EnhancerDB
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  3. vista1311[chr1:41501440-41501773]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1311[chr1:41501440-41501773]
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Tissue distribution of vista1311
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Transcription factor that possibly regulate vista1311[chr1:41501440-41501773]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41501466 41501481 FOXP1 JASPAR yes 118277875
chr1 41501472 41501484 E2F8 JASPAR yes 118277876
chr1 41501485 41501491 MZF1 JASPAR yes 118277877
chr1 41501502 41501513 TBX20 JASPAR yes 118277878
chr1 41501504 41501514 MZF1 JASPAR yes 118277879
chr1 41501507 41501513 SP1 TRANSFAC yes 118277880
chr1 41501511 41501526 RUNX2 JASPAR yes 118277881
chr1 41501543 41501549 ZNF354C JASPAR yes 118277882
chr1 41501547 41501557 EN2 JASPAR yes 118277883
chr1 41501547 41501557 ESX1 JASPAR yes 118277884
chr1 41501547 41501557 GBX1 JASPAR yes 118277885
chr1 41501547 41501557 GBX2 JASPAR yes 118277886
chr1 41501547 41501557 HESX1 JASPAR yes 118277887
chr1 41501547 41501557 HOXA2 JASPAR yes 118277888
chr1 41501547 41501557 LBX2 JASPAR yes 118277889
chr1 41501547 41501557 LHX2 JASPAR yes 118277890
chr1 41501548 41501552 H1TF2 TRANSFAC yes 118277891
chr1 41501548 41501552 NFE TRANSFAC yes 118277892
chr1 41501548 41501552 SRF TRANSFAC yes 118277893
chr1 41501548 41501556 BSX JASPAR yes 118277894
chr1 41501548 41501556 DLX6 JASPAR yes 118277895
chr1 41501548 41501556 MSX1 JASPAR yes 118277896
chr1 41501548 41501556 MSX2 JASPAR yes 118277897
chr1 41501551 41501563 HNF1B JASPAR yes 118277898
chr1 41501557 41501565 HOXA5 JASPAR yes 118277899
chr1 41501572 41501576 H1TF2 TRANSFAC yes 118277900
chr1 41501572 41501576 NFE TRANSFAC yes 118277901
chr1 41501572 41501576 SRF TRANSFAC yes 118277902
chr1 41501572 41501578 NFYC TRANSFAC yes 118277903
chr1 41501607 41501613 LEF1 TRANSFAC yes 118277904
chr1 41501607 41501613 SOX10 JASPAR yes 118277905
chr1 41501632 41501653 REST JASPAR yes 118277906
chr1 41501633 41501652 REST JASPAR yes 118277907
chr1 41501644 41501659 RFX5 JASPAR yes 118277908
chr1 41501666 41501687 IRF1 JASPAR yes 118277909
chr1 41501671 41501681 TBX21 JASPAR yes 118277910
chr1 41501674 41501688 TCF7L2 JASPAR yes 118277911
chr1 41501676 41501688 IRF1 JASPAR yes 118277912
chr1 41501681 41501694 HSF1 JASPAR yes 118277913
chr1 41501702 41501714 POU2F1 JASPAR yes 118277914
chr1 41501712 41501717 ETS2 TRANSFAC yes 118277915
chr1 41501727 41501732 SP1 TRANSFAC yes 118277916
chr1 41501733 41501754 ZNF263 JASPAR yes 118277917
chr1 41501744 41501754 TBR1 JASPAR yes 118277918
chr1 41501745 41501755 TBX21 JASPAR yes 118277919
chr1 41501760 41501766 LEF1 TRANSFAC yes 118277920
chr1 41501760 41501766 SOX10 JASPAR yes 118277921
SNP sites on vista1311[chr1:41501440-41501773]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41501510 rs181223388 C G
MZF1 SP1 TBX20
258981
chr1 41501511 rs57454247 CT C
MZF1 RUNX2 SP1 TBX20
258982
chr1 41501576 rs184880410 A G
H1TF2 NFE NFYC SRF
258983
chr1 41501625 rs569247853 C T no 258984
Genes possibly regulated by vista1311[chr1:41501440-41501773]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41445007 41478235 + CTPS1 ENSG00000171793.9 41445007 0.79 0.99 572 43567
chr1 41481269 41488909 - SLFNL1 ENSG00000171790.11 41488909 0.83 1.0 573 87469
Expression level of Genes
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miRNAs possibly regulated by vista1311[chr1:41501440-41501773]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results