EnhancerDB
  1. Home
  2. Enhancers
  3. vista1295[chr1:40853198-40853308]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1295[chr1:40853198-40853308]
Back to top
Tissue distribution of vista1295
Back to top
Transcription factor that possibly regulate vista1295[chr1:40853198-40853308]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40853210 40853228 MAFF JASPAR yes 28327495
chr1 40853210 40853228 MAFF JASPAR yes 118277134
chr1 40853225 40853230 ETS2 TRANSFAC yes 28327496
chr1 40853225 40853230 ETS2 TRANSFAC yes 118277135
chr1 40853228 40853238 MZF1 JASPAR yes 28327497
chr1 40853228 40853238 MZF1 JASPAR yes 118277136
chr1 40853231 40853236 TFAP2A TRANSFAC yes 28327498
chr1 40853231 40853236 TFAP2A TRANSFAC yes 118277137
chr1 40853231 40853237 MZF1 JASPAR yes 28327499
chr1 40853231 40853237 MZF1 JASPAR yes 118277138
chr1 40853255 40853265 MZF1 JASPAR yes 28327500
chr1 40853255 40853265 MZF1 JASPAR yes 118277139
chr1 40853256 40853262 MZF1 JASPAR yes 28327501
chr1 40853256 40853262 MZF1 JASPAR yes 118277140
chr1 40853272 40853277 ETS2 TRANSFAC yes 28327502
chr1 40853272 40853277 ETS2 TRANSFAC yes 118277141
chr1 40853290 40853295 ETS2 TRANSFAC yes 28327503
chr1 40853290 40853295 ETS2 TRANSFAC yes 118277142
chr1 40853298 40853308 HOXA13 JASPAR yes 28327504
chr1 40853298 40853308 HOXB13 JASPAR yes 28327505
chr1 40853298 40853308 HOXA13 JASPAR yes 118277143
chr1 40853298 40853308 HOXB13 JASPAR yes 118277144
chr1 40853299 40853310 CDX2 JASPAR yes 28327506
chr1 40853299 40853310 CDX2 JASPAR yes 118277145
chr1 40853304 40853310 ESR1 TRANSFAC yes 28327507
chr1 40853304 40853310 ESR1 TRANSFAC yes 118277146
chr1 40853306 40853310 ESR1 TRANSFAC yes 28327508
chr1 40853306 40853310 ESR1 TRANSFAC yes 118277147
SNP sites on vista1295[chr1:40853198-40853308]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40853254 rs141820327 G A no 254838
chr1 40853283 rs139205590 A AG no 254839
Genes possibly regulated by vista1295[chr1:40853198-40853308]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40766159 40783488 - COL9A2 ENSG00000049089.9 40783488 0.83 1.0 562 30290
chr1 40810522 40888998 + SMAP2 ENSG00000084070.7 40810522 0.91 0.99 563 57324
chr1 40915774 40929390 + ZFP69B ENSG00000187801.10 40915774 0.73 0.82 564 37534
chr1 40942887 40962015 + ZFP69 ENSG00000187815.5 40942887 0.69 0.86 565 10421
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1295[chr1:40853198-40853308]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results