EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id	More
chr1	41120140	41120146	SOX10	JASPAR	yes		118277555
chr1	41120150	41120155	ATF1	TRANSFAC	yes		118277556
chr1	41120156	41120176	RREB1	JASPAR	yes		118277557
chr1	41120170	41120190	RREB1	JASPAR	yes		118277558
chr1	41120173	41120188	RUNX2	JASPAR	yes		118277559
chr1	41120193	41120199	ZNF354C	JASPAR	yes		118277560
chr1	41120214	41120225	FOXA1	JASPAR	yes		118277561
chr1	41120236	41120242	HiNF-A	TRANSFAC	yes		118277562
chr1	41120238	41120246	TBX5	JASPAR	yes		118277563
chr1	41120258	41120269	USF2	JASPAR	yes		118277564
chr1	41120294	41120314	RREB1	JASPAR	yes		118277565
chr1	41120303	41120323	RREB1	JASPAR	yes		118277566
chr1	41120309	41120329	RREB1	JASPAR	yes		118277567
chr1	41120311	41120331	RREB1	JASPAR	yes		118277568
chr1	41120320	41120330	SP1	JASPAR	yes		118277569

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id	More
chr1	41120345	rs181029821	G	A,T	no	255683
chr1	41120348	rs144311727	C	T	no	255684

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr1	41086351	41131329	-	RIMS3	ENSG00000117016.5	41131329	0.77	0.99	568	89026
chr1	41157320	41237275	+	NFYC	ENSG00000066136.15	41157320	0.72	1.0	569	63035

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results