EnhancerDB
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  3. vista1320[chr1:41826642-41826952]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1320[chr1:41826642-41826952]
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Tissue distribution of vista1320
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Transcription factor that possibly regulate vista1320[chr1:41826642-41826952]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41826655 41826660 ATF1 TRANSFAC yes 28380842
chr1 41826655 41826660 ATF1 TRANSFAC yes 118278238
chr1 41826666 41826685 CTCF JASPAR yes 28380843
chr1 41826666 41826685 CTCF JASPAR yes 118278239
chr1 41826675 41826684 HiNF-C TRANSFAC yes 28380844
chr1 41826675 41826684 HiNF-C TRANSFAC yes 118278240
chr1 41826675 41826685 SP1 JASPAR yes 28380845
chr1 41826675 41826685 SP1 JASPAR yes 118278241
chr1 41826676 41826682 SP1 TRANSFAC yes 28380846
chr1 41826676 41826682 SP1 TRANSFAC yes 118278242
chr1 41826677 41826682 SP1 TRANSFAC yes 28380847
chr1 41826677 41826682 SP1 TRANSFAC yes 118278243
chr1 41826678 41826683 SP1 TRANSFAC yes 28380848
chr1 41826678 41826683 SP1 TRANSFAC yes 118278244
chr1 41826678 41826684 SP1 TRANSFAC yes 28380849
chr1 41826678 41826684 SP1 TRANSFAC yes 118278245
chr1 41826682 41826686 LFA1 TRANSFAC yes 28380850
chr1 41826682 41826686 LFA1 TRANSFAC yes 118278246
chr1 41826702 41826712 SP1 JASPAR yes 28380851
chr1 41826702 41826712 SP1 JASPAR yes 118278247
chr1 41826704 41826709 SP1 TRANSFAC yes 28380852
chr1 41826704 41826709 SP1 TRANSFAC yes 118278248
chr1 41826705 41826710 SP1 TRANSFAC yes 28380853
chr1 41826705 41826710 SP1 TRANSFAC yes 118278249
chr1 41826705 41826711 SP1 TRANSFAC yes 28380854
chr1 41826705 41826711 SP1 TRANSFAC yes 118278250
chr1 41826708 41826713 SP1 TRANSFAC yes 28380855
chr1 41826708 41826713 SP1 TRANSFAC yes 118278251
chr1 41826724 41826733 SP1 TRANSFAC yes 28380856
chr1 41826724 41826733 SP1 TRANSFAC yes 118278252
chr1 41826725 41826731 SP1 TRANSFAC yes 28380857
chr1 41826725 41826731 SP1 TRANSFAC yes 118278253
chr1 41826725 41826735 SP1 JASPAR yes 28380858
chr1 41826725 41826735 SP1 JASPAR yes 118278254
chr1 41826726 41826733 SP1 TRANSFAC yes 28380859
chr1 41826726 41826733 SP1 TRANSFAC yes 118278255
chr1 41826727 41826732 SP1 TRANSFAC yes 28380860
chr1 41826727 41826732 SP1 TRANSFAC yes 118278256
chr1 41826727 41826733 SP1 TRANSFAC yes 28380861
chr1 41826727 41826733 SP1 TRANSFAC yes 118278257
chr1 41826745 41826758 NFKB2 JASPAR yes 28380862
chr1 41826745 41826758 NFKB2 JASPAR yes 118278258
chr1 41826746 41826757 NFKB1 JASPAR yes 28380863
chr1 41826746 41826757 NFKB1 JASPAR yes 118278259
chr1 41826747 41826757 NFKB1 JASPAR yes 28380864
chr1 41826747 41826757 RELA JASPAR yes 28380865
chr1 41826747 41826757 NFKB1 JASPAR yes 118278260
chr1 41826747 41826757 RELA JASPAR yes 118278261
chr1 41826747 41826758 NFKB1 JASPAR yes 28380866
chr1 41826747 41826758 NFKB1 JASPAR yes 118278262
chr1 41826748 41826758 RELA JASPAR yes 28380867
chr1 41826748 41826758 REL JASPAR yes 28380868
chr1 41826748 41826758 RELA JASPAR yes 118278263
chr1 41826748 41826758 REL JASPAR yes 118278264
chr1 41826759 41826770 DMRT3 JASPAR yes 28380869
chr1 41826759 41826770 DMRT3 JASPAR yes 118278265
chr1 41826763 41826766 MYB TRANSFAC yes 28380870
chr1 41826763 41826766 MYB TRANSFAC yes 118278266
chr1 41826764 41826780 SOX8 JASPAR yes 28380871
chr1 41826764 41826780 SOX8 JASPAR yes 118278267
chr1 41826769 41826772 MYB TRANSFAC yes 28380872
chr1 41826769 41826772 MYB TRANSFAC yes 118278268
chr1 41826788 41826794 MAZ TRANSFAC yes 28380873
chr1 41826788 41826794 MAZ TRANSFAC yes 118278269
chr1 41826798 41826802 NFE TRANSFAC yes 28380874
chr1 41826798 41826802 NFE TRANSFAC yes 118278270
chr1 41826811 41826815 LFA1 TRANSFAC yes 28380875
chr1 41826811 41826815 LFA1 TRANSFAC yes 118278271
chr1 41826827 41826842 NFYB JASPAR yes 28380876
chr1 41826827 41826842 NFYB JASPAR yes 118278272
chr1 41826829 41826845 NFYA JASPAR yes 28380877
chr1 41826829 41826845 NFYA JASPAR yes 118278273
chr1 41826830 41826848 NFYA JASPAR yes 28380878
chr1 41826830 41826848 NFYA JASPAR yes 118278274
chr1 41826832 41826848 SOX4 JASPAR yes 28380879
chr1 41826832 41826848 SOX4 JASPAR yes 118278275
chr1 41826833 41826848 SOX21 JASPAR yes 28380880
chr1 41826833 41826848 SOX21 JASPAR yes 118278276
chr1 41826834 41826838 H1TF2 TRANSFAC yes 28380881
chr1 41826834 41826838 NFE TRANSFAC yes 28380882
chr1 41826834 41826838 SRF TRANSFAC yes 28380883
chr1 41826834 41826838 H1TF2 TRANSFAC yes 118278277
chr1 41826834 41826838 NFE TRANSFAC yes 118278278
chr1 41826834 41826838 SRF TRANSFAC yes 118278279
chr1 41826852 41826862 SP1 JASPAR yes 28380884
chr1 41826852 41826862 SP1 JASPAR yes 118278280
chr1 41826854 41826859 SP1 TRANSFAC yes 28380885
chr1 41826854 41826859 SP1 TRANSFAC yes 118278281
chr1 41826854 41826860 SP1 TRANSFAC yes 28380886
chr1 41826854 41826860 SP1 TRANSFAC yes 118278282
chr1 41826854 41826861 SP1 TRANSFAC yes 28380887
chr1 41826854 41826861 SP1 TRANSFAC yes 118278283
chr1 41826855 41826867 INSM1 JASPAR yes 28380888
chr1 41826855 41826867 INSM1 JASPAR yes 118278284
chr1 41826856 41826870 PLAG1 JASPAR yes 28380889
chr1 41826856 41826870 PLAG1 JASPAR yes 118278285
chr1 41826857 41826871 PLAG1 JASPAR yes 28380890
chr1 41826857 41826871 PLAG1 JASPAR yes 118278286
chr1 41826857 41826878 ZNF263 JASPAR yes 28380891
chr1 41826857 41826878 ZNF263 JASPAR yes 118278287
chr1 41826864 41826874 ZNF740 JASPAR yes 28380892
chr1 41826864 41826874 ZNF740 JASPAR yes 118278288
chr1 41826864 41826878 GLIS2 JASPAR yes 28380893
chr1 41826864 41826878 GLIS2 JASPAR yes 118278289
chr1 41826865 41826875 SP1 JASPAR yes 28380894
chr1 41826865 41826875 SP1 JASPAR yes 118278290
chr1 41826868 41826874 SP1 TRANSFAC yes 28380895
chr1 41826868 41826874 SP1 TRANSFAC yes 118278291
chr1 41826868 41826878 SP1 JASPAR yes 28380896
chr1 41826868 41826878 SP1 JASPAR yes 118278292
chr1 41826870 41826882 HINFP JASPAR yes 28380897
chr1 41826870 41826882 HINFP JASPAR yes 118278293
chr1 41826888 41826895 SP1 TRANSFAC yes 28380898
chr1 41826888 41826895 SP1 TRANSFAC yes 118278294
chr1 41826888 41826898 SP1 JASPAR yes 28380899
chr1 41826888 41826898 SP1 JASPAR yes 118278295
chr1 41826889 41826897 SP1 TRANSFAC yes 28380900
chr1 41826889 41826897 SP1 TRANSFAC yes 118278296
chr1 41826889 41826898 SP1 TRANSFAC yes 28380901
chr1 41826889 41826898 SP1 TRANSFAC yes 118278297
chr1 41826889 41826899 SP1 JASPAR yes 28380902
chr1 41826889 41826899 SP1 JASPAR yes 118278298
chr1 41826890 41826895 SP1 TRANSFAC yes 28380903
chr1 41826890 41826895 SP1 TRANSFAC yes 118278299
chr1 41826891 41826896 SP1 TRANSFAC yes 28380904
chr1 41826891 41826896 SP1 TRANSFAC yes 118278300
chr1 41826891 41826897 SP1 TRANSFAC yes 28380905
chr1 41826891 41826897 SP1 TRANSFAC yes 118278301
chr1 41826912 41826917 SP1 TRANSFAC yes 28380906
chr1 41826912 41826917 SP1 TRANSFAC yes 118278302
chr1 41826912 41826918 SP1 TRANSFAC yes 28380907
chr1 41826912 41826918 SP1 TRANSFAC yes 118278303
chr1 41826927 41826932 SP1 TRANSFAC yes 28380908
chr1 41826927 41826932 SP1 TRANSFAC yes 118278304
SNP sites on vista1320[chr1:41826642-41826952]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41826712 rs572437366 G A
SP1
260686
chr1 41826909 rs542847503 C A,T no 260687
Genes possibly regulated by vista1320[chr1:41826642-41826952]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41827594 41849262 + FOXO6 ENSG00000204060.4 41827594 0.84 1.0 575 99358
Expression level of Genes
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miRNAs possibly regulated by vista1320[chr1:41826642-41826952]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results