EnhancerDB
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  3. vista1336[chr1:42073844-42074019]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1336[chr1:42073844-42074019]
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Tissue distribution of vista1336
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Transcription factor that possibly regulate vista1336[chr1:42073844-42074019]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42073847 42073860 SMAD2 JASPAR yes 28400555
chr1 42073847 42073860 SMAD2 JASPAR yes 118278949
chr1 42073867 42073882 TFAP2C JASPAR yes 28400556
chr1 42073867 42073882 TFAP2C JASPAR yes 118278950
chr1 42073876 42073886 MZF1 JASPAR yes 28400557
chr1 42073876 42073886 MZF1 JASPAR yes 118278951
chr1 42073906 42073927 REST JASPAR yes 28400558
chr1 42073906 42073927 REST JASPAR yes 118278952
chr1 42073910 42073913 MYB TRANSFAC yes 28400559
chr1 42073910 42073913 MYB TRANSFAC yes 118278953
chr1 42073916 42073929 ELF1 JASPAR yes 28400560
chr1 42073916 42073929 ELF1 JASPAR yes 118278954
chr1 42073918 42073929 ETV2 JASPAR yes 28400561
chr1 42073918 42073929 ETV2 JASPAR yes 118278955
chr1 42073919 42073929 ELK1 JASPAR yes 28400562
chr1 42073919 42073929 ELK3 JASPAR yes 28400563
chr1 42073919 42073929 ERF JASPAR yes 28400564
chr1 42073919 42073929 ERG JASPAR yes 28400565
chr1 42073919 42073929 ETS1 JASPAR yes 28400566
chr1 42073919 42073929 ETV1 JASPAR yes 28400567
chr1 42073919 42073929 ETV3 JASPAR yes 28400568
chr1 42073919 42073929 ETV4 JASPAR yes 28400569
chr1 42073919 42073929 ETV6 JASPAR yes 28400570
chr1 42073919 42073929 FEV JASPAR yes 28400571
chr1 42073919 42073929 FLI1 JASPAR yes 28400572
chr1 42073919 42073929 GABPA JASPAR yes 28400573
chr1 42073919 42073929 ELK1 JASPAR yes 118278956
chr1 42073919 42073929 ELK3 JASPAR yes 118278957
chr1 42073919 42073929 ERF JASPAR yes 118278958
chr1 42073919 42073929 ERG JASPAR yes 118278959
chr1 42073919 42073929 ETS1 JASPAR yes 118278960
chr1 42073919 42073929 ETV1 JASPAR yes 118278961
chr1 42073919 42073929 ETV3 JASPAR yes 118278962
chr1 42073919 42073929 ETV4 JASPAR yes 118278963
chr1 42073919 42073929 ETV6 JASPAR yes 118278964
chr1 42073919 42073929 FEV JASPAR yes 118278965
chr1 42073919 42073929 FLI1 JASPAR yes 118278966
chr1 42073919 42073929 GABPA JASPAR yes 118278967
chr1 42073919 42073930 ELK4 JASPAR yes 28400574
chr1 42073919 42073930 FLI1 JASPAR yes 28400575
chr1 42073919 42073930 ELK4 JASPAR yes 118278968
chr1 42073919 42073930 FLI1 JASPAR yes 118278969
chr1 42073920 42073928 EHF JASPAR yes 28400576
chr1 42073920 42073928 FEV JASPAR yes 28400577
chr1 42073920 42073928 EHF JASPAR yes 118278970
chr1 42073920 42073928 FEV JASPAR yes 118278971
chr1 42073921 42073928 SPI1 JASPAR yes 28400578
chr1 42073921 42073928 SPI1 JASPAR yes 118278972
chr1 42073923 42073938 RFX5 JASPAR yes 28400579
chr1 42073923 42073938 RFX5 JASPAR yes 118278973
chr1 42073932 42073943 NFKB1 JASPAR yes 28400580
chr1 42073932 42073943 NFKB1 JASPAR yes 118278974
chr1 42073933 42073943 NFKB1 JASPAR yes 28400581
chr1 42073933 42073943 RELA JASPAR yes 28400582
chr1 42073933 42073943 NFKB1 JASPAR yes 118278975
chr1 42073933 42073943 RELA JASPAR yes 118278976
chr1 42073946 42073956 NFIA JASPAR yes 28400583
chr1 42073946 42073956 NFIA JASPAR yes 118278977
chr1 42073948 42073954 NFIC JASPAR yes 28400584
chr1 42073948 42073954 NFIC JASPAR yes 118278978
chr1 42073973 42073978 SP1 TRANSFAC yes 28400585
chr1 42073973 42073978 SP1 TRANSFAC yes 118278979
chr1 42073973 42073982 HIC2 JASPAR yes 28400586
chr1 42073973 42073982 HIC2 JASPAR yes 118278980
chr1 42073976 42073980 LFA1 TRANSFAC yes 28400587
chr1 42073976 42073980 LFA1 TRANSFAC yes 118278981
chr1 42074010 42074016 NFIC JASPAR yes 28400588
chr1 42074010 42074016 NFIC JASPAR yes 118278982
chr1 42074012 42074016 H1TF2 TRANSFAC yes 28400589
chr1 42074012 42074016 NFE TRANSFAC yes 28400590
chr1 42074012 42074016 SRF TRANSFAC yes 28400591
chr1 42074012 42074016 H1TF2 TRANSFAC yes 118278983
chr1 42074012 42074016 NFE TRANSFAC yes 118278984
chr1 42074012 42074016 SRF TRANSFAC yes 118278985
SNP sites on vista1336[chr1:42073844-42074019]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42073877 rs35282355 G A
MZF1 TFAP2C
262965
chr1 42073905 rs12045563 T C no 262966
chr1 42073973 rs372053201 T C
HIC2 SP1
262967
chr1 42073997 rs76770224 C T no 262968
chr1 42074018 rs536025295 CCTT C no 262969
Genes possibly regulated by vista1336[chr1:42073844-42074019]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1336[chr1:42073844-42074019]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.1831959916646569 0.790987 0.676023 1312
Expression level of miRNAs
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