206
chr1 40606396 40606406 SMAD3 JASPAR yes 118276606
chr1 40606433 40606443 TEAD1 JASPAR yes 28317207
chr1 40606433 40606443 TEAD1 JASPAR yes 118276607
chr1 40606434 40606442 TEAD3 JASPAR yes 28317208
chr1 40606434 40606442 TEAD3 JASPAR yes 118276608
chr1 40606477 40606487 MSC JASPAR yes 28317209
chr1 40606477 40606487 MSC JASPAR yes 118276609
chr1 40606484 40606495 HOXC13 JASPAR yes 28317210
chr1 40606484 40606495 HOXC13 JASPAR yes 118276610
chr1 40606485 40606501 POU4F2 JASPAR yes 28317211
chr1 40606485 40606501 POU4F3 JASPAR yes 28317212
chr1 40606485 40606501 POU4F2 JASPAR yes 118276611
chr1 40606485 40606501 POU4F3 JASPAR yes 118276612
chr1 40606487 40606501 POU4F1 JASPAR yes 28317213
chr1 40606487 40606501 POU4F1 JASPAR yes 118276613
chr1 40606488 40606500 HNF1B JASPAR yes 28317214
chr1 40606488 40606500 HNF1B JASPAR yes 118276614
chr1 40606531 40606535 YY1 TRANSFAC yes 28317215
chr1 40606531 40606535 YY1 TRANSFAC yes 118276615
chr1 40606547 40606551 YY1 TRANSFAC yes 28317216
chr1 40606547 40606551 YY1 TRANSFAC yes 118276616
chr1 40606553 40606558 MYC TRANSFAC yes 28317217
chr1 40606553 40606558 MYC TRANSFAC yes 118276617
chr1 40606563 40606574 NRL JASPAR yes 28317218
chr1 40606563 40606574 NRL JASPAR yes 118276618
chr1 40606579 40606587 HOXA5 JASPAR yes 28317219
chr1 40606579 40606587 HOXA5 JASPAR yes 118276619
chr1 40606595 40606610 RUNX2 JASPAR yes 28317220
chr1 40606595 40606610 RUNX2 JASPAR yes 118276620
SNP sites on vista1285[chr1:40606256-40606595]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40606308 rs532275573 G C no 253665
chr1 40606538 rs72670605 A G no 253666
chr1 40606592 rs61780366 T C no 253667
Genes possibly regulated by vista1285[chr1:40606256-40606595]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40538379 40563375 - PPT1 ENSG00000131238.12 40563375 0.71 0.98 558 57119
chr1 40627045 40706593 + RLF ENSG00000117000.8 40627045 0.7 0.99 559 79550
Expression level of Genes
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miRNAs possibly regulated by vista1285[chr1:40606256-40606595]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results