EnhancerDB
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  3. vista1299[chr1:41005233-41005440]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1299[chr1:41005233-41005440]
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Tissue distribution of vista1299
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Transcription factor that possibly regulate vista1299[chr1:41005233-41005440]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41005242 41005248 JUN TRANSFAC yes 118277275
chr1 41005246 41005249 MYB TRANSFAC yes 118277276
chr1 41005253 41005274 IRF1 JASPAR yes 118277277
chr1 41005255 41005270 STAT2 JASPAR yes 118277278
chr1 41005256 41005270 STAT1 JASPAR yes 118277279
chr1 41005257 41005269 IRF1 JASPAR yes 118277280
chr1 41005257 41005271 IRF7 JASPAR yes 118277281
chr1 41005257 41005271 IRF8 JASPAR yes 118277282
chr1 41005257 41005272 IRF9 JASPAR yes 118277283
chr1 41005277 41005286 NFIX JASPAR yes 118277284
chr1 41005277 41005287 NFIA JASPAR yes 118277285
chr1 41005279 41005285 NFIC JASPAR yes 118277286
chr1 41005283 41005299 SOX8 JASPAR yes 118277287
chr1 41005289 41005293 ESR1 TRANSFAC yes 118277288
chr1 41005311 41005314 MYB TRANSFAC yes 118277289
chr1 41005314 41005318 NFE TRANSFAC yes 118277290
chr1 41005334 41005345 NFE2L2 JASPAR yes 118277291
chr1 41005336 41005340 NFE TRANSFAC yes 118277292
chr1 41005338 41005348 POU6F2 JASPAR yes 118277293
chr1 41005342 41005346 YY1 TRANSFAC yes 118277294
chr1 41005343 41005361 IRF2 JASPAR yes 118277295
chr1 41005344 41005365 IRF1 JASPAR yes 118277296
chr1 41005346 41005361 STAT2 JASPAR yes 118277297
chr1 41005347 41005361 STAT1 JASPAR yes 118277298
chr1 41005348 41005360 IRF1 JASPAR yes 118277299
chr1 41005348 41005363 IRF9 JASPAR yes 118277300
chr1 41005352 41005365 POU2F2 JASPAR yes 118277301
chr1 41005353 41005365 POU3F1 JASPAR yes 118277302
chr1 41005353 41005365 POU3F2 JASPAR yes 118277303
chr1 41005354 41005366 POU2F1 JASPAR yes 118277304
chr1 41005355 41005362 POU2F1 TRANSFAC yes 118277305
chr1 41005355 41005362 POU2F2C TRANSFAC yes 118277306
chr1 41005355 41005362 POU2F2 TRANSFAC yes 118277307
chr1 41005355 41005363 POU2F1 TRANSFAC yes 118277308
chr1 41005355 41005364 POU3F4 JASPAR yes 118277309
chr1 41005355 41005364 POU5F1B JASPAR yes 118277310
chr1 41005360 41005364 YY1 TRANSFAC yes 118277311
chr1 41005365 41005373 HOXA5 JASPAR yes 118277312
chr1 41005366 41005376 EMX1 JASPAR yes 118277313
chr1 41005366 41005376 HOXB3 JASPAR yes 118277314
chr1 41005368 41005379 FOSL2 JASPAR yes 118277315
chr1 41005368 41005379 JUNB JASPAR yes 118277316
chr1 41005369 41005380 FOS JASPAR yes 118277317
chr1 41005369 41005380 FOSL1 JASPAR yes 118277318
chr1 41005369 41005380 JUND JASPAR yes 118277319
chr1 41005370 41005379 JDP2 JASPAR yes 118277320
chr1 41005372 41005387 HNF1A JASPAR yes 118277321
chr1 41005373 41005386 HNF1B JASPAR yes 118277322
chr1 41005373 41005387 POU4F1 JASPAR yes 118277323
chr1 41005373 41005389 POU4F2 JASPAR yes 118277324
chr1 41005373 41005389 POU4F3 JASPAR yes 118277325
chr1 41005374 41005386 HNF1B JASPAR yes 118277326
chr1 41005376 41005386 LHX6 JASPAR yes 118277327
chr1 41005376 41005386 MNX1 JASPAR yes 118277328
chr1 41005376 41005386 POU6F1 JASPAR yes 118277329
chr1 41005377 41005385 LMX1A JASPAR yes 118277330
chr1 41005377 41005385 LMX1B JASPAR yes 118277331
chr1 41005377 41005385 NKX6-1 JASPAR yes 118277332
chr1 41005377 41005385 NKX6-2 JASPAR yes 118277333
chr1 41005377 41005385 VAX1 JASPAR yes 118277334
chr1 41005377 41005385 VAX2 JASPAR yes 118277335
chr1 41005377 41005385 VSX1 JASPAR yes 118277336
chr1 41005377 41005385 VSX2 JASPAR yes 118277337
chr1 41005378 41005388 PAX7 JASPAR yes 118277338
chr1 41005380 41005394 ONECUT2 JASPAR yes 118277339
chr1 41005380 41005394 ONECUT3 JASPAR yes 118277340
chr1 41005394 41005415 IRF1 JASPAR yes 118277341
chr1 41005396 41005411 FOXP1 JASPAR yes 118277342
chr1 41005396 41005417 IRF1 JASPAR yes 118277343
chr1 41005400 41005421 IRF1 JASPAR yes 118277344
chr1 41005401 41005416 FOXP1 JASPAR yes 118277345
chr1 41005401 41005422 IRF1 JASPAR yes 118277346
chr1 41005403 41005418 FOXP1 JASPAR yes 118277347
chr1 41005406 41005427 IRF1 JASPAR yes 118277348
chr1 41005407 41005422 FOXP1 JASPAR yes 118277349
chr1 41005408 41005420 FOXC2 JASPAR yes 118277350
chr1 41005410 41005414 YY1 TRANSFAC yes 118277351
chr1 41005410 41005431 IRF1 JASPAR yes 118277352
chr1 41005412 41005427 FOXP1 JASPAR yes 118277353
chr1 41005412 41005433 ZNF263 JASPAR yes 118277354
chr1 41005423 41005437 PAX6 JASPAR yes 118277355
SNP sites on vista1299[chr1:41005233-41005440]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41005239 rs564332608 G A no 255270
chr1 41005412 rs11456587 A AT
FOXC2 FOXP1 IRF1 YY1 ZNF263
255271
Genes possibly regulated by vista1299[chr1:41005233-41005440]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40915774 40929390 + ZFP69B ENSG00000187801.10 40915774 0.73 0.82 564 10541
chr1 40942887 40962015 + ZFP69 ENSG00000187815.5 40942887 0.69 0.86 565 37654
chr1 40974413 40982228 + EXO5 ENSG00000164002.7 40974413 0.66 0.86 566 69180
chr1 40997233 41013841 + ZNF684 ENSG00000117010.11 40997233 0.78 0.99 567 92000
Expression level of Genes
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miRNAs possibly regulated by vista1299[chr1:41005233-41005440]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results