EnhancerDB
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  3. vista1326[chr1:41952015-41952273]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1326[chr1:41952015-41952273]
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Tissue distribution of vista1326
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Transcription factor that possibly regulate vista1326[chr1:41952015-41952273]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41952042 41952046 ESR1 TRANSFAC yes 118278536
chr1 41952044 41952055 ESRRB JASPAR yes 118278537
chr1 41952047 41952064 RARA JASPAR yes 118278538
chr1 41952059 41952063 LFA1 TRANSFAC yes 118278539
chr1 41952060 41952069 SNAI2 JASPAR yes 118278540
chr1 41952075 41952079 NFE TRANSFAC yes 118278541
chr1 41952075 41952087 PBX1 JASPAR yes 118278542
chr1 41952091 41952104 NFKB1 JASPAR yes 118278543
chr1 41952092 41952103 NFKB1 JASPAR yes 118278544
chr1 41952093 41952103 NFKB1 JASPAR yes 118278545
chr1 41952108 41952123 HNF4A JASPAR yes 118278546
chr1 41952109 41952124 NR2C2 JASPAR yes 118278547
chr1 41952116 41952131 NR2C2 JASPAR yes 118278548
chr1 41952117 41952131 GLIS2 JASPAR yes 118278549
chr1 41952117 41952131 GLIS3 JASPAR yes 118278550
chr1 41952152 41952167 MEF2C JASPAR yes 118278551
chr1 41952155 41952159 YY1 TRANSFAC yes 118278552
chr1 41952165 41952175 SREBF1 JASPAR yes 118278553
chr1 41952165 41952175 SREBF2 JASPAR yes 118278554
chr1 41952188 41952192 YY1 TRANSFAC yes 118278555
chr1 41952193 41952197 NFE TRANSFAC yes 118278556
chr1 41952232 41952244 INSM1 JASPAR yes 118278557
chr1 41952243 41952255 INSM1 JASPAR yes 118278558
chr1 41952246 41952256 ZNF740 JASPAR yes 118278559
chr1 41952251 41952268 RXRA JASPAR yes 118278560
chr1 41952252 41952258 ZNF354C JASPAR yes 118278561
chr1 41952254 41952259 GATA2 JASPAR yes 118278562
SNP sites on vista1326[chr1:41952015-41952273]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41952018 rs56099126 C T no 262144
chr1 41952060 rs556346042 G A
LFA1 RARA SNAI2
262145
chr1 41952150 rs193208719 G T no 262146
chr1 41952246 rs58011833 C G
INSM1 ZNF740
262147
chr1 41952248 rs59223652 TG T
INSM1 ZNF740
262148
chr1 41952248 rs796080773 TG T
INSM1 ZNF740
262149
chr1 41952273 rs56383645 G C no 262150
Genes possibly regulated by vista1326[chr1:41952015-41952273]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41944446 41950344 - EDN2 ENSG00000127129.5 41950344 0.82 0.97 576 98329
Expression level of Genes
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miRNAs possibly regulated by vista1326[chr1:41952015-41952273]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.11230938615249607 0.790987 0.676023 1312
Expression level of miRNAs
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