EnhancerDB
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  3. vista1296[chr1:40860574-40860824]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1296[chr1:40860574-40860824]
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Tissue distribution of vista1296
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Transcription factor that possibly regulate vista1296[chr1:40860574-40860824]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40860591 40860606 RUNX2 JASPAR yes 118277148
chr1 40860618 40860630 TEAD1 JASPAR yes 118277149
chr1 40860622 40860629 SPIB JASPAR yes 118277150
chr1 40860627 40860638 FOSL2 JASPAR yes 118277151
chr1 40860627 40860638 JUNB JASPAR yes 118277152
chr1 40860628 40860639 FOS JASPAR yes 118277153
chr1 40860628 40860639 FOSL1 JASPAR yes 118277154
chr1 40860628 40860639 JUND JASPAR yes 118277155
chr1 40860630 40860637 JUN TRANSFAC yes 118277156
chr1 40860643 40860655 HES5 JASPAR yes 118277157
chr1 40860643 40860655 PKNOX1 JASPAR yes 118277158
chr1 40860643 40860655 PKNOX2 JASPAR yes 118277159
chr1 40860643 40860655 TGIF1 JASPAR yes 118277160
chr1 40860643 40860655 TGIF2 JASPAR yes 118277161
chr1 40860644 40860654 NKX2-3 JASPAR yes 118277162
chr1 40860669 40860683 SPI1 JASPAR yes 118277163
chr1 40860669 40860683 SPIC JASPAR yes 118277164
chr1 40860670 40860683 ELF1 JASPAR yes 118277165
chr1 40860671 40860683 EHF JASPAR yes 118277166
chr1 40860671 40860683 ELF4 JASPAR yes 118277167
chr1 40860671 40860684 ELF3 JASPAR yes 118277168
chr1 40860672 40860683 ELF5 JASPAR yes 118277169
chr1 40860672 40860683 ETV2 JASPAR yes 118277170
chr1 40860673 40860680 SPIB JASPAR yes 118277171
chr1 40860673 40860683 ETV6 JASPAR yes 118277172
chr1 40860673 40860683 GABPA JASPAR yes 118277173
chr1 40860673 40860684 ELK4 JASPAR yes 118277174
chr1 40860673 40860684 FLI1 JASPAR yes 118277175
chr1 40860674 40860682 EHF JASPAR yes 118277176
chr1 40860675 40860682 SPI1 JASPAR yes 118277177
chr1 40860676 40860691 JUND JASPAR yes 118277178
chr1 40860677 40860690 JUN JASPAR yes 118277179
chr1 40860679 40860691 JDP2 JASPAR yes 118277180
chr1 40860679 40860694 JUND JASPAR yes 118277181
chr1 40860706 40860727 ZNF263 JASPAR yes 118277182
chr1 40860759 40860766 NKX3-1 JASPAR yes 118277183
chr1 40860767 40860781 RXRG JASPAR yes 118277184
chr1 40860776 40860796 RREB1 JASPAR yes 118277185
chr1 40860779 40860784 MYC TRANSFAC yes 118277186
chr1 40860784 40860798 GLIS2 JASPAR yes 118277187
chr1 40860784 40860798 GLIS3 JASPAR yes 118277188
chr1 40860787 40860792 SP1 TRANSFAC yes 118277189
chr1 40860788 40860798 ZNF740 JASPAR yes 118277190
chr1 40860791 40860809 ESR2 JASPAR yes 118277191
chr1 40860794 40860798 H4TF2 TRANSFAC yes 118277192
chr1 40860800 40860811 NFE2L2 JASPAR yes 118277193
chr1 40860809 40860823 GLIS3 JASPAR yes 118277194
SNP sites on vista1296[chr1:40860574-40860824]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40860647 rs115279065 C T
HES5 NKX2-3 PKNOX1 PKNOX2 TGIF1 TGIF2
254907
chr1 40860721 rs542084591 A G
ZNF263
254908
chr1 40860735 rs559484017 C A no 254909
chr1 40860754 rs559535609 T C no 254910
Genes possibly regulated by vista1296[chr1:40860574-40860824]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40766159 40783488 - COL9A2 ENSG00000049089.9 40783488 0.83 1.0 562 22914
chr1 40810522 40888998 + SMAP2 ENSG00000084070.7 40810522 0.91 0.99 563 49948
chr1 40915774 40929390 + ZFP69B ENSG00000187801.10 40915774 0.73 0.82 564 45050
chr1 40942887 40962015 + ZFP69 ENSG00000187815.5 40942887 0.69 0.86 565 17937
Expression level of Genes
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miRNAs possibly regulated by vista1296[chr1:40860574-40860824]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results