EnhancerDB
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  3. vista13217[chr12:46636369-46636708]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13217[chr12:46636369-46636708]
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Tissue distribution of vista13217
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Transcription factor that possibly regulate vista13217[chr12:46636369-46636708]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 46636377 46636392 FOXP1 JASPAR yes 82394516
chr12 46636379 46636399 RREB1 JASPAR yes 82394517
chr12 46636382 46636393 FOXA1 JASPAR yes 82394518
chr12 46636382 46636397 FOXA1 JASPAR yes 82394519
chr12 46636383 46636395 FOXC2 JASPAR yes 82394520
chr12 46636383 46636403 RREB1 JASPAR yes 82394521
chr12 46636384 46636396 FOXI1 JASPAR yes 82394522
chr12 46636384 46636404 RREB1 JASPAR yes 82394523
chr12 46636386 46636406 RREB1 JASPAR yes 82394524
chr12 46636389 46636409 RREB1 JASPAR yes 82394525
chr12 46636391 46636411 RREB1 JASPAR yes 82394526
chr12 46636394 46636414 RREB1 JASPAR yes 82394527
chr12 46636395 46636410 FOXP1 JASPAR yes 82394528
chr12 46636395 46636416 IRF1 JASPAR yes 82394529
chr12 46636397 46636417 RREB1 JASPAR yes 82394530
chr12 46636398 46636409 FOXP2 JASPAR yes 82394531
chr12 46636399 46636414 STAT2 JASPAR yes 82394532
chr12 46636400 46636412 IRF1 JASPAR yes 82394533
chr12 46636400 46636415 FOXP1 JASPAR yes 82394534
chr12 46636402 46636422 RREB1 JASPAR yes 82394535
chr12 46636414 46636435 IRF1 JASPAR yes 82394536
chr12 46636416 46636436 RREB1 JASPAR yes 82394537
chr12 46636417 46636431 ONECUT2 JASPAR yes 82394538
chr12 46636417 46636431 ONECUT3 JASPAR yes 82394539
chr12 46636418 46636430 IRF1 JASPAR yes 82394540
chr12 46636418 46636433 LEF1 JASPAR yes 82394541
chr12 46636418 46636433 STAT2 JASPAR yes 82394542
chr12 46636419 46636434 FOXP1 JASPAR yes 82394543
chr12 46636419 46636440 IRF1 JASPAR yes 82394544
chr12 46636421 46636441 RREB1 JASPAR yes 82394545
chr12 46636424 46636436 IRF1 JASPAR yes 82394546
chr12 46636434 46636438 YY1 TRANSFAC yes 82394547
chr12 46636449 46636461 HES5 JASPAR yes 82394548
chr12 46636449 46636461 HES7 JASPAR yes 82394549
chr12 46636450 46636460 BHLHE40 JASPAR yes 82394550
chr12 46636450 46636460 BHLHE41 JASPAR yes 82394551
chr12 46636450 46636460 CLOCK JASPAR yes 82394552
chr12 46636450 46636460 HEY1 JASPAR yes 82394553
chr12 46636450 46636460 HEY2 JASPAR yes 82394554
chr12 46636450 46636460 MAX JASPAR yes 82394555
chr12 46636450 46636460 MLXIPL JASPAR yes 82394556
chr12 46636450 46636460 MLX JASPAR yes 82394557
chr12 46636450 46636460 MNT JASPAR yes 82394558
chr12 46636450 46636460 TFE3 JASPAR yes 82394559
chr12 46636450 46636460 TFEB JASPAR yes 82394560
chr12 46636450 46636460 TFEC JASPAR yes 82394561
chr12 46636452 46636457 MYC TRANSFAC yes 82394562
chr12 46636452 46636457 USF1 TRANSFAC yes 82394563
chr12 46636452 46636457 USF2 TRANSFAC yes 82394564
chr12 46636458 46636470 ZBTB7A JASPAR yes 82394565
chr12 46636463 46636467 H4TF2 TRANSFAC yes 82394566
chr12 46636478 46636493 RUNX2 JASPAR yes 82394567
chr12 46636487 46636492 SP1 TRANSFAC yes 82394568
chr12 46636510 46636525 HNF4G JASPAR yes 82394569
chr12 46636511 46636525 RXRG JASPAR yes 82394570
chr12 46636513 46636517 ESR1 TRANSFAC yes 82394571
chr12 46636557 46636576 PAX5 JASPAR yes 82394572
chr12 46636559 46636563 LFA1 TRANSFAC yes 82394573
chr12 46636577 46636581 NFE TRANSFAC yes 82394574
chr12 46636585 46636599 ONECUT2 JASPAR yes 82394575
chr12 46636585 46636599 ONECUT3 JASPAR yes 82394576
chr12 46636585 46636600 FOXP1 JASPAR yes 82394577
chr12 46636585 46636606 IRF1 JASPAR yes 82394578
chr12 46636586 46636601 FOXA1 JASPAR yes 82394579
chr12 46636587 46636598 FOXB1 JASPAR yes 82394580
chr12 46636587 46636598 FOXC1 JASPAR yes 82394581
chr12 46636587 46636599 FOXC2 JASPAR yes 82394582
chr12 46636588 46636600 FOXI1 JASPAR yes 82394583
chr12 46636654 46636664 ZNF740 JASPAR yes 82394584
chr12 46636681 46636702 IRF1 JASPAR yes 82394585
chr12 46636681 46636702 ZNF263 JASPAR yes 82394586
chr12 46636684 46636698 SPIC JASPAR yes 82394587
chr12 46636685 46636706 ZNF263 JASPAR yes 82394588
chr12 46636686 46636707 IRF1 JASPAR yes 82394589
chr12 46636686 46636707 ZNF263 JASPAR yes 82394590
chr12 46636687 46636692 ETS2 TRANSFAC yes 82394591
chr12 46636688 46636703 PRDM1 JASPAR yes 82394592
chr12 46636693 46636708 FOXP1 JASPAR yes 82394593
chr12 46636700 46636705 ETS2 TRANSFAC yes 82394594
SNP sites on vista13217[chr12:46636369-46636708]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 46636401 rs533919058 A C
FOXP1 FOXP2 IRF1 RREB1 STAT2
2602485
chr12 46636405 rs149619359 AC A
FOXP1 FOXP2 IRF1 RREB1 STAT2
2602486
chr12 46636406 rs74793771 C A
FOXP1 FOXP2 IRF1 RREB1 STAT2
2602487
chr12 46636455 rs11183408 C T
BHLHE40 BHLHE41 CLOCK HES5 HES7 HEY1 HEY2 MAX MLX MLXIPL MNT MYC TFE3 TFEB TFEC USF1 USF2
2602488
chr12 46636584 rs113062673 CA C no 2602489
chr12 46636584 rs544511393 CA C no 2602490
chr12 46636655 rs149393658 C T
ZNF740
2602491
Genes possibly regulated by vista13217[chr12:46636369-46636708]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 46576846 46663800 - SLC38A1 ENSG00000111371.11 46663800 0.71 0.99 11975 72908
Expression level of Genes
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miRNAs possibly regulated by vista13217[chr12:46636369-46636708]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results