EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id	More
chr1	41762096	41762100	YY1	TRANSFAC	yes		118278179
chr1	41762105	41762116	PHOX2A	JASPAR	yes		118278180
chr1	41762105	41762116	PROP1	JASPAR	yes		118278181
chr1	41762109	41762117	LBX1	JASPAR	yes		118278182
chr1	41762116	41762126	GCM2	JASPAR	yes		118278183
chr1	41762131	41762135	YY1	TRANSFAC	yes		118278184
chr1	41762136	41762144	GATA3	JASPAR	yes		118278185
chr1	41762142	41762150	LBX1	JASPAR	yes		118278186
chr1	41762152	41762166	SPI1	JASPAR	yes		118278187
chr1	41762164	41762167	MYB	TRANSFAC	yes		118278188
chr1	41762165	41762181	SOX8	JASPAR	yes		118278189
chr1	41762187	41762191	YY1	TRANSFAC	yes		118278190
chr1	41762190	41762204	RORA	JASPAR	yes		118278191
chr1	41762191	41762201	RORA	JASPAR	yes		118278192
chr1	41762191	41762208	RARA	JASPAR	yes		118278193
chr1	41762191	41762208	RXRA	JASPAR	yes		118278194
chr1	41762200	41762205	GATA2	JASPAR	yes		118278195

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id	More
chr1	41762098	rs528474240	A	AT	YY1	260182
chr1	41762106	rs181988173	T	A	PHOX2A PROP1	260183
chr1	41762156	rs12030420	A	T	SPI1	260184
chr1	41762193	rs561761368	G	A,T	RARA RORA RXRA	260185

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr1	41492872	41707826	-	SCMH1	ENSG00000010803.12	41707826	0.65	1.0	574	45744
chr1	41827594	41849262	+	FOXO6	ENSG00000204060.4	41827594	0.84	1.0	575	34629

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results