EnhancerDB
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  3. vista1306[chr1:41178788-41178979]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1306[chr1:41178788-41178979]
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Tissue distribution of vista1306
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Transcription factor that possibly regulate vista1306[chr1:41178788-41178979]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41178829 41178838 HIC2 JASPAR yes 118277615
chr1 41178833 41178851 MAFF JASPAR yes 118277616
chr1 41178840 41178855 MEF2A JASPAR yes 118277617
chr1 41178841 41178856 MEF2C JASPAR yes 118277618
chr1 41178842 41178854 MEF2A JASPAR yes 118277619
chr1 41178842 41178854 MEF2B JASPAR yes 118277620
chr1 41178842 41178854 MEF2D JASPAR yes 118277621
chr1 41178843 41178853 MEF2A JASPAR yes 118277622
chr1 41178844 41178848 YY1 TRANSFAC yes 118277623
chr1 41178853 41178864 ELF5 JASPAR yes 118277624
chr1 41178853 41178866 ELF1 JASPAR yes 118277625
chr1 41178853 41178867 SPI1 JASPAR yes 118277626
chr1 41178853 41178867 SPIC JASPAR yes 118277627
chr1 41178854 41178861 SPI1 JASPAR yes 118277628
chr1 41178854 41178862 FEV JASPAR yes 118277629
chr1 41178856 41178861 ETS2 TRANSFAC yes 118277630
chr1 41178863 41178875 E2F8 JASPAR yes 118277631
chr1 41178864 41178879 TFAP2C JASPAR yes 118277632
chr1 41178865 41178875 ZNF740 JASPAR yes 118277633
chr1 41178866 41178879 TFAP2A JASPAR yes 118277634
chr1 41178866 41178879 TFAP2B JASPAR yes 118277635
chr1 41178866 41178879 TFAP2C JASPAR yes 118277636
chr1 41178867 41178878 EBF1 JASPAR yes 118277637
chr1 41178874 41178884 SP1 JASPAR yes 118277638
chr1 41178876 41178881 SP1 TRANSFAC yes 118277639
chr1 41178884 41178901 ZNF410 JASPAR yes 118277640
chr1 41178887 41178891 YY1 TRANSFAC yes 118277641
chr1 41178901 41178912 FLI1 JASPAR yes 118277642
chr1 41178902 41178907 H4TF1 TRANSFAC yes 118277643
chr1 41178902 41178912 ERF JASPAR yes 118277644
chr1 41178902 41178912 ERG JASPAR yes 118277645
chr1 41178902 41178912 ETS1 JASPAR yes 118277646
chr1 41178902 41178912 FLI1 JASPAR yes 118277647
chr1 41178902 41178913 ETV2 JASPAR yes 118277648
chr1 41178903 41178911 FEV JASPAR yes 118277649
chr1 41178908 41178912 NFE TRANSFAC yes 118277650
chr1 41178921 41178932 ELK4 JASPAR yes 118277651
chr1 41178921 41178932 FLI1 JASPAR yes 118277652
chr1 41178922 41178932 ETV6 JASPAR yes 118277653
chr1 41178922 41178932 GABPA JASPAR yes 118277654
chr1 41178922 41178935 ELF1 JASPAR yes 118277655
chr1 41178923 41178930 SPI1 JASPAR yes 118277656
chr1 41178923 41178931 EHF JASPAR yes 118277657
chr1 41178925 41178932 SPIB JASPAR yes 118277658
chr1 41178939 41178943 ESR1 TRANSFAC yes 118277659
chr1 41178959 41178973 GATA2 JASPAR yes 118277660
chr1 41178965 41178969 NFE TRANSFAC yes 118277661
chr1 41178965 41178970 GATA1 TRANSFAC yes 118277662
chr1 41178965 41178971 GATA3 JASPAR yes 118277663
SNP sites on vista1306[chr1:41178788-41178979]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41178855 rs475268 A G
ELF1 ELF5 FEV MEF2A MEF2C SPI1 SPIC
256070
chr1 41178916 rs114591361 A G no 256071
Genes possibly regulated by vista1306[chr1:41178788-41178979]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41086351 41131329 - RIMS3 ENSG00000117016.5 41131329 0.77 0.99 568 52541
chr1 41157320 41237275 + NFYC ENSG00000066136.15 41157320 0.72 1.0 569 78532
chr1 41249684 41306124 + KCNQ4 ENSG00000117013.10 41249684 0.88 1.0 570 29295
Expression level of Genes
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miRNAs possibly regulated by vista1306[chr1:41178788-41178979]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results