EnhancerDB
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  3. vista1334[chr1:42036839-42037120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1334[chr1:42036839-42037120]
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Tissue distribution of vista1334
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Transcription factor that possibly regulate vista1334[chr1:42036839-42037120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42036839 42036859 RREB1 JASPAR yes 28399624
chr1 42036839 42036859 RREB1 JASPAR yes 118278876
chr1 42036842 42036846 H1TF2 TRANSFAC yes 28399625
chr1 42036842 42036846 NFE TRANSFAC yes 28399626
chr1 42036842 42036846 SRF TRANSFAC yes 28399627
chr1 42036842 42036846 H1TF2 TRANSFAC yes 118278877
chr1 42036842 42036846 NFE TRANSFAC yes 118278878
chr1 42036842 42036846 SRF TRANSFAC yes 118278879
chr1 42036842 42036852 HOXB13 JASPAR yes 28399628
chr1 42036842 42036852 HOXB13 JASPAR yes 118278880
chr1 42036843 42036863 RREB1 JASPAR yes 28399629
chr1 42036843 42036863 RREB1 JASPAR yes 118278881
chr1 42036846 42036849 MYB TRANSFAC yes 28399630
chr1 42036846 42036849 MYB TRANSFAC yes 118278882
chr1 42036862 42036872 SP1 JASPAR yes 28399631
chr1 42036862 42036872 SP1 JASPAR yes 118278883
chr1 42036869 42036873 ESR1 TRANSFAC yes 28399632
chr1 42036869 42036873 ESR1 TRANSFAC yes 118278884
chr1 42036874 42036884 FIGLA JASPAR yes 28399633
chr1 42036874 42036884 FIGLA JASPAR yes 118278885
chr1 42036886 42036890 NFE TRANSFAC yes 28399634
chr1 42036886 42036890 NFE TRANSFAC yes 118278886
chr1 42036887 42036903 SOX4 JASPAR yes 28399635
chr1 42036887 42036903 SOX4 JASPAR yes 118278887
chr1 42036888 42036903 SOX21 JASPAR yes 28399636
chr1 42036888 42036903 SOX21 JASPAR yes 118278888
chr1 42036892 42036913 ZNF263 JASPAR yes 28399637
chr1 42036892 42036913 ZNF263 JASPAR yes 118278889
chr1 42036900 42036910 GABPA JASPAR yes 28399638
chr1 42036900 42036910 GABPA JASPAR yes 118278890
chr1 42036900 42036913 ELF1 JASPAR yes 28399639
chr1 42036900 42036913 ELF1 JASPAR yes 118278891
chr1 42036903 42036910 SPIB JASPAR yes 28399640
chr1 42036903 42036910 SPIB JASPAR yes 118278892
chr1 42036905 42036918 ELF3 JASPAR yes 28399641
chr1 42036905 42036918 ELF3 JASPAR yes 118278893
chr1 42036906 42036916 GABPA JASPAR yes 28399642
chr1 42036906 42036916 GABPA JASPAR yes 118278894
chr1 42036906 42036917 ELF5 JASPAR yes 28399643
chr1 42036906 42036917 ELF5 JASPAR yes 118278895
chr1 42036906 42036918 EHF JASPAR yes 28399644
chr1 42036906 42036918 EHF JASPAR yes 118278896
chr1 42036908 42036914 ETS1 JASPAR yes 28399645
chr1 42036908 42036914 SPI1 JASPAR yes 28399646
chr1 42036908 42036914 ETS1 JASPAR yes 118278897
chr1 42036908 42036914 SPI1 JASPAR yes 118278898
chr1 42036943 42036948 ETS2 TRANSFAC yes 28399647
chr1 42036943 42036948 ETS2 TRANSFAC yes 118278899
chr1 42036955 42036966 ESRRB JASPAR yes 28399648
chr1 42036955 42036966 ESRRB JASPAR yes 118278900
chr1 42036968 42036979 FOXC1 JASPAR yes 28399649
chr1 42036968 42036979 FOXC1 JASPAR yes 118278901
chr1 42036982 42036986 YY1 TRANSFAC yes 28399650
chr1 42036982 42036986 YY1 TRANSFAC yes 118278902
chr1 42036992 42036997 ETS2 TRANSFAC yes 28399651
chr1 42036992 42036997 ETS2 TRANSFAC yes 118278903
chr1 42037003 42037006 MYB TRANSFAC yes 28399652
chr1 42037003 42037006 MYB TRANSFAC yes 118278904
chr1 42037006 42037012 SOX10 JASPAR yes 28399653
chr1 42037006 42037012 SOX10 JASPAR yes 118278905
chr1 42037011 42037024 EOMES JASPAR yes 28399654
chr1 42037011 42037024 EOMES JASPAR yes 118278906
chr1 42037012 42037022 TBR1 JASPAR yes 28399655
chr1 42037012 42037022 TBR1 JASPAR yes 118278907
chr1 42037015 42037026 FOXC1 JASPAR yes 28399656
chr1 42037015 42037026 FOXC1 JASPAR yes 118278908
chr1 42037016 42037027 FOXP2 JASPAR yes 28399657
chr1 42037016 42037027 FOXP2 JASPAR yes 118278909
chr1 42037017 42037025 FOXO3 JASPAR yes 28399658
chr1 42037017 42037025 FOXO3 JASPAR yes 118278910
chr1 42037018 42037030 IRF1 JASPAR yes 28399659
chr1 42037018 42037030 IRF1 JASPAR yes 118278911
chr1 42037033 42037036 MYB TRANSFAC yes 28399660
chr1 42037033 42037036 MYB TRANSFAC yes 118278912
chr1 42037047 42037055 FOXO3 JASPAR yes 28399661
chr1 42037047 42037055 FOXO3 JASPAR yes 118278913
chr1 42037066 42037077 NRF1 JASPAR yes 28399662
chr1 42037066 42037077 NRF1 JASPAR yes 118278914
chr1 42037068 42037077 SNAI2 JASPAR yes 28399663
chr1 42037068 42037077 SNAI2 JASPAR yes 118278915
chr1 42037068 42037078 ID4 JASPAR yes 28399664
chr1 42037068 42037078 TCF3 JASPAR yes 28399665
chr1 42037068 42037078 TCF4 JASPAR yes 28399666
chr1 42037068 42037078 ID4 JASPAR yes 118278916
chr1 42037068 42037078 TCF3 JASPAR yes 118278917
chr1 42037068 42037078 TCF4 JASPAR yes 118278918
chr1 42037088 42037094 YY1 JASPAR yes 28399667
chr1 42037088 42037094 YY1 JASPAR yes 118278919
chr1 42037104 42037115 NFKB1 JASPAR yes 28399668
chr1 42037104 42037115 NFKB1 JASPAR yes 118278920
chr1 42037105 42037109 LFA1 TRANSFAC yes 28399669
chr1 42037105 42037109 LFA1 TRANSFAC yes 118278921
chr1 42037111 42037122 EBF1 JASPAR yes 28399670
chr1 42037111 42037122 EBF1 JASPAR yes 118278922
chr1 42037117 42037134 BCL6B JASPAR yes 28399671
chr1 42037117 42037134 BCL6B JASPAR yes 118278923
chr1 42037118 42037133 STAT1 JASPAR yes 28399672
chr1 42037118 42037133 STAT1 JASPAR yes 118278924
chr1 42037120 42037131 STAT3 JASPAR yes 28399673
chr1 42037120 42037131 STAT3 JASPAR yes 118278925
SNP sites on vista1334[chr1:42036839-42037120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42036859 rs1885653 C T
RREB1
262866
chr1 42036871 rs567779385 GT G
ESR1 SP1
262867
chr1 42036892 rs191537710 A G
SOX21 SOX4 ZNF263
262868
chr1 42036954 rs116252279 T C no 262869
Genes possibly regulated by vista1334[chr1:42036839-42037120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41944446 41950344 - EDN2 ENSG00000127129.5 41950344 0.82 0.97 576 13505
Expression level of Genes
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miRNAs possibly regulated by vista1334[chr1:42036839-42037120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.14556372975163948 0.790987 0.676023 1312
Expression level of miRNAs
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