EnhancerDB
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  3. vista13292[chr12:48100473-48100834]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13292[chr12:48100473-48100834]
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Tissue distribution of vista13292
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Transcription factor that possibly regulate vista13292[chr12:48100473-48100834]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 48100478 48100496 IRF2 JASPAR yes 82398668
chr12 48100480 48100501 IRF1 JASPAR yes 82398669
chr12 48100482 48100497 IRF9 JASPAR yes 82398670
chr12 48100483 48100497 IRF7 JASPAR yes 82398671
chr12 48100483 48100497 IRF8 JASPAR yes 82398672
chr12 48100484 48100499 STAT2 JASPAR yes 82398673
chr12 48100484 48100502 IRF2 JASPAR yes 82398674
chr12 48100485 48100497 IRF1 JASPAR yes 82398675
chr12 48100485 48100500 FOXP1 JASPAR yes 82398676
chr12 48100486 48100507 IRF1 JASPAR yes 82398677
chr12 48100488 48100502 IRF7 JASPAR yes 82398678
chr12 48100491 48100506 MEF2C JASPAR yes 82398679
chr12 48100501 48100515 SPI1 JASPAR yes 82398680
chr12 48100517 48100532 FOXP1 JASPAR yes 82398681
chr12 48100524 48100530 HiNF-A TRANSFAC yes 82398682
chr12 48100525 48100537 FOXC2 JASPAR yes 82398683
chr12 48100526 48100538 FOXI1 JASPAR yes 82398684
chr12 48100531 48100545 STAT1 JASPAR yes 82398685
chr12 48100531 48100546 STAT2 JASPAR yes 82398686
chr12 48100539 48100554 PRDM1 JASPAR yes 82398687
chr12 48100541 48100551 NFATC3 JASPAR yes 82398688
chr12 48100547 48100551 YY1 TRANSFAC yes 82398689
chr12 48100564 48100567 MYB TRANSFAC yes 82398690
chr12 48100564 48100575 RUNX1 JASPAR yes 82398691
chr12 48100574 48100579 GATA2 JASPAR yes 82398692
chr12 48100590 48100602 ZBTB7B JASPAR yes 82398693
chr12 48100590 48100602 ZBTB7C JASPAR yes 82398694
chr12 48100611 48100626 HNF4A JASPAR yes 82398695
chr12 48100634 48100647 POU2F2 JASPAR yes 82398696
chr12 48100635 48100646 FOXB1 JASPAR yes 82398697
chr12 48100637 48100646 POU3F4 JASPAR yes 82398698
chr12 48100638 48100646 FOXL1 JASPAR yes 82398699
chr12 48100646 48100656 CLOCK JASPAR yes 82398700
chr12 48100646 48100656 HEY1 JASPAR yes 82398701
chr12 48100648 48100653 MYC TRANSFAC yes 82398702
chr12 48100648 48100653 USF1 TRANSFAC yes 82398703
chr12 48100648 48100653 USF2 TRANSFAC yes 82398704
chr12 48100650 48100670 RREB1 JASPAR yes 82398705
chr12 48100652 48100672 RREB1 JASPAR yes 82398706
chr12 48100654 48100674 RREB1 JASPAR yes 82398707
chr12 48100663 48100675 FOXI1 JASPAR yes 82398708
chr12 48100672 48100692 RREB1 JASPAR yes 82398709
chr12 48100674 48100694 RREB1 JASPAR yes 82398710
chr12 48100676 48100696 RREB1 JASPAR yes 82398711
chr12 48100678 48100698 RREB1 JASPAR yes 82398712
chr12 48100680 48100700 RREB1 JASPAR yes 82398713
chr12 48100682 48100702 RREB1 JASPAR yes 82398714
chr12 48100684 48100704 RREB1 JASPAR yes 82398715
chr12 48100686 48100706 RREB1 JASPAR yes 82398716
chr12 48100688 48100708 RREB1 JASPAR yes 82398717
chr12 48100690 48100710 RREB1 JASPAR yes 82398718
chr12 48100692 48100712 RREB1 JASPAR yes 82398719
chr12 48100694 48100714 RREB1 JASPAR yes 82398720
chr12 48100696 48100716 RREB1 JASPAR yes 82398721
chr12 48100698 48100718 RREB1 JASPAR yes 82398722
chr12 48100724 48100729 H4TF1 TRANSFAC yes 82398723
chr12 48100736 48100740 NFE TRANSFAC yes 82398724
chr12 48100737 48100742 GATA2 JASPAR yes 82398725
chr12 48100747 48100760 JUN JASPAR yes 82398726
chr12 48100748 48100761 ATF4 JASPAR yes 82398727
chr12 48100751 48100762 NFIL3 JASPAR yes 82398728
chr12 48100754 48100764 HMBOX1 JASPAR yes 82398729
chr12 48100756 48100759 MYB TRANSFAC yes 82398730
chr12 48100768 48100783 NFYB JASPAR yes 82398731
chr12 48100770 48100786 NFYA JASPAR yes 82398732
chr12 48100771 48100782 DUX4 JASPAR yes 82398733
chr12 48100771 48100789 NFYA JASPAR yes 82398734
chr12 48100775 48100779 H1TF2 TRANSFAC yes 82398735
chr12 48100775 48100779 NFE TRANSFAC yes 82398736
chr12 48100775 48100779 SRF TRANSFAC yes 82398737
chr12 48100799 48100804 GATA2 JASPAR yes 82398738
chr12 48100812 48100816 YY1 TRANSFAC yes 82398739
SNP sites on vista13292[chr12:48100473-48100834]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 48100549 rs59970963 A G
NFATC3 PRDM1 YY1
2613299
chr12 48100641 rs73104170 T C
FOXB1 FOXL1 POU2F2 POU3F4
2613300
chr12 48100651 rs36154262 CGT C
CLOCK HEY1 MYC RREB1 USF1 USF2
2613301
chr12 48100651 rs750545952 CGT C
CLOCK HEY1 MYC RREB1 USF1 USF2
2613302
chr12 48100674 rs573767829 GT G
FOXI1 RREB1
2613303
chr12 48100696 rs557213824 G C
RREB1
2613304
chr12 48100801 rs531943991 G A
GATA2
2613305
Genes possibly regulated by vista13292[chr12:48100473-48100834]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 48057070 48099844 - RPAP3 ENSG00000005175.5 48099844 0.65 0.97 11980 99371
chr12 48103517 48119350 - ENDOU ENSG00000111405.4 48119350 0.97 0.99 11981 81484
chr12 48128455 48164823 - RAPGEF3 ENSG00000079337.11 48164823 0.84 1.0 11982 36011
chr12 48147699 48176536 + SLC48A1 ENSG00000211584.9 48147699 0.76 0.99 11983 53135
chr12 48178706 48179787 + AC004466.1 ENSG00000268069.1 48178706 0.76 1.0 11985 22128
Expression level of Genes
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miRNAs possibly regulated by vista13292[chr12:48100473-48100834]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results