EnhancerDB
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  3. vista13332[chr12:49624607-49624922]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13332[chr12:49624607-49624922]
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Tissue distribution of vista13332
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Transcription factor that possibly regulate vista13332[chr12:49624607-49624922]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 49624599 49624609 NFATC3 JASPAR yes 82400116
chr12 49624599 49624609 NFATC3 JASPAR yes 120766567
chr12 49624627 49624640 ZBTB18 JASPAR yes 82400117
chr12 49624627 49624640 ZBTB18 JASPAR yes 120766568
chr12 49624678 49624688 NFATC3 JASPAR yes 82400118
chr12 49624678 49624688 NFATC3 JASPAR yes 120766569
chr12 49624680 49624687 NFATC2 JASPAR yes 82400119
chr12 49624680 49624687 NFATC2 JASPAR yes 120766570
chr12 49624684 49624697 POU3F3 JASPAR yes 82400120
chr12 49624684 49624697 POU3F3 JASPAR yes 120766571
chr12 49624707 49624714 NKX3-1 JASPAR yes 82400121
chr12 49624707 49624714 NKX3-1 JASPAR yes 120766572
chr12 49624710 49624730 RREB1 JASPAR yes 82400122
chr12 49624710 49624730 RREB1 JASPAR yes 120766573
chr12 49624712 49624727 RUNX2 JASPAR yes 82400123
chr12 49624712 49624727 RUNX2 JASPAR yes 120766574
chr12 49624719 49624734 RUNX2 JASPAR yes 82400124
chr12 49624719 49624734 RUNX2 JASPAR yes 120766575
chr12 49624728 49624732 ESR1 TRANSFAC yes 82400125
chr12 49624728 49624732 ESR1 TRANSFAC yes 120766576
chr12 49624735 49624739 TEAD2 TRANSFAC yes 82400126
chr12 49624735 49624739 TEAD2 TRANSFAC yes 120766577
chr12 49624735 49624740 TBP TRANSFAC yes 82400127
chr12 49624735 49624740 TBP TRANSFAC yes 120766578
chr12 49624735 49624741 TMF TRANSFAC yes 82400128
chr12 49624735 49624741 TMF TRANSFAC yes 120766579
chr12 49624736 49624751 JUND JASPAR yes 82400129
chr12 49624736 49624751 JUND JASPAR yes 120766580
chr12 49624782 49624792 GABPA JASPAR yes 82400130
chr12 49624782 49624792 GABPA JASPAR yes 120766581
chr12 49624783 49624791 EHF JASPAR yes 82400131
chr12 49624783 49624791 EHF JASPAR yes 120766582
chr12 49624785 49624798 NR2F1 JASPAR yes 82400132
chr12 49624785 49624798 NR2F1 JASPAR yes 120766583
chr12 49624787 49624795 NR4A2 JASPAR yes 82400133
chr12 49624787 49624795 NR4A2 JASPAR yes 120766584
chr12 49624789 49624793 ESR1 TRANSFAC yes 82400134
chr12 49624789 49624793 ESR1 TRANSFAC yes 120766585
chr12 49624789 49624801 NHLH1 JASPAR yes 82400135
chr12 49624789 49624801 NHLH1 JASPAR yes 120766586
chr12 49624790 49624800 NHLH1 JASPAR yes 82400136
chr12 49624790 49624800 NHLH1 JASPAR yes 120766587
chr12 49624797 49624805 MEIS2 JASPAR yes 82400137
chr12 49624797 49624805 MEIS3 JASPAR yes 82400138
chr12 49624797 49624805 MEIS2 JASPAR yes 120766588
chr12 49624797 49624805 MEIS3 JASPAR yes 120766589
chr12 49624798 49624802 NFE TRANSFAC yes 82400139
chr12 49624798 49624802 NFE TRANSFAC yes 120766590
chr12 49624803 49624812 SRY JASPAR yes 82400140
chr12 49624803 49624812 SRY JASPAR yes 120766591
chr12 49624808 49624812 YY1 TRANSFAC yes 82400141
chr12 49624808 49624812 YY1 TRANSFAC yes 120766592
chr12 49624818 49624829 CEBPB JASPAR yes 82400142
chr12 49624818 49624829 CEBPB JASPAR yes 120766593
chr12 49624818 49624830 HLF JASPAR yes 82400143
chr12 49624818 49624830 HLF JASPAR yes 120766594
chr12 49624819 49624830 CEBPA JASPAR yes 82400144
chr12 49624819 49624830 CEBPA JASPAR yes 120766595
chr12 49624829 49624850 IRF1 JASPAR yes 82400145
chr12 49624829 49624850 IRF1 JASPAR yes 120766596
chr12 49624832 49624846 SPI1 JASPAR yes 82400146
chr12 49624832 49624846 SPI1 JASPAR yes 120766597
chr12 49624835 49624850 FOXP1 JASPAR yes 82400147
chr12 49624835 49624850 FOXP1 JASPAR yes 120766598
chr12 49624836 49624847 FOXP2 JASPAR yes 82400148
chr12 49624836 49624847 FOXP2 JASPAR yes 120766599
chr12 49624846 49624853 GATA1 TRANSFAC yes 82400149
chr12 49624846 49624853 GATA1 TRANSFAC yes 120766600
chr12 49624849 49624853 TEAD2 TRANSFAC yes 82400150
chr12 49624849 49624853 TEAD2 TRANSFAC yes 120766601
chr12 49624849 49624854 TBP TRANSFAC yes 82400151
chr12 49624849 49624854 TBP TRANSFAC yes 120766602
chr12 49624861 49624865 NFE TRANSFAC yes 82400152
chr12 49624861 49624865 NFE TRANSFAC yes 120766603
chr12 49624881 49624892 CDX2 JASPAR yes 82400153
chr12 49624881 49624892 CDX2 JASPAR yes 120766604
chr12 49624882 49624893 HOXA10 JASPAR yes 82400154
chr12 49624882 49624893 HOXA10 JASPAR yes 120766605
chr12 49624883 49624892 CDX1 JASPAR yes 82400155
chr12 49624883 49624892 CDX1 JASPAR yes 120766606
chr12 49624883 49624893 HOXA13 JASPAR yes 82400156
chr12 49624883 49624893 HOXB13 JASPAR yes 82400157
chr12 49624883 49624893 HOXD13 JASPAR yes 82400158
chr12 49624883 49624893 HOXA13 JASPAR yes 120766607
chr12 49624883 49624893 HOXB13 JASPAR yes 120766608
chr12 49624883 49624893 HOXD13 JASPAR yes 120766609
chr12 49624908 49624921 ZBTB18 JASPAR yes 82400159
chr12 49624908 49624921 ZBTB18 JASPAR yes 120766610
chr12 49624909 49624921 NHLH1 JASPAR yes 82400160
chr12 49624909 49624921 NHLH1 JASPAR yes 120766611
chr12 49624909 49624922 ZBTB18 JASPAR yes 82400161
chr12 49624909 49624922 ZBTB18 JASPAR yes 120766612
chr12 49624910 49624920 FIGLA JASPAR yes 82400162
chr12 49624910 49624920 MSC JASPAR yes 82400163
chr12 49624910 49624920 MYF6 JASPAR yes 82400164
chr12 49624910 49624920 NHLH1 JASPAR yes 82400165
chr12 49624910 49624920 TFAP4 JASPAR yes 82400166
chr12 49624910 49624920 FIGLA JASPAR yes 120766613
chr12 49624910 49624920 MSC JASPAR yes 120766614
chr12 49624910 49624920 MYF6 JASPAR yes 120766615
chr12 49624910 49624920 NHLH1 JASPAR yes 120766616
chr12 49624910 49624920 TFAP4 JASPAR yes 120766617
chr12 49624910 49624922 TAL1 JASPAR yes 82400167
chr12 49624910 49624922 TAL1 JASPAR yes 120766618
chr12 49624913 49624925 FOXI1 JASPAR yes 82400168
chr12 49624913 49624925 FOXI1 JASPAR yes 120766619
SNP sites on vista13332[chr12:49624607-49624922]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 49624694 rs147636086 T C
POU3F3
2619767
chr12 49624723 rs142205982 G A
RREB1 RUNX2
2619768
chr12 49624790 rs567711545 G A
EHF ESR1 GABPA NHLH1 NR2F1 NR4A2
2619769
chr12 49624869 rs150145389 G T no 2619770
Genes possibly regulated by vista13332[chr12:49624607-49624922]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 49521565 49525180 - TUBA1B ENSG00000123416.11 49525180 0.87 0.99 12023 573
chr12 49578579 49583107 - TUBA1A ENSG00000167552.9 49583107 0.81 0.98 12024 58500
chr12 49582519 49667114 + TUBA1C ENSG00000167553.10 49582519 0.96 1.0 12025 57912
chr12 49687035 49692465 + PRPH ENSG00000135406.9 49687035 0.95 1.0 12026 37887
chr12 49717019 49725514 + TROAP ENSG00000135451.8 49717019 0.92 1.0 12027 7903
Expression level of Genes
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miRNAs possibly regulated by vista13332[chr12:49624607-49624922]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results