EnhancerDB
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  3. vista13366[chr12:50378385-50378667]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13366[chr12:50378385-50378667]
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Tissue distribution of vista13366
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Transcription factor that possibly regulate vista13366[chr12:50378385-50378667]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 50378395 50378401 ETS1 JASPAR yes 82401434
chr12 50378395 50378401 ETS1 JASPAR yes 120810409
chr12 50378395 50378406 NFKB1 JASPAR yes 82401435
chr12 50378395 50378406 NFKB1 JASPAR yes 120810410
chr12 50378396 50378406 RELA JASPAR yes 82401436
chr12 50378396 50378406 REL JASPAR yes 82401437
chr12 50378396 50378406 RELA JASPAR yes 120810411
chr12 50378396 50378406 REL JASPAR yes 120810412
chr12 50378401 50378412 NRF1 JASPAR yes 82401438
chr12 50378401 50378412 NRF1 JASPAR yes 120810413
chr12 50378411 50378432 ZNF263 JASPAR yes 82401439
chr12 50378411 50378432 ZNF263 JASPAR yes 120810414
chr12 50378447 50378460 ZBTB18 JASPAR yes 82401440
chr12 50378447 50378460 ZBTB18 JASPAR yes 120810415
chr12 50378449 50378461 TAL1 JASPAR yes 82401441
chr12 50378449 50378461 TAL1 JASPAR yes 120810416
chr12 50378485 50378494 NKX3-2 JASPAR yes 82401442
chr12 50378485 50378494 NKX3-2 JASPAR yes 120810417
chr12 50378490 50378500 MZF1 JASPAR yes 82401443
chr12 50378490 50378500 MZF1 JASPAR yes 120810418
chr12 50378494 50378505 NFKB1 JASPAR yes 82401444
chr12 50378494 50378505 NFKB1 JASPAR yes 120810419
chr12 50378496 50378506 RELA JASPAR yes 82401445
chr12 50378496 50378506 RELA JASPAR yes 120810420
chr12 50378505 50378520 MYBL2 JASPAR yes 82401446
chr12 50378505 50378520 MYBL2 JASPAR yes 120810421
chr12 50378508 50378523 HNF1A JASPAR yes 82401447
chr12 50378508 50378523 HNF1A JASPAR yes 120810422
chr12 50378509 50378522 HNF1B JASPAR yes 82401448
chr12 50378509 50378522 HNF1B JASPAR yes 120810423
chr12 50378511 50378521 PAX3 JASPAR yes 82401449
chr12 50378511 50378521 PAX7 JASPAR yes 82401450
chr12 50378511 50378521 PAX3 JASPAR yes 120810424
chr12 50378511 50378521 PAX7 JASPAR yes 120810425
chr12 50378513 50378528 MYBL2 JASPAR yes 82401451
chr12 50378513 50378528 MYBL2 JASPAR yes 120810426
chr12 50378517 50378526 PITX3 JASPAR yes 82401452
chr12 50378517 50378526 PITX3 JASPAR yes 120810427
chr12 50378517 50378527 GSC JASPAR yes 82401453
chr12 50378517 50378527 GSC JASPAR yes 120810428
chr12 50378517 50378528 FOXH1 JASPAR yes 82401454
chr12 50378517 50378528 FOXH1 JASPAR yes 120810429
chr12 50378518 50378526 RHOXF1 JASPAR yes 82401455
chr12 50378518 50378526 RHOXF1 JASPAR yes 120810430
chr12 50378521 50378527 ZNF354C JASPAR yes 82401456
chr12 50378521 50378527 ZNF354C JASPAR yes 120810431
chr12 50378528 50378538 HEY2 JASPAR yes 82401457
chr12 50378528 50378538 HEY2 JASPAR yes 120810432
chr12 50378550 50378556 YY1 JASPAR yes 82401458
chr12 50378550 50378556 YY1 JASPAR yes 120810433
chr12 50378564 50378584 TP53 JASPAR yes 82401459
chr12 50378564 50378584 TP53 JASPAR yes 120810434
chr12 50378570 50378591 REST JASPAR yes 82401460
chr12 50378570 50378591 REST JASPAR yes 120810435
chr12 50378571 50378590 REST JASPAR yes 82401461
chr12 50378571 50378590 REST JASPAR yes 120810436
chr12 50378573 50378584 ESRRA JASPAR yes 82401462
chr12 50378573 50378584 ESRRA JASPAR yes 120810437
chr12 50378574 50378578 NFE TRANSFAC yes 82401463
chr12 50378574 50378578 NFE TRANSFAC yes 120810438
chr12 50378594 50378605 FOXA1 JASPAR yes 82401464
chr12 50378594 50378605 FOXA1 JASPAR yes 120810439
chr12 50378599 50378615 ZNF143 JASPAR yes 82401465
chr12 50378599 50378615 ZNF143 JASPAR yes 120810440
chr12 50378622 50378633 FOXP2 JASPAR yes 82401466
chr12 50378622 50378633 FOXP2 JASPAR yes 120810441
chr12 50378623 50378631 FOXO3 JASPAR yes 82401467
chr12 50378623 50378631 FOXO3 JASPAR yes 120810442
chr12 50378629 50378642 SMAD2 JASPAR yes 82401468
chr12 50378629 50378642 SMAD2 JASPAR yes 120810443
chr12 50378650 50378659 NKX2-8 JASPAR yes 82401469
chr12 50378650 50378659 NKX2-8 JASPAR yes 120810444
chr12 50378650 50378660 NKX2-3 JASPAR yes 82401470
chr12 50378650 50378660 NKX2-3 JASPAR yes 120810445
chr12 50378662 50378683 ZNF263 JASPAR yes 82401471
chr12 50378662 50378683 ZNF263 JASPAR yes 120810446
SNP sites on vista13366[chr12:50378385-50378667]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 50378492 rs17124264 T C
MZF1 NKX3-2
2624428
chr12 50378534 rs140151253 G A
HEY2
2624429
chr12 50378566 rs74089213 G A
TP53
2624430
chr12 50378625 rs17124267 G A
FOXO3 FOXP2
2624431
Genes possibly regulated by vista13366[chr12:50378385-50378667]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 50260679 50298000 - FAIM2 ENSG00000135472.4 50298000 0.78 0.94 12039 19615
chr12 50344524 50352664 + AQP2 ENSG00000167580.3 50344524 1.0 0.92 12040 66139
chr12 50355653 50359464 + AQP5 ENSG00000161798.6 50355653 0.89 0.94 12041 77268
chr12 50360977 50370922 + AQP6 ENSG00000086159.8 50360977 1.0 1.0 12042 82592
chr12 50370706 50426919 - RACGAP1 ENSG00000161800.8 50426919 0.84 1.0 12043 51748
chr12 50451331 50477394 + ASIC1 ENSG00000110881.7 50451331 0.8 1.0 12044 27336
Expression level of Genes
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miRNAs possibly regulated by vista13366[chr12:50378385-50378667]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results