EnhancerDB
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  3. vista1337[chr1:42081979-42082196]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1337[chr1:42081979-42082196]
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Tissue distribution of vista1337
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Transcription factor that possibly regulate vista1337[chr1:42081979-42082196]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42081977 42081989 INSM1 JASPAR yes 28401614
chr1 42081977 42081989 TFAP2A JASPAR yes 28401615
chr1 42081977 42081989 TFAP2B JASPAR yes 28401616
chr1 42081977 42081989 TFAP2C JASPAR yes 28401617
chr1 42081977 42081989 INSM1 JASPAR yes 118278986
chr1 42081977 42081989 TFAP2A JASPAR yes 118278987
chr1 42081977 42081989 TFAP2B JASPAR yes 118278988
chr1 42081977 42081989 TFAP2C JASPAR yes 118278989
chr1 42081993 42081999 LEF1 TRANSFAC yes 28401618
chr1 42081993 42081999 SOX10 JASPAR yes 28401619
chr1 42081993 42081999 LEF1 TRANSFAC yes 118278990
chr1 42081993 42081999 SOX10 JASPAR yes 118278991
chr1 42081999 42082005 MZF1 JASPAR yes 28401620
chr1 42081999 42082005 MZF1 JASPAR yes 118278992
chr1 42082000 42082009 ZEB1 JASPAR yes 28401621
chr1 42082000 42082009 ZEB1 JASPAR yes 118278993
chr1 42082001 42082011 TCF3 JASPAR yes 28401622
chr1 42082001 42082011 TCF4 JASPAR yes 28401623
chr1 42082001 42082011 TCF3 JASPAR yes 118278994
chr1 42082001 42082011 TCF4 JASPAR yes 118278995
chr1 42082002 42082011 SNAI2 JASPAR yes 28401624
chr1 42082002 42082011 SNAI2 JASPAR yes 118278996
chr1 42082003 42082008 USF2 TRANSFAC yes 28401625
chr1 42082003 42082008 USF2 TRANSFAC yes 118278997
chr1 42082010 42082016 SOX10 JASPAR yes 28401626
chr1 42082010 42082016 SOX10 JASPAR yes 118278998
chr1 42082013 42082033 TP53 JASPAR yes 28401627
chr1 42082013 42082033 TP53 JASPAR yes 118278999
chr1 42082015 42082035 TP63 JASPAR yes 28401628
chr1 42082015 42082035 TP63 JASPAR yes 118279000
chr1 42082016 42082034 TP53 JASPAR yes 28401629
chr1 42082016 42082034 TP63 JASPAR yes 28401630
chr1 42082016 42082034 TP73 JASPAR yes 28401631
chr1 42082016 42082034 TP53 JASPAR yes 118279001
chr1 42082016 42082034 TP63 JASPAR yes 118279002
chr1 42082016 42082034 TP73 JASPAR yes 118279003
chr1 42082017 42082032 TP53 JASPAR yes 28401632
chr1 42082017 42082032 TP53 JASPAR yes 118279004
chr1 42082018 42082033 TP53 JASPAR yes 28401633
chr1 42082018 42082033 TP53 JASPAR yes 118279005
chr1 42082022 42082032 NFIA JASPAR yes 28401634
chr1 42082022 42082032 NFIA JASPAR yes 118279006
chr1 42082023 42082032 NFIX JASPAR yes 28401635
chr1 42082023 42082032 NFIX JASPAR yes 118279007
chr1 42082024 42082030 NFIC JASPAR yes 28401636
chr1 42082024 42082030 NFIC JASPAR yes 118279008
chr1 42082034 42082038 YY1 TRANSFAC yes 28401637
chr1 42082034 42082038 YY1 TRANSFAC yes 118279009
chr1 42082038 42082052 MTF1 JASPAR yes 28401638
chr1 42082038 42082052 MTF1 JASPAR yes 118279010
chr1 42082053 42082057 NFE TRANSFAC yes 28401639
chr1 42082053 42082057 NFE TRANSFAC yes 118279011
chr1 42082054 42082059 GATA2 JASPAR yes 28401640
chr1 42082054 42082059 GATA2 JASPAR yes 118279012
chr1 42082093 42082098 H4TF1 TRANSFAC yes 28401641
chr1 42082093 42082098 H4TF1 TRANSFAC yes 118279013
chr1 42082143 42082149 NFIC JASPAR yes 28401642
chr1 42082143 42082149 NFIC JASPAR yes 118279014
chr1 42082145 42082156 ESRRA JASPAR yes 28401643
chr1 42082145 42082156 ESRRA JASPAR yes 118279015
chr1 42082168 42082172 YY1 TRANSFAC yes 28401644
chr1 42082168 42082172 YY1 TRANSFAC yes 118279016
chr1 42082183 42082191 EHF JASPAR yes 28401645
chr1 42082183 42082191 EHF JASPAR yes 118279017
chr1 42082185 42082190 ETS2 TRANSFAC yes 28401646
chr1 42082185 42082190 ETS2 TRANSFAC yes 118279018
SNP sites on vista1337[chr1:42081979-42082196]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42082012 rs186794111 C T
SOX10
263038
chr1 42082060 rs577804127 C T no 263039
chr1 42082117 rs117798989 G A no 263040
chr1 42082171 rs75263390 T A,C
YY1
263041
Genes possibly regulated by vista1337[chr1:42081979-42082196]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1337[chr1:42081979-42082196]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.19160432664987892 0.790987 0.676023 1312
Expression level of miRNAs
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