EnhancerDB
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  3. vista1307[chr1:41343431-41343839]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1307[chr1:41343431-41343839]
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Tissue distribution of vista1307
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Transcription factor that possibly regulate vista1307[chr1:41343431-41343839]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41343436 41343447 STAT1 JASPAR yes 28349226
chr1 41343436 41343447 STAT3 JASPAR yes 28349227
chr1 41343436 41343447 STAT1 JASPAR yes 118277664
chr1 41343436 41343447 STAT3 JASPAR yes 118277665
chr1 41343437 41343456 CTCF JASPAR yes 28349228
chr1 41343437 41343456 CTCF JASPAR yes 118277666
chr1 41343460 41343473 JUN JASPAR yes 28349229
chr1 41343460 41343473 JUN JASPAR yes 118277667
chr1 41343484 41343497 NFKB2 JASPAR yes 28349230
chr1 41343484 41343497 NFKB2 JASPAR yes 118277668
chr1 41343491 41343500 SP1 TRANSFAC yes 28349231
chr1 41343491 41343500 SP1 TRANSFAC yes 118277669
chr1 41343492 41343498 SP1 TRANSFAC yes 28349232
chr1 41343492 41343498 SP1 TRANSFAC yes 118277670
chr1 41343492 41343502 SP1 JASPAR yes 28349233
chr1 41343492 41343502 SP1 JASPAR yes 118277671
chr1 41343493 41343500 SP1 TRANSFAC yes 28349234
chr1 41343493 41343500 SP1 TRANSFAC yes 118277672
chr1 41343494 41343499 SP1 TRANSFAC yes 28349235
chr1 41343494 41343499 SP1 TRANSFAC yes 118277673
chr1 41343494 41343500 SP1 TRANSFAC yes 28349236
chr1 41343494 41343500 SP1 TRANSFAC yes 118277674
chr1 41343494 41343501 SP1 TRANSFAC yes 28349237
chr1 41343494 41343501 SP1 TRANSFAC yes 118277675
chr1 41343513 41343523 NFKB1 JASPAR yes 28349238
chr1 41343513 41343523 NFKB1 JASPAR yes 118277676
chr1 41343525 41343530 TFAP2A TRANSFAC yes 28349239
chr1 41343525 41343530 TFAP2A TRANSFAC yes 118277677
chr1 41343525 41343531 MZF1 JASPAR yes 28349240
chr1 41343525 41343531 MZF1 JASPAR yes 118277678
chr1 41343532 41343543 USF1 JASPAR yes 28349241
chr1 41343532 41343543 USF1 JASPAR yes 118277679
chr1 41343533 41343543 TFEB JASPAR yes 28349242
chr1 41343533 41343543 TFEC JASPAR yes 28349243
chr1 41343533 41343543 TFEB JASPAR yes 118277680
chr1 41343533 41343543 TFEC JASPAR yes 118277681
chr1 41343533 41343544 USF2 JASPAR yes 28349244
chr1 41343533 41343544 USF2 JASPAR yes 118277682
chr1 41343550 41343559 HIC2 JASPAR yes 28349245
chr1 41343550 41343559 HIC2 JASPAR yes 118277683
chr1 41343565 41343569 NFE TRANSFAC yes 28349246
chr1 41343565 41343569 NFE TRANSFAC yes 118277684
chr1 41343571 41343583 INSM1 JASPAR yes 28349247
chr1 41343571 41343583 INSM1 JASPAR yes 118277685
chr1 41343576 41343581 SP1 TRANSFAC yes 28349248
chr1 41343576 41343581 SP1 TRANSFAC yes 118277686
chr1 41343576 41343591 RUNX2 JASPAR yes 28349249
chr1 41343576 41343591 RUNX2 JASPAR yes 118277687
chr1 41343583 41343593 SP1 JASPAR yes 28349250
chr1 41343583 41343593 SP1 JASPAR yes 118277688
chr1 41343585 41343597 INSM1 JASPAR yes 28349251
chr1 41343585 41343597 INSM1 JASPAR yes 118277689
chr1 41343586 41343596 MZF1 JASPAR yes 28349252
chr1 41343586 41343596 MZF1 JASPAR yes 118277690
chr1 41343605 41343616 ELK4 JASPAR yes 28349253
chr1 41343605 41343616 FLI1 JASPAR yes 28349254
chr1 41343605 41343616 ELK4 JASPAR yes 118277691
chr1 41343605 41343616 FLI1 JASPAR yes 118277692
chr1 41343606 41343616 ERF JASPAR yes 28349255
chr1 41343606 41343616 ERG JASPAR yes 28349256
chr1 41343606 41343616 ETS1 JASPAR yes 28349257
chr1 41343606 41343616 FLI1 JASPAR yes 28349258
chr1 41343606 41343616 GABPA JASPAR yes 28349259
chr1 41343606 41343616 ERF JASPAR yes 118277693
chr1 41343606 41343616 ERG JASPAR yes 118277694
chr1 41343606 41343616 ETS1 JASPAR yes 118277695
chr1 41343606 41343616 FLI1 JASPAR yes 118277696
chr1 41343606 41343616 GABPA JASPAR yes 118277697
chr1 41343606 41343617 ETV2 JASPAR yes 28349260
chr1 41343606 41343617 ETV2 JASPAR yes 118277698
chr1 41343606 41343619 ELF1 JASPAR yes 28349261
chr1 41343606 41343619 ELF1 JASPAR yes 118277699
chr1 41343651 41343666 NR2C2 JASPAR yes 28349262
chr1 41343651 41343666 NR2C2 JASPAR yes 118277700
chr1 41343652 41343662 SP1 JASPAR yes 28349263
chr1 41343652 41343662 SP1 JASPAR yes 118277701
chr1 41343653 41343663 SP1 JASPAR yes 28349264
chr1 41343653 41343663 SP1 JASPAR yes 118277702
chr1 41343654 41343658 LFA1 TRANSFAC yes 28349265
chr1 41343654 41343658 LFA1 TRANSFAC yes 118277703
chr1 41343671 41343682 FLI1 JASPAR yes 28349266
chr1 41343671 41343682 FLI1 JASPAR yes 118277704
chr1 41343672 41343680 EHF JASPAR yes 28349267
chr1 41343672 41343680 EHF JASPAR yes 118277705
chr1 41343679 41343683 LFA1 TRANSFAC yes 28349268
chr1 41343679 41343683 LFA1 TRANSFAC yes 118277706
chr1 41343679 41343691 NHLH1 JASPAR yes 28349269
chr1 41343679 41343691 NHLH1 JASPAR yes 118277707
chr1 41343680 41343690 NHLH1 JASPAR yes 28349270
chr1 41343680 41343690 NHLH1 JASPAR yes 118277708
chr1 41343687 41343697 NFKB1 JASPAR yes 28349271
chr1 41343687 41343697 RELA JASPAR yes 28349272
chr1 41343687 41343697 REL JASPAR yes 28349273
chr1 41343687 41343697 NFKB1 JASPAR yes 118277709
chr1 41343687 41343697 RELA JASPAR yes 118277710
chr1 41343687 41343697 REL JASPAR yes 118277711
chr1 41343687 41343698 NFKB1 JASPAR yes 28349274
chr1 41343687 41343698 NFKB1 JASPAR yes 118277712
chr1 41343693 41343700 SPIB JASPAR yes 28349275
chr1 41343693 41343700 SPIB JASPAR yes 118277713
chr1 41343724 41343738 TLX1 JASPAR yes 28349276
chr1 41343724 41343738 TLX1 JASPAR yes 118277714
chr1 41343742 41343747 ETS2 TRANSFAC yes 28349277
chr1 41343742 41343747 ETS2 TRANSFAC yes 118277715
chr1 41343745 41343750 ETS2 TRANSFAC yes 28349278
chr1 41343745 41343750 ETS2 TRANSFAC yes 118277716
chr1 41343745 41343755 TEAD4 JASPAR yes 28349279
chr1 41343745 41343755 TEAD4 JASPAR yes 118277717
chr1 41343746 41343757 NFKB1 JASPAR yes 28349280
chr1 41343746 41343757 NFKB1 JASPAR yes 118277718
chr1 41343747 41343757 NFKB1 JASPAR yes 28349281
chr1 41343747 41343757 RELA JASPAR yes 28349282
chr1 41343747 41343757 REL JASPAR yes 28349283
chr1 41343747 41343757 NFKB1 JASPAR yes 118277719
chr1 41343747 41343757 RELA JASPAR yes 118277720
chr1 41343747 41343757 REL JASPAR yes 118277721
chr1 41343761 41343765 NFE TRANSFAC yes 28349284
chr1 41343761 41343765 NFE TRANSFAC yes 118277722
chr1 41343764 41343785 IRF1 JASPAR yes 28349285
chr1 41343764 41343785 IRF1 JASPAR yes 118277723
chr1 41343770 41343785 FOXP1 JASPAR yes 28349286
chr1 41343770 41343785 FOXP1 JASPAR yes 118277724
chr1 41343770 41343791 IRF1 JASPAR yes 28349287
chr1 41343770 41343791 IRF1 JASPAR yes 118277725
chr1 41343771 41343782 FOXP2 JASPAR yes 28349288
chr1 41343771 41343782 FOXP2 JASPAR yes 118277726
chr1 41343772 41343787 PRDM1 JASPAR yes 28349289
chr1 41343772 41343787 PRDM1 JASPAR yes 118277727
chr1 41343773 41343784 FOXA1 JASPAR yes 28349290
chr1 41343773 41343784 FOXA1 JASPAR yes 118277728
chr1 41343776 41343797 IRF1 JASPAR yes 28349291
chr1 41343776 41343797 IRF1 JASPAR yes 118277729
chr1 41343777 41343798 IRF1 JASPAR yes 28349292
chr1 41343777 41343798 IRF1 JASPAR yes 118277730
chr1 41343779 41343794 FOXP1 JASPAR yes 28349293
chr1 41343779 41343794 FOXP1 JASPAR yes 118277731
chr1 41343786 41343790 YY1 TRANSFAC yes 28349294
chr1 41343786 41343790 YY1 TRANSFAC yes 118277732
chr1 41343789 41343801 FOXC2 JASPAR yes 28349295
chr1 41343789 41343801 FOXC2 JASPAR yes 118277733
chr1 41343790 41343801 FOXC1 JASPAR yes 28349296
chr1 41343790 41343801 FOXC1 JASPAR yes 118277734
chr1 41343791 41343795 YY1 TRANSFAC yes 28349297
chr1 41343791 41343795 YY1 TRANSFAC yes 118277735
chr1 41343817 41343821 NFE TRANSFAC yes 28349298
chr1 41343817 41343821 NFE TRANSFAC yes 118277736
SNP sites on vista1307[chr1:41343431-41343839]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41343496 rs72951029 C T
NFKB2 SP1
257381
chr1 41343608 rs913389 G A
ELF1 ELK4 ERF ERG ETS1 ETV2 FLI1 GABPA
257382
chr1 41343763 rs74837934 T C
NFE
257383
Genes possibly regulated by vista1307[chr1:41343431-41343839]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41249684 41306124 + KCNQ4 ENSG00000117013.10 41249684 0.88 1.0 570 6253
chr1 41326729 41328018 - CITED4 ENSG00000179862.5 41328018 0.84 0.99 571 84587
Expression level of Genes
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miRNAs possibly regulated by vista1307[chr1:41343431-41343839]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results