EnhancerDB
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  3. vista13335[chr12:49641026-49641246]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13335[chr12:49641026-49641246]
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Tissue distribution of vista13335
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Transcription factor that possibly regulate vista13335[chr12:49641026-49641246]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 49641021 49641039 TP53 JASPAR yes 82400238
chr12 49641021 49641039 TP53 JASPAR yes 120768159
chr12 49641035 49641050 FOXP1 JASPAR yes 82400239
chr12 49641035 49641050 FOXP1 JASPAR yes 120768160
chr12 49641044 49641050 SOX10 JASPAR yes 82400240
chr12 49641044 49641050 SOX10 JASPAR yes 120768161
chr12 49641066 49641077 FOSL2 JASPAR yes 82400241
chr12 49641066 49641077 FOSL2 JASPAR yes 120768162
chr12 49641067 49641078 NFE2 JASPAR yes 82400242
chr12 49641067 49641078 NFE2 JASPAR yes 120768163
chr12 49641082 49641103 LUN1 TRANSFAC yes 82400243
chr12 49641082 49641103 LUN1 TRANSFAC yes 120768164
chr12 49641107 49641112 SP1 TRANSFAC yes 82400244
chr12 49641107 49641112 SP1 TRANSFAC yes 120768165
chr12 49641110 49641123 NFKB1 JASPAR yes 82400245
chr12 49641110 49641123 NFKB1 JASPAR yes 120768166
chr12 49641112 49641118 ZNF354C JASPAR yes 82400246
chr12 49641112 49641118 ZNF354C JASPAR yes 120768167
chr12 49641115 49641126 USF1 JASPAR yes 82400247
chr12 49641115 49641126 USF2 JASPAR yes 82400248
chr12 49641115 49641126 USF1 JASPAR yes 120768168
chr12 49641115 49641126 USF2 JASPAR yes 120768169
chr12 49641116 49641126 SREBF2 JASPAR yes 82400249
chr12 49641116 49641126 SREBF2 JASPAR yes 120768170
chr12 49641118 49641123 USF2 TRANSFAC yes 82400250
chr12 49641118 49641123 USF2 TRANSFAC yes 120768171
chr12 49641121 49641134 NR2F1 JASPAR yes 82400251
chr12 49641121 49641134 NR2F1 JASPAR yes 120768172
chr12 49641122 49641130 CREB1 JASPAR yes 82400252
chr12 49641122 49641130 CREB1 JASPAR yes 120768173
chr12 49641123 49641141 RARA JASPAR yes 82400253
chr12 49641123 49641141 RARA JASPAR yes 120768174
chr12 49641125 49641129 ESR1 TRANSFAC yes 82400254
chr12 49641125 49641129 ESR1 TRANSFAC yes 120768175
chr12 49641133 49641153 ESR1 JASPAR yes 82400255
chr12 49641133 49641153 ESR1 JASPAR yes 120768176
chr12 49641136 49641156 PPARG JASPAR yes 82400256
chr12 49641136 49641156 PPARG JASPAR yes 120768177
chr12 49641137 49641155 NR3C1 JASPAR yes 82400257
chr12 49641137 49641155 NR3C1 JASPAR yes 120768178
chr12 49641150 49641154 H1TF2 TRANSFAC yes 82400258
chr12 49641150 49641154 NFE TRANSFAC yes 82400259
chr12 49641150 49641154 SRF TRANSFAC yes 82400260
chr12 49641150 49641154 H1TF2 TRANSFAC yes 120768179
chr12 49641150 49641154 NFE TRANSFAC yes 120768180
chr12 49641150 49641154 SRF TRANSFAC yes 120768181
chr12 49641154 49641165 CEBPA JASPAR yes 82400261
chr12 49641154 49641165 CEBPA JASPAR yes 120768182
chr12 49641154 49641166 HLF JASPAR yes 82400262
chr12 49641154 49641166 HLF JASPAR yes 120768183
chr12 49641155 49641166 CEBPB JASPAR yes 82400263
chr12 49641155 49641166 CEBPB JASPAR yes 120768184
chr12 49641156 49641169 NFKB1 JASPAR yes 82400264
chr12 49641156 49641169 NFKB2 JASPAR yes 82400265
chr12 49641156 49641169 NFKB1 JASPAR yes 120768185
chr12 49641156 49641169 NFKB2 JASPAR yes 120768186
chr12 49641167 49641171 YY1 TRANSFAC yes 82400266
chr12 49641167 49641171 YY1 TRANSFAC yes 120768187
chr12 49641186 49641204 MAFF JASPAR yes 82400267
chr12 49641186 49641204 MAFF JASPAR yes 120768188
chr12 49641196 49641208 YY1 JASPAR yes 82400268
chr12 49641196 49641208 YY1 JASPAR yes 120768189
chr12 49641209 49641219 ID4 JASPAR yes 82400269
chr12 49641209 49641219 TCF3 JASPAR yes 82400270
chr12 49641209 49641219 TCF4 JASPAR yes 82400271
chr12 49641209 49641219 ID4 JASPAR yes 120768190
chr12 49641209 49641219 TCF3 JASPAR yes 120768191
chr12 49641209 49641219 TCF4 JASPAR yes 120768192
chr12 49641210 49641219 SNAI2 JASPAR yes 82400272
chr12 49641210 49641219 SNAI2 JASPAR yes 120768193
chr12 49641211 49641216 USF2 TRANSFAC yes 82400273
chr12 49641211 49641216 USF2 TRANSFAC yes 120768194
chr12 49641232 49641250 NFYA JASPAR yes 82400274
chr12 49641232 49641250 NFYA JASPAR yes 120768195
SNP sites on vista13335[chr12:49641026-49641246]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 49641110 rs12308782 T C
NFKB1 SP1
2619968
chr12 49641183 rs548407285 T C no 2619969
chr12 49641185 rs568303735 C A no 2619970
chr12 49641213 rs11168933 A G
ID4 SNAI2 TCF3 TCF4 USF2
2619971
Genes possibly regulated by vista13335[chr12:49641026-49641246]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 49578579 49583107 - TUBA1A ENSG00000167552.9 49583107 0.81 0.98 12024 42081
chr12 49582519 49667114 + TUBA1C ENSG00000167553.10 49582519 0.96 1.0 12025 41493
chr12 49687035 49692465 + PRPH ENSG00000135406.9 49687035 0.95 1.0 12026 54211
chr12 49717019 49725514 + TROAP ENSG00000135451.8 49717019 0.92 1.0 12027 24227
chr12 49726200 49730971 - C1QL4 ENSG00000186897.3 49730971 0.97 1.0 12028 10275
chr12 49740700 49751309 + DNAJC22 ENSG00000178401.10 49740700 0.96 1.0 12029 546
Expression level of Genes
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miRNAs possibly regulated by vista13335[chr12:49641026-49641246]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results