EnhancerDB
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  3. vista1286[chr1:40628781-40629153]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1286[chr1:40628781-40629153]
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Tissue distribution of vista1286
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Transcription factor that possibly regulate vista1286[chr1:40628781-40629153]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40628781 40628784 MYB TRANSFAC yes 118276621
chr1 40628793 40628800 NKX3-1 JASPAR yes 118276622
chr1 40628793 40628811 RARA JASPAR yes 118276623
chr1 40628799 40628812 POU3F3 JASPAR yes 118276624
chr1 40628803 40628818 HNF1A JASPAR yes 118276625
chr1 40628804 40628814 ALX3 JASPAR yes 118276626
chr1 40628804 40628814 HOXB2 JASPAR yes 118276627
chr1 40628804 40628814 MNX1 JASPAR yes 118276628
chr1 40628804 40628816 HNF1B JASPAR yes 118276629
chr1 40628804 40628816 MEF2A JASPAR yes 118276630
chr1 40628804 40628817 HNF1B JASPAR yes 118276631
chr1 40628804 40628818 POU4F1 JASPAR yes 118276632
chr1 40628804 40628820 POU4F2 JASPAR yes 118276633
chr1 40628804 40628820 POU4F3 JASPAR yes 118276634
chr1 40628805 40628813 LMX1A JASPAR yes 118276635
chr1 40628805 40628813 LMX1B JASPAR yes 118276636
chr1 40628805 40628813 NKX6-1 JASPAR yes 118276637
chr1 40628805 40628813 NKX6-2 JASPAR yes 118276638
chr1 40628805 40628813 VAX1 JASPAR yes 118276639
chr1 40628805 40628813 VAX2 JASPAR yes 118276640
chr1 40628805 40628813 VSX1 JASPAR yes 118276641
chr1 40628805 40628813 VSX2 JASPAR yes 118276642
chr1 40628810 40628814 TEAD2 TRANSFAC yes 118276643
chr1 40628810 40628815 TBP TRANSFAC yes 118276644
chr1 40628810 40628816 TMF TRANSFAC yes 118276645
chr1 40628820 40628838 MAFF JASPAR yes 118276646
chr1 40628822 40628837 MAFK JASPAR yes 118276647
chr1 40628840 40628843 MYB TRANSFAC yes 118276648
chr1 40628885 40628899 POU1F1 JASPAR yes 118276649
chr1 40628889 40628903 JUN JASPAR yes 118276650
chr1 40628891 40628902 BATF JASPAR yes 118276651
chr1 40628892 40628903 FOSL2 JASPAR yes 118276652
chr1 40628892 40628903 JUNB JASPAR yes 118276653
chr1 40628893 40628904 FOS JASPAR yes 118276654
chr1 40628893 40628904 FOSL1 JASPAR yes 118276655
chr1 40628893 40628904 JUND JASPAR yes 118276656
chr1 40628893 40628904 NFE2 JASPAR yes 118276657
chr1 40628894 40628903 JDP2 JASPAR yes 118276658
chr1 40628894 40628905 FOSL2 JASPAR yes 118276659
chr1 40628894 40628905 JUNB JASPAR yes 118276660
chr1 40628894 40628908 JUN JASPAR yes 118276661
chr1 40628897 40628907 MAX JASPAR yes 118276662
chr1 40628897 40628908 USF1 JASPAR yes 118276663
chr1 40628897 40628908 USF2 JASPAR yes 118276664
chr1 40628898 40628908 BHLHE40 JASPAR yes 118276665
chr1 40628898 40628908 BHLHE41 JASPAR yes 118276666
chr1 40628898 40628908 MLXIPL JASPAR yes 118276667
chr1 40628898 40628908 MLX JASPAR yes 118276668
chr1 40628898 40628908 SREBF2 JASPAR yes 118276669
chr1 40628898 40628908 TFE3 JASPAR yes 118276670
chr1 40628898 40628908 TFEB JASPAR yes 118276671
chr1 40628900 40628905 MYC TRANSFAC yes 118276672
chr1 40628900 40628905 USF1 TRANSFAC yes 118276673
chr1 40628900 40628905 USF2 TRANSFAC yes 118276674
chr1 40628905 40628926 ZNF263 JASPAR yes 118276675
chr1 40628915 40628920 SP1 TRANSFAC yes 118276676
chr1 40628917 40628922 TFAP2A TRANSFAC yes 118276677
chr1 40628917 40628923 MZF1 JASPAR yes 118276678
chr1 40628932 40628941 NFIX JASPAR yes 118276679
chr1 40628932 40628942 NFIA JASPAR yes 118276680
chr1 40628934 40628940 NFIC JASPAR yes 118276681
chr1 40628947 40628952 NFY TRANSFAC yes 118276682
chr1 40628957 40628973 ZNF143 JASPAR yes 118276683
chr1 40628973 40628983 SP1 JASPAR yes 118276684
chr1 40628973 40628994 ZNF263 JASPAR yes 118276685
chr1 40628974 40628981 CEBPA TRANSFAC yes 118276686
chr1 40628975 40628989 STAT1 JASPAR yes 118276687
chr1 40628975 40628990 PRDM1 JASPAR yes 118276688
chr1 40628975 40628990 STAT2 JASPAR yes 118276689
chr1 40628976 40628986 MZF1 JASPAR yes 118276690
chr1 40629010 40629021 FOXP2 JASPAR yes 118276691
chr1 40629011 40629019 FOXO3 JASPAR yes 118276692
chr1 40629015 40629025 MYF6 JASPAR yes 118276693
chr1 40629041 40629055 PAX6 JASPAR yes 118276694
chr1 40629081 40629092 DMRT3 JASPAR yes 118276695
chr1 40629085 40629088 MYB TRANSFAC yes 118276696
chr1 40629096 40629101 MYB TRANSFAC yes 118276697
chr1 40629124 40629132 FOXL1 JASPAR yes 118276698
chr1 40629138 40629146 FOXL1 JASPAR yes 118276699
SNP sites on vista1286[chr1:40628781-40629153]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40628788 rs11419548 G GT no 253806
chr1 40628822 rs7529068 G A
MAFF MAFK
253807
chr1 40629088 rs142351276 A C
DMRT3 MYB
253808
Genes possibly regulated by vista1286[chr1:40628781-40629153]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40538379 40563375 - PPT1 ENSG00000131238.12 40563375 0.71 0.98 558 34594
chr1 40627045 40706593 + RLF ENSG00000117000.8 40627045 0.7 0.99 559 98264
chr1 40711619 40717363 + TMCO2 ENSG00000188800.5 40711619 0.9 1.0 560 17534
chr1 40723779 40759856 + ZMPSTE24 ENSG00000084073.4 40723779 0.63 0.98 561 5374
Expression level of Genes
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miRNAs possibly regulated by vista1286[chr1:40628781-40629153]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results