EnhancerDB
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  3. vista1331[chr1:41981831-41982007]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1331[chr1:41981831-41982007]
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Tissue distribution of vista1331
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Transcription factor that possibly regulate vista1331[chr1:41981831-41982007]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41981833 41981844 NFKB1 JASPAR yes 28397143
chr1 41981833 41981844 NFKB1 JASPAR yes 118278744
chr1 41981833 41981846 NFKB1 JASPAR yes 28397144
chr1 41981833 41981846 NFKB2 JASPAR yes 28397145
chr1 41981833 41981846 NFKB1 JASPAR yes 118278745
chr1 41981833 41981846 NFKB2 JASPAR yes 118278746
chr1 41981834 41981844 NFKB1 JASPAR yes 28397146
chr1 41981834 41981844 NFKB1 JASPAR yes 118278747
chr1 41981834 41981845 NFKB1 JASPAR yes 28397147
chr1 41981834 41981845 NFKB1 JASPAR yes 118278748
chr1 41981835 41981845 NFKB1 JASPAR yes 28397148
chr1 41981835 41981845 RELA JASPAR yes 28397149
chr1 41981835 41981845 REL JASPAR yes 28397150
chr1 41981835 41981845 NFKB1 JASPAR yes 118278749
chr1 41981835 41981845 RELA JASPAR yes 118278750
chr1 41981835 41981845 REL JASPAR yes 118278751
chr1 41981850 41981855 SP1 TRANSFAC yes 28397151
chr1 41981850 41981855 SP1 TRANSFAC yes 118278752
chr1 41981855 41981864 SP1 TRANSFAC yes 28397152
chr1 41981855 41981864 SP1 TRANSFAC yes 118278753
chr1 41981856 41981862 SP1 TRANSFAC yes 28397153
chr1 41981856 41981862 SP1 TRANSFAC yes 118278754
chr1 41981856 41981866 SP1 JASPAR yes 28397154
chr1 41981856 41981866 SP1 JASPAR yes 118278755
chr1 41981857 41981864 SP1 TRANSFAC yes 28397155
chr1 41981857 41981864 SP1 TRANSFAC yes 118278756
chr1 41981858 41981863 SP1 TRANSFAC yes 28397156
chr1 41981858 41981863 SP1 TRANSFAC yes 118278757
chr1 41981858 41981864 SP1 TRANSFAC yes 28397157
chr1 41981858 41981864 SP1 TRANSFAC yes 118278758
chr1 41981913 41981918 SP1 TRANSFAC yes 28397158
chr1 41981913 41981918 SP1 TRANSFAC yes 118278759
chr1 41981931 41981950 CTCF JASPAR yes 28397159
chr1 41981931 41981950 CTCF JASPAR yes 118278760
chr1 41981962 41981983 REST JASPAR yes 28397160
chr1 41981962 41981983 REST JASPAR yes 118278761
chr1 41981963 41981982 REST JASPAR yes 28397161
chr1 41981963 41981982 REST JASPAR yes 118278762
chr1 41981973 41981977 LFA1 TRANSFAC yes 28397162
chr1 41981973 41981977 LFA1 TRANSFAC yes 118278763
chr1 41981995 41982010 STAT1 JASPAR yes 28397163
chr1 41981995 41982010 STAT1 JASPAR yes 118278764
chr1 41981997 41982008 STAT3 JASPAR yes 28397164
chr1 41981997 41982008 STAT3 JASPAR yes 118278765
SNP sites on vista1331[chr1:41981831-41982007]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41981844 rs3122128 C T
NFKB1 NFKB2 REL RELA
262528
chr1 41981861 rs533234765 G A,T
SP1
262529
chr1 41981983 rs146351411 C T
REST
262530
Genes possibly regulated by vista1331[chr1:41981831-41982007]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41944446 41950344 - EDN2 ENSG00000127129.5 41950344 0.82 0.97 576 68513
Expression level of Genes
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miRNAs possibly regulated by vista1331[chr1:41981831-41982007]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.14198346309018015 0.790987 0.676023 1312
Expression level of miRNAs
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