EnhancerDB
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  3. vista1314[chr1:41622480-41622650]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1314[chr1:41622480-41622650]
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Tissue distribution of vista1314
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Transcription factor that possibly regulate vista1314[chr1:41622480-41622650]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41622471 41622489 MAFF JASPAR yes 28366835
chr1 41622471 41622489 MAFF JASPAR yes 118277970
chr1 41622473 41622488 MAFK JASPAR yes 28366836
chr1 41622473 41622488 MAFK JASPAR yes 118277971
chr1 41622485 41622490 GATA2 JASPAR yes 28366837
chr1 41622485 41622490 GATA2 JASPAR yes 118277972
chr1 41622495 41622513 NR3C1 JASPAR yes 28366838
chr1 41622495 41622513 NR3C1 JASPAR yes 118277973
chr1 41622496 41622511 AR JASPAR yes 28366839
chr1 41622496 41622511 AR JASPAR yes 118277974
chr1 41622501 41622515 ONECUT3 JASPAR yes 28366840
chr1 41622501 41622515 ONECUT3 JASPAR yes 118277975
chr1 41622521 41622531 SP1 JASPAR yes 28366841
chr1 41622521 41622531 SP1 JASPAR yes 118277976
chr1 41622526 41622537 NFKB1 JASPAR yes 28366842
chr1 41622526 41622537 NFKB1 JASPAR yes 118277977
chr1 41622574 41622587 ELF1 JASPAR yes 28366843
chr1 41622574 41622587 ELF1 JASPAR yes 118277978
chr1 41622614 41622618 TEAD2 TRANSFAC yes 28366844
chr1 41622614 41622618 TEAD2 TRANSFAC yes 118277979
chr1 41622619 41622640 IRF1 JASPAR yes 28366845
chr1 41622619 41622640 IRF1 JASPAR yes 118277980
chr1 41622621 41622636 PRDM1 JASPAR yes 28366846
chr1 41622621 41622636 STAT2 JASPAR yes 28366847
chr1 41622621 41622636 PRDM1 JASPAR yes 118277981
chr1 41622621 41622636 STAT2 JASPAR yes 118277982
chr1 41622622 41622643 IRF1 JASPAR yes 28366848
chr1 41622622 41622643 IRF1 JASPAR yes 118277983
chr1 41622623 41622644 IRF1 JASPAR yes 28366849
chr1 41622623 41622644 IRF1 JASPAR yes 118277984
chr1 41622624 41622639 FOXP1 JASPAR yes 28366850
chr1 41622624 41622639 FOXP1 JASPAR yes 118277985
chr1 41622624 41622645 IRF1 JASPAR yes 28366851
chr1 41622624 41622645 IRF1 JASPAR yes 118277986
chr1 41622625 41622640 FOXP1 JASPAR yes 28366852
chr1 41622625 41622640 FOXP1 JASPAR yes 118277987
chr1 41622625 41622646 IRF1 JASPAR yes 28366853
chr1 41622625 41622646 IRF1 JASPAR yes 118277988
chr1 41622626 41622641 FOXP1 JASPAR yes 28366854
chr1 41622626 41622641 FOXP1 JASPAR yes 118277989
chr1 41622626 41622647 IRF1 JASPAR yes 28366855
chr1 41622626 41622647 IRF1 JASPAR yes 118277990
chr1 41622627 41622642 FOXP1 JASPAR yes 28366856
chr1 41622627 41622642 FOXP1 JASPAR yes 118277991
chr1 41622628 41622643 FOXP1 JASPAR yes 28366857
chr1 41622628 41622643 FOXP1 JASPAR yes 118277992
chr1 41622629 41622644 FOXP1 JASPAR yes 28366858
chr1 41622629 41622644 FOXP1 JASPAR yes 118277993
chr1 41622630 41622645 FOXP1 JASPAR yes 28366859
chr1 41622630 41622645 FOXP1 JASPAR yes 118277994
chr1 41622631 41622646 FOXP1 JASPAR yes 28366860
chr1 41622631 41622646 FOXP1 JASPAR yes 118277995
chr1 41622632 41622647 FOXP1 JASPAR yes 28366861
chr1 41622632 41622647 FOXP1 JASPAR yes 118277996
chr1 41622633 41622648 FOXP1 JASPAR yes 28366862
chr1 41622633 41622648 FOXP1 JASPAR yes 118277997
chr1 41622634 41622649 FOXP1 JASPAR yes 28366863
chr1 41622634 41622649 FOXP1 JASPAR yes 118277998
chr1 41622649 41622655 SOX10 JASPAR yes 28366864
chr1 41622649 41622655 SOX10 JASPAR yes 118277999
SNP sites on vista1314[chr1:41622480-41622650]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41622593 rs213737 C A no 259342
chr1 41622610 rs114943326 A G no 259343
chr1 41622625 rs67034009 CT C
FOXP1 IRF1 PRDM1 STAT2
259344
Genes possibly regulated by vista1314[chr1:41622480-41622650]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41492872 41707826 - SCMH1 ENSG00000010803.12 41707826 0.65 1.0 574 14824
Expression level of Genes
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miRNAs possibly regulated by vista1314[chr1:41622480-41622650]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results