EnhancerDB
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  3. vista1294[chr1:40851431-40851768]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1294[chr1:40851431-40851768]
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Tissue distribution of vista1294
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Transcription factor that possibly regulate vista1294[chr1:40851431-40851768]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40848589 40852477 POLR2A UCSC Txn Factor no Conserved 107802923
chr1 40851444 40851453 PITX3 JASPAR yes 28327205
chr1 40851444 40851453 PITX3 JASPAR yes 118277057
chr1 40851444 40851454 GSC2 JASPAR yes 28327206
chr1 40851444 40851454 GSC2 JASPAR yes 118277058
chr1 40851445 40851453 OTX1 JASPAR yes 28327207
chr1 40851445 40851453 OTX2 JASPAR yes 28327208
chr1 40851445 40851453 OTX1 JASPAR yes 118277059
chr1 40851445 40851453 OTX2 JASPAR yes 118277060
chr1 40851460 40851464 YY1 TRANSFAC yes 28327209
chr1 40851460 40851464 YY1 TRANSFAC yes 118277061
chr1 40851477 40851486 NKX2-8 JASPAR yes 28327210
chr1 40851477 40851486 NKX2-8 JASPAR yes 118277062
chr1 40851483 40851497 MTF1 JASPAR yes 28327211
chr1 40851483 40851497 MTF1 JASPAR yes 118277063
chr1 40851490 40851508 NR3C1 JASPAR yes 28327212
chr1 40851490 40851508 NR3C1 JASPAR yes 118277064
chr1 40851491 40851506 AR JASPAR yes 28327213
chr1 40851491 40851506 AR JASPAR yes 118277065
chr1 40851491 40851508 NR3C1 JASPAR yes 28327214
chr1 40851491 40851508 NR3C2 JASPAR yes 28327215
chr1 40851491 40851508 NR3C1 JASPAR yes 118277066
chr1 40851491 40851508 NR3C2 JASPAR yes 118277067
chr1 40851491 40851509 NR3C1 JASPAR yes 28327216
chr1 40851491 40851509 NR3C1 JASPAR yes 118277068
chr1 40851493 40851508 AR JASPAR yes 28327217
chr1 40851493 40851508 AR JASPAR yes 118277069
chr1 40851494 40851509 LEF1 JASPAR yes 28327218
chr1 40851494 40851509 LEF1 JASPAR yes 118277070
chr1 40851496 40851500 YY1 TRANSFAC yes 28327219
chr1 40851496 40851500 YY1 TRANSFAC yes 118277071
chr1 40851498 40851504 TCF4 TRANSFAC yes 28327220
chr1 40851498 40851504 TCF4 TRANSFAC yes 118277072
chr1 40851506 40851527 IRF1 JASPAR yes 28327221
chr1 40851506 40851527 IRF1 JASPAR yes 118277073
chr1 40851508 40851511 MYB TRANSFAC yes 28327222
chr1 40851508 40851511 MYB TRANSFAC yes 118277074
chr1 40851508 40851519 FLI1 JASPAR yes 28327223
chr1 40851508 40851519 FLI1 JASPAR yes 118277075
chr1 40851508 40851521 ELF3 JASPAR yes 28327224
chr1 40851508 40851521 ELF3 JASPAR yes 118277076
chr1 40851508 40851523 STAT2 JASPAR yes 28327225
chr1 40851508 40851523 STAT2 JASPAR yes 118277077
chr1 40851509 40851519 ETV6 JASPAR yes 28327226
chr1 40851509 40851519 ETV6 JASPAR yes 118277078
chr1 40851509 40851520 ELF5 JASPAR yes 28327227
chr1 40851509 40851520 ELF5 JASPAR yes 118277079
chr1 40851509 40851521 EHF JASPAR yes 28327228
chr1 40851509 40851521 ELF4 JASPAR yes 28327229
chr1 40851509 40851521 EHF JASPAR yes 118277080
chr1 40851509 40851521 ELF4 JASPAR yes 118277081
chr1 40851509 40851522 ELF1 JASPAR yes 28327230
chr1 40851509 40851522 ELF1 JASPAR yes 118277082
chr1 40851509 40851523 SPI1 JASPAR yes 28327231
chr1 40851509 40851523 SPIC JASPAR yes 28327232
chr1 40851509 40851523 SPI1 JASPAR yes 118277083
chr1 40851509 40851523 SPIC JASPAR yes 118277084
chr1 40851510 40851517 SPI1 JASPAR yes 28327233
chr1 40851510 40851517 SPI1 JASPAR yes 118277085
chr1 40851510 40851518 EHF JASPAR yes 28327234
chr1 40851510 40851518 EHF JASPAR yes 118277086
chr1 40851512 40851519 SPIB JASPAR yes 28327235
chr1 40851512 40851519 SPIB JASPAR yes 118277087
chr1 40851528 40851531 MYB TRANSFAC yes 28327236
chr1 40851528 40851531 MYB TRANSFAC yes 118277088
chr1 40851530 40851540 ETV3 JASPAR yes 28327237
chr1 40851530 40851540 ETV3 JASPAR yes 118277089
chr1 40851533 40851543 NFKB1 JASPAR yes 28327238
chr1 40851533 40851543 REL JASPAR yes 28327239
chr1 40851533 40851543 NFKB1 JASPAR yes 118277090
chr1 40851533 40851543 REL JASPAR yes 118277091
chr1 40851538 40851544 MZF1 JASPAR yes 28327240
chr1 40851538 40851544 MZF1 JASPAR yes 118277092
chr1 40851548 40851559 FOXH1 JASPAR yes 28327241
chr1 40851548 40851559 FOXH1 JASPAR yes 118277093
chr1 40851549 40851555 ZNF354C JASPAR yes 28327242
chr1 40851549 40851555 ZNF354C JASPAR yes 118277094
chr1 40851557 40851563 HiNF-A TRANSFAC yes 28327243
chr1 40851557 40851563 HiNF-A TRANSFAC yes 118277095
chr1 40851573 40851587 STAT1 JASPAR yes 28327244
chr1 40851573 40851587 STAT1 JASPAR yes 118277096
chr1 40851591 40851609 NR3C1 JASPAR yes 28327245
chr1 40851591 40851609 NR3C1 JASPAR yes 118277097
chr1 40851592 40851597 ETS2 TRANSFAC yes 28327246
chr1 40851592 40851597 ETS2 TRANSFAC yes 118277098
chr1 40851592 40851600 FEV JASPAR yes 28327247
chr1 40851592 40851600 FEV JASPAR yes 118277099
chr1 40851593 40851600 SPI1 JASPAR yes 28327248
chr1 40851593 40851600 SPI1 JASPAR yes 118277100
chr1 40851607 40851627 RREB1 JASPAR yes 28327249
chr1 40851607 40851627 RREB1 JASPAR yes 118277101
chr1 40851611 40851620 SRY JASPAR yes 28327250
chr1 40851611 40851620 SRY JASPAR yes 118277102
chr1 40851615 40851635 RREB1 JASPAR yes 28327251
chr1 40851615 40851635 RREB1 JASPAR yes 118277103
chr1 40851616 40851628 ZBTB7B JASPAR yes 28327252
chr1 40851616 40851628 ZBTB7C JASPAR yes 28327253
chr1 40851616 40851628 ZBTB7B JASPAR yes 118277104
chr1 40851616 40851628 ZBTB7C JASPAR yes 118277105
chr1 40851617 40851629 ZBTB7A JASPAR yes 28327254
chr1 40851617 40851629 ZBTB7A JASPAR yes 118277106
chr1 40851628 40851634 TCF4 TRANSFAC yes 28327255
chr1 40851628 40851634 TCF4 TRANSFAC yes 118277107
chr1 40851641 40851656 MEF2A JASPAR yes 28327256
chr1 40851641 40851656 MEF2A JASPAR yes 118277108
chr1 40851656 40851671 HSF1 JASPAR yes 28327257
chr1 40851656 40851671 HSF1 JASPAR yes 118277109
chr1 40851657 40851670 HSF1 JASPAR yes 28327258
chr1 40851657 40851670 HSF2 JASPAR yes 28327259
chr1 40851657 40851670 HSF4 JASPAR yes 28327260
chr1 40851657 40851670 HSF1 JASPAR yes 118277110
chr1 40851657 40851670 HSF2 JASPAR yes 118277111
chr1 40851657 40851670 HSF4 JASPAR yes 118277112
chr1 40851677 40851692 JUND JASPAR yes 28327261
chr1 40851677 40851692 JUND JASPAR yes 118277113
chr1 40851679 40851693 ATF7 JASPAR yes 28327262
chr1 40851679 40851693 BATF3 JASPAR yes 28327263
chr1 40851679 40851693 ATF7 JASPAR yes 118277114
chr1 40851679 40851693 BATF3 JASPAR yes 118277115
chr1 40851680 40851692 HLF JASPAR yes 28327264
chr1 40851680 40851692 JDP2 JASPAR yes 28327265
chr1 40851680 40851692 HLF JASPAR yes 118277116
chr1 40851680 40851692 JDP2 JASPAR yes 118277117
chr1 40851680 40851695 JUND JASPAR yes 28327266
chr1 40851680 40851695 JUND JASPAR yes 118277118
chr1 40851681 40851690 JUN TRANSFAC yes 28327267
chr1 40851681 40851690 JUN TRANSFAC yes 118277119
chr1 40851681 40851694 JUN JASPAR yes 28327268
chr1 40851681 40851694 JUN JASPAR yes 118277120
chr1 40851682 40851689 JUN TRANSFAC yes 28327269
chr1 40851682 40851689 JUN TRANSFAC yes 118277121
chr1 40851720 40851724 LFA1 TRANSFAC yes 28327270
chr1 40851720 40851724 LFA1 TRANSFAC yes 118277122
chr1 40851734 40851740 TCF4 TRANSFAC yes 28327271
chr1 40851734 40851740 TCF4 TRANSFAC yes 118277123
chr1 40851739 40851754 FOXA1 JASPAR yes 28327272
chr1 40851739 40851754 FOXA1 JASPAR yes 118277124
chr1 40851741 40851753 FOXC2 JASPAR yes 28327273
chr1 40851741 40851753 FOXC2 JASPAR yes 118277125
chr1 40851742 40851750 FOXO3 JASPAR yes 28327274
chr1 40851742 40851750 FOXO3 JASPAR yes 118277126
chr1 40851742 40851753 FOXB1 JASPAR yes 28327275
chr1 40851742 40851753 FOXC1 JASPAR yes 28327276
chr1 40851742 40851753 FOXB1 JASPAR yes 118277127
chr1 40851742 40851753 FOXC1 JASPAR yes 118277128
chr1 40851742 40851755 EOMES JASPAR yes 28327277
chr1 40851742 40851755 EOMES JASPAR yes 118277129
chr1 40851743 40851754 FOXA1 JASPAR yes 28327278
chr1 40851743 40851754 FOXA1 JASPAR yes 118277130
chr1 40851744 40851755 TBX2 JASPAR yes 28327279
chr1 40851744 40851755 TBX2 JASPAR yes 118277131
chr1 40851764 40851768 TEAD2 TRANSFAC yes 28327280
chr1 40851764 40851768 TEAD2 TRANSFAC yes 118277132
chr1 40851766 40851769 MYB TRANSFAC yes 28327281
chr1 40851766 40851769 MYB TRANSFAC yes 118277133
SNP sites on vista1294[chr1:40851431-40851768]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40851546 rs147472759 A AT
POLR2A
254807
chr1 40851657 rs141043612 C G
HSF1 HSF2 HSF4 POLR2A
254808
chr1 40851702 rs75870385 G A
POLR2A
254809
chr1 40851714 rs115015974 G T
POLR2A
254810
Genes possibly regulated by vista1294[chr1:40851431-40851768]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40766159 40783488 - COL9A2 ENSG00000049089.9 40783488 0.83 1.0 562 32057
chr1 40810522 40888998 + SMAP2 ENSG00000084070.7 40810522 0.91 0.99 563 59091
chr1 40915774 40929390 + ZFP69B ENSG00000187801.10 40915774 0.73 0.82 564 35994
chr1 40942887 40962015 + ZFP69 ENSG00000187815.5 40942887 0.69 0.86 565 8881
Expression level of Genes
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miRNAs possibly regulated by vista1294[chr1:40851431-40851768]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results