EnhancerDB
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  3. vista1316[chr1:41650800-41651168]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1316[chr1:41650800-41651168]
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Tissue distribution of vista1316
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Transcription factor that possibly regulate vista1316[chr1:41650800-41651168]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41650803 41650818 LEF1 JASPAR yes 28369672
chr1 41650803 41650818 LEF1 JASPAR yes 118278098
chr1 41650804 41650818 TCF7L2 JASPAR yes 28369673
chr1 41650804 41650818 TCF7L2 JASPAR yes 118278099
chr1 41650807 41650813 LEF1 TRANSFAC yes 28369674
chr1 41650807 41650813 TCF4 TRANSFAC yes 28369675
chr1 41650807 41650813 LEF1 TRANSFAC yes 118278100
chr1 41650807 41650813 TCF4 TRANSFAC yes 118278101
chr1 41650812 41650823 FOXB1 JASPAR yes 28369676
chr1 41650812 41650823 FOXC1 JASPAR yes 28369677
chr1 41650812 41650823 FOXB1 JASPAR yes 118278102
chr1 41650812 41650823 FOXC1 JASPAR yes 118278103
chr1 41650812 41650824 POU3F1 JASPAR yes 28369678
chr1 41650812 41650824 POU3F2 JASPAR yes 28369679
chr1 41650812 41650824 POU3F1 JASPAR yes 118278104
chr1 41650812 41650824 POU3F2 JASPAR yes 118278105
chr1 41650812 41650825 POU3F3 JASPAR yes 28369680
chr1 41650812 41650825 POU3F3 JASPAR yes 118278106
chr1 41650813 41650817 YY1 TRANSFAC yes 28369681
chr1 41650813 41650817 YY1 TRANSFAC yes 118278107
chr1 41650813 41650823 NFATC3 JASPAR yes 28369682
chr1 41650813 41650823 NFATC3 JASPAR yes 118278108
chr1 41650813 41650825 POU2F1 JASPAR yes 28369683
chr1 41650813 41650825 POU2F1 JASPAR yes 118278109
chr1 41650814 41650823 POU3F4 JASPAR yes 28369684
chr1 41650814 41650823 POU5F1B JASPAR yes 28369685
chr1 41650814 41650823 POU3F4 JASPAR yes 118278110
chr1 41650814 41650823 POU5F1B JASPAR yes 118278111
chr1 41650816 41650831 IRF9 JASPAR yes 28369686
chr1 41650816 41650831 IRF9 JASPAR yes 118278112
chr1 41650817 41650831 IRF8 JASPAR yes 28369687
chr1 41650817 41650831 IRF8 JASPAR yes 118278113
chr1 41650819 41650831 IRF1 JASPAR yes 28369688
chr1 41650819 41650831 IRF1 JASPAR yes 118278114
chr1 41650832 41650836 YY1 TRANSFAC yes 28369689
chr1 41650832 41650836 YY1 TRANSFAC yes 118278115
chr1 41650886 41650897 NFE2L2 JASPAR yes 28369690
chr1 41650886 41650897 NFE2L2 JASPAR yes 118278116
chr1 41650897 41650907 GSC2 JASPAR yes 28369691
chr1 41650897 41650907 GSC2 JASPAR yes 118278117
chr1 41650898 41650906 OTX1 JASPAR yes 28369692
chr1 41650898 41650906 OTX2 JASPAR yes 28369693
chr1 41650898 41650906 OTX1 JASPAR yes 118278118
chr1 41650898 41650906 OTX2 JASPAR yes 118278119
chr1 41650902 41650917 FOXP1 JASPAR yes 28369694
chr1 41650902 41650917 FOXP1 JASPAR yes 118278120
chr1 41650903 41650909 TBP TRANSFAC yes 28369695
chr1 41650903 41650909 TBP TRANSFAC yes 118278121
chr1 41650925 41650931 MYC TRANSFAC yes 28369696
chr1 41650925 41650931 MYC TRANSFAC yes 118278122
chr1 41650946 41650957 NFIL3 JASPAR yes 28369697
chr1 41650946 41650957 NFIL3 JASPAR yes 118278123
chr1 41650947 41650959 DBP JASPAR yes 28369698
chr1 41650947 41650959 HLF JASPAR yes 28369699
chr1 41650947 41650959 TEF JASPAR yes 28369700
chr1 41650947 41650959 DBP JASPAR yes 118278124
chr1 41650947 41650959 HLF JASPAR yes 118278125
chr1 41650947 41650959 TEF JASPAR yes 118278126
chr1 41650954 41650964 TBX21 JASPAR yes 28369701
chr1 41650954 41650964 TBX21 JASPAR yes 118278127
chr1 41650954 41650965 TBX20 JASPAR yes 28369702
chr1 41650954 41650965 TBX2 JASPAR yes 28369703
chr1 41650954 41650965 TBX20 JASPAR yes 118278128
chr1 41650954 41650965 TBX2 JASPAR yes 118278129
chr1 41650954 41650967 EOMES JASPAR yes 28369704
chr1 41650954 41650967 EOMES JASPAR yes 118278130
chr1 41650955 41650963 MGA JASPAR yes 28369705
chr1 41650955 41650963 TBX15 JASPAR yes 28369706
chr1 41650955 41650963 TBX1 JASPAR yes 28369707
chr1 41650955 41650963 TBX4 JASPAR yes 28369708
chr1 41650955 41650963 TBX5 JASPAR yes 28369709
chr1 41650955 41650963 MGA JASPAR yes 118278131
chr1 41650955 41650963 TBX15 JASPAR yes 118278132
chr1 41650955 41650963 TBX1 JASPAR yes 118278133
chr1 41650955 41650963 TBX4 JASPAR yes 118278134
chr1 41650955 41650963 TBX5 JASPAR yes 118278135
chr1 41650955 41650965 TBR1 JASPAR yes 28369710
chr1 41650955 41650965 TBR1 JASPAR yes 118278136
chr1 41650964 41650975 TBX2 JASPAR yes 28369711
chr1 41650964 41650975 TBX2 JASPAR yes 118278137
chr1 41650964 41650977 EOMES JASPAR yes 28369712
chr1 41650964 41650977 EOMES JASPAR yes 118278138
chr1 41650971 41650975 TEAD2 TRANSFAC yes 28369713
chr1 41650971 41650975 TEAD2 TRANSFAC yes 118278139
chr1 41650973 41650976 MYB TRANSFAC yes 28369714
chr1 41650973 41650976 MYB TRANSFAC yes 118278140
chr1 41650997 41651010 SMAD2 JASPAR yes 28369715
chr1 41650997 41651010 SMAD2 JASPAR yes 118278141
chr1 41651001 41651011 SREBF1 JASPAR yes 28369716
chr1 41651001 41651011 SREBF1 JASPAR yes 118278142
chr1 41651002 41651010 MGA JASPAR yes 28369717
chr1 41651002 41651010 MGA JASPAR yes 118278143
chr1 41651023 41651036 ELF1 JASPAR yes 28369718
chr1 41651023 41651036 ELF1 JASPAR yes 118278144
chr1 41651023 41651037 SPI1 JASPAR yes 28369719
chr1 41651023 41651037 SPI1 JASPAR yes 118278145
chr1 41651025 41651031 ETS1 JASPAR yes 28369720
chr1 41651025 41651031 SPI1 JASPAR yes 28369721
chr1 41651025 41651031 ETS1 JASPAR yes 118278146
chr1 41651025 41651031 SPI1 JASPAR yes 118278147
chr1 41651035 41651041 LEF1 TRANSFAC yes 28369722
chr1 41651035 41651041 SOX10 JASPAR yes 28369723
chr1 41651035 41651041 LEF1 TRANSFAC yes 118278148
chr1 41651035 41651041 SOX10 JASPAR yes 118278149
chr1 41651045 41651059 TLX1 JASPAR yes 28369724
chr1 41651045 41651059 TLX1 JASPAR yes 118278150
chr1 41651052 41651064 YY1 JASPAR yes 28369725
chr1 41651052 41651064 YY1 JASPAR yes 118278151
chr1 41651077 41651081 H1TF2 TRANSFAC yes 28369726
chr1 41651077 41651081 NFE TRANSFAC yes 28369727
chr1 41651077 41651081 SRF TRANSFAC yes 28369728
chr1 41651077 41651081 H1TF2 TRANSFAC yes 118278152
chr1 41651077 41651081 NFE TRANSFAC yes 118278153
chr1 41651077 41651081 SRF TRANSFAC yes 118278154
chr1 41651095 41651111 E2F2 JASPAR yes 28369729
chr1 41651095 41651111 E2F2 JASPAR yes 118278155
chr1 41651098 41651112 RORA JASPAR yes 28369730
chr1 41651098 41651112 RORA JASPAR yes 118278156
chr1 41651102 41651116 PLAG1 JASPAR yes 28369731
chr1 41651102 41651116 PLAG1 JASPAR yes 118278157
chr1 41651114 41651120 MZF1 JASPAR yes 28369732
chr1 41651114 41651120 MZF1 JASPAR yes 118278158
chr1 41651129 41651142 ZBTB18 JASPAR yes 28369733
chr1 41651129 41651142 ZBTB18 JASPAR yes 118278159
chr1 41651130 41651142 PKNOX1 JASPAR yes 28369734
chr1 41651130 41651142 TGIF1 JASPAR yes 28369735
chr1 41651130 41651142 PKNOX1 JASPAR yes 118278160
chr1 41651130 41651142 TGIF1 JASPAR yes 118278161
chr1 41651131 41651140 SNAI2 JASPAR yes 28369736
chr1 41651131 41651140 SNAI2 JASPAR yes 118278162
chr1 41651131 41651141 FIGLA JASPAR yes 28369737
chr1 41651131 41651141 ID4 JASPAR yes 28369738
chr1 41651131 41651141 TCF3 JASPAR yes 28369739
chr1 41651131 41651141 TCF4 JASPAR yes 28369740
chr1 41651131 41651141 FIGLA JASPAR yes 118278163
chr1 41651131 41651141 ID4 JASPAR yes 118278164
chr1 41651131 41651141 TCF3 JASPAR yes 118278165
chr1 41651131 41651141 TCF4 JASPAR yes 118278166
chr1 41651133 41651142 ZEB1 JASPAR yes 28369741
chr1 41651133 41651142 ZEB1 JASPAR yes 118278167
chr1 41651133 41651143 TBX21 JASPAR yes 28369742
chr1 41651133 41651143 TBX21 JASPAR yes 118278168
chr1 41651133 41651146 EOMES JASPAR yes 28369743
chr1 41651133 41651146 EOMES JASPAR yes 118278169
chr1 41651134 41651142 MGA JASPAR yes 28369744
chr1 41651134 41651142 TBX15 JASPAR yes 28369745
chr1 41651134 41651142 TBX1 JASPAR yes 28369746
chr1 41651134 41651142 TBX4 JASPAR yes 28369747
chr1 41651134 41651142 TBX5 JASPAR yes 28369748
chr1 41651134 41651142 MGA JASPAR yes 118278170
chr1 41651134 41651142 TBX15 JASPAR yes 118278171
chr1 41651134 41651142 TBX1 JASPAR yes 118278172
chr1 41651134 41651142 TBX4 JASPAR yes 118278173
chr1 41651134 41651142 TBX5 JASPAR yes 118278174
chr1 41651134 41651144 TBR1 JASPAR yes 28369749
chr1 41651134 41651144 TBR1 JASPAR yes 118278175
chr1 41651143 41651164 ZNF263 JASPAR yes 28369750
chr1 41651143 41651164 ZNF263 JASPAR yes 118278176
chr1 41651152 41651166 SPI1 JASPAR yes 28369751
chr1 41651152 41651166 SPI1 JASPAR yes 118278177
chr1 41651158 41651173 FOXP1 JASPAR yes 28369752
chr1 41651158 41651173 FOXP1 JASPAR yes 118278178
SNP sites on vista1316[chr1:41650800-41651168]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41651030 rs74069080 C T
ELF1 ETS1 SPI1
259562
chr1 41651127 rs77768769 G A,T no 259563
chr1 41651166 rs55793302 T C
FOXP1 SPI1
259564
Genes possibly regulated by vista1316[chr1:41650800-41651168]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41492872 41707826 - SCMH1 ENSG00000010803.12 41707826 0.65 1.0 574 43342
Expression level of Genes
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miRNAs possibly regulated by vista1316[chr1:41650800-41651168]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results