EnhancerDB
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  3. vista13370[chr12:50555629-50555991]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13370[chr12:50555629-50555991]
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Tissue distribution of vista13370
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Transcription factor that possibly regulate vista13370[chr12:50555629-50555991]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 50555619 50555634 AR JASPAR yes 82401629
chr12 50555619 50555634 AR JASPAR yes 120815655
chr12 50555640 50555661 IRF1 JASPAR yes 82401630
chr12 50555640 50555661 IRF1 JASPAR yes 120815656
chr12 50555643 50555657 SPI1 JASPAR yes 82401631
chr12 50555643 50555657 SPI1 JASPAR yes 120815657
chr12 50555643 50555664 IRF1 JASPAR yes 82401632
chr12 50555643 50555664 IRF1 JASPAR yes 120815658
chr12 50555646 50555660 SPI1 JASPAR yes 82401633
chr12 50555646 50555660 SPI1 JASPAR yes 120815659
chr12 50555646 50555667 IRF1 JASPAR yes 82401634
chr12 50555646 50555667 IRF1 JASPAR yes 120815660
chr12 50555647 50555668 IRF1 JASPAR yes 82401635
chr12 50555647 50555668 IRF1 JASPAR yes 120815661
chr12 50555648 50555669 IRF1 JASPAR yes 82401636
chr12 50555648 50555669 IRF1 JASPAR yes 120815662
chr12 50555649 50555664 FOXP1 JASPAR yes 82401637
chr12 50555649 50555664 FOXP1 JASPAR yes 120815663
chr12 50555649 50555670 IRF1 JASPAR yes 82401638
chr12 50555649 50555670 IRF1 JASPAR yes 120815664
chr12 50555650 50555671 IRF1 JASPAR yes 82401639
chr12 50555650 50555671 IRF1 JASPAR yes 120815665
chr12 50555651 50555666 FOXP1 JASPAR yes 82401640
chr12 50555651 50555666 FOXP1 JASPAR yes 120815666
chr12 50555651 50555672 IRF1 JASPAR yes 82401641
chr12 50555651 50555672 IRF1 JASPAR yes 120815667
chr12 50555652 50555667 FOXP1 JASPAR yes 82401642
chr12 50555652 50555667 FOXP1 JASPAR yes 120815668
chr12 50555652 50555673 IRF1 JASPAR yes 82401643
chr12 50555652 50555673 IRF1 JASPAR yes 120815669
chr12 50555653 50555668 FOXP1 JASPAR yes 82401644
chr12 50555653 50555668 FOXP1 JASPAR yes 120815670
chr12 50555653 50555674 IRF1 JASPAR yes 82401645
chr12 50555653 50555674 IRF1 JASPAR yes 120815671
chr12 50555654 50555669 FOXP1 JASPAR yes 82401646
chr12 50555654 50555669 FOXP1 JASPAR yes 120815672
chr12 50555654 50555675 IRF1 JASPAR yes 82401647
chr12 50555654 50555675 IRF1 JASPAR yes 120815673
chr12 50555655 50555670 FOXP1 JASPAR yes 82401648
chr12 50555655 50555670 FOXP1 JASPAR yes 120815674
chr12 50555655 50555676 IRF1 JASPAR yes 82401649
chr12 50555655 50555676 IRF1 JASPAR yes 120815675
chr12 50555656 50555671 FOXP1 JASPAR yes 82401650
chr12 50555656 50555671 FOXP1 JASPAR yes 120815676
chr12 50555657 50555672 FOXP1 JASPAR yes 82401651
chr12 50555657 50555672 FOXP1 JASPAR yes 120815677
chr12 50555658 50555673 FOXP1 JASPAR yes 82401652
chr12 50555658 50555673 FOXP1 JASPAR yes 120815678
chr12 50555659 50555674 FOXP1 JASPAR yes 82401653
chr12 50555659 50555674 FOXP1 JASPAR yes 120815679
chr12 50555660 50555675 FOXP1 JASPAR yes 82401654
chr12 50555660 50555675 FOXP1 JASPAR yes 120815680
chr12 50555661 50555676 FOXP1 JASPAR yes 82401655
chr12 50555661 50555676 FOXP1 JASPAR yes 120815681
chr12 50555662 50555677 FOXP1 JASPAR yes 82401656
chr12 50555662 50555677 FOXP1 JASPAR yes 120815682
chr12 50555663 50555678 FOXP1 JASPAR yes 82401657
chr12 50555663 50555678 FOXP1 JASPAR yes 120815683
chr12 50555683 50555702 PAX5 JASPAR yes 82401658
chr12 50555683 50555702 PAX5 JASPAR yes 120815684
chr12 50555723 50555733 SREBF1 JASPAR yes 82401659
chr12 50555723 50555733 SREBF1 JASPAR yes 120815685
chr12 50555724 50555742 ESR1 JASPAR yes 82401660
chr12 50555724 50555742 ESR1 JASPAR yes 120815686
chr12 50555725 50555742 ESR1 JASPAR yes 82401661
chr12 50555725 50555742 ESR1 JASPAR yes 120815687
chr12 50555729 50555738 RUNX2 JASPAR yes 82401662
chr12 50555729 50555738 RUNX2 JASPAR yes 120815688
chr12 50555827 50555842 MEF2A JASPAR yes 82401663
chr12 50555827 50555842 MEF2A JASPAR yes 120815689
chr12 50555828 50555843 MEF2C JASPAR yes 82401664
chr12 50555828 50555843 MEF2C JASPAR yes 120815690
chr12 50555829 50555841 MEF2A JASPAR yes 82401665
chr12 50555829 50555841 MEF2B JASPAR yes 82401666
chr12 50555829 50555841 MEF2D JASPAR yes 82401667
chr12 50555829 50555841 MEF2A JASPAR yes 120815691
chr12 50555829 50555841 MEF2B JASPAR yes 120815692
chr12 50555829 50555841 MEF2D JASPAR yes 120815693
chr12 50555831 50555835 YY1 TRANSFAC yes 82401668
chr12 50555831 50555835 YY1 TRANSFAC yes 120815694
chr12 50555849 50555860 CEBPB JASPAR yes 82401669
chr12 50555849 50555860 CEBPB JASPAR yes 120815695
chr12 50555852 50555864 YY1 JASPAR yes 82401670
chr12 50555852 50555864 YY1 JASPAR yes 120815696
chr12 50555874 50555892 RARA JASPAR yes 82401671
chr12 50555874 50555892 RARA JASPAR yes 120815697
chr12 50555881 50555894 NR2F1 JASPAR yes 82401672
chr12 50555881 50555894 NR2F1 JASPAR yes 120815698
chr12 50555885 50555893 CREB1 JASPAR yes 82401673
chr12 50555885 50555893 CREB1 JASPAR yes 120815699
chr12 50555893 50555902 PITX3 JASPAR yes 82401674
chr12 50555893 50555902 PITX3 JASPAR yes 120815700
chr12 50555893 50555903 GSC JASPAR yes 82401675
chr12 50555893 50555903 GSC JASPAR yes 120815701
chr12 50555894 50555902 RHOXF1 JASPAR yes 82401676
chr12 50555894 50555902 RHOXF1 JASPAR yes 120815702
chr12 50555897 50555903 ZNF354C JASPAR yes 82401677
chr12 50555897 50555903 ZNF354C JASPAR yes 120815703
chr12 50555898 50555908 ID4 JASPAR yes 82401678
chr12 50555898 50555908 ID4 JASPAR yes 120815704
chr12 50555899 50555908 SNAI2 JASPAR yes 82401679
chr12 50555899 50555908 SNAI2 JASPAR yes 120815705
chr12 50555900 50555905 USF2 TRANSFAC yes 82401680
chr12 50555900 50555905 USF2 TRANSFAC yes 120815706
chr12 50555907 50555914 E2F1 TRANSFAC yes 82401681
chr12 50555907 50555914 E2F1 TRANSFAC yes 120815707
chr12 50555934 50555954 TP63 JASPAR yes 82401682
chr12 50555934 50555954 TP63 JASPAR yes 120815708
chr12 50555937 50555948 NFE2 JASPAR yes 82401683
chr12 50555937 50555948 NFE2 JASPAR yes 120815709
chr12 50555938 50555949 FOSL2 JASPAR yes 82401684
chr12 50555938 50555949 FOSL2 JASPAR yes 120815710
chr12 50555945 50555964 PAX5 JASPAR yes 82401685
chr12 50555945 50555964 PAX5 JASPAR yes 120815711
chr12 50555958 50555979 IRF1 JASPAR yes 82401686
chr12 50555958 50555979 IRF1 JASPAR yes 120815712
chr12 50555961 50555982 IRF1 JASPAR yes 82401687
chr12 50555961 50555982 IRF1 JASPAR yes 120815713
chr12 50555962 50555983 IRF1 JASPAR yes 82401688
chr12 50555962 50555983 IRF1 JASPAR yes 120815714
chr12 50555963 50555984 IRF1 JASPAR yes 82401689
chr12 50555963 50555984 IRF1 JASPAR yes 120815715
chr12 50555964 50555979 FOXP1 JASPAR yes 82401690
chr12 50555964 50555979 FOXP1 JASPAR yes 120815716
chr12 50555964 50555985 IRF1 JASPAR yes 82401691
chr12 50555964 50555985 IRF1 JASPAR yes 120815717
chr12 50555965 50555986 IRF1 JASPAR yes 82401692
chr12 50555965 50555986 IRF1 JASPAR yes 120815718
chr12 50555966 50555981 FOXP1 JASPAR yes 82401693
chr12 50555966 50555981 FOXP1 JASPAR yes 120815719
chr12 50555966 50555987 IRF1 JASPAR yes 82401694
chr12 50555966 50555987 IRF1 JASPAR yes 120815720
chr12 50555967 50555982 FOXP1 JASPAR yes 82401695
chr12 50555967 50555982 FOXP1 JASPAR yes 120815721
chr12 50555967 50555988 IRF1 JASPAR yes 82401696
chr12 50555967 50555988 IRF1 JASPAR yes 120815722
chr12 50555968 50555983 FOXP1 JASPAR yes 82401697
chr12 50555968 50555983 FOXP1 JASPAR yes 120815723
chr12 50555968 50555989 IRF1 JASPAR yes 82401698
chr12 50555968 50555989 IRF1 JASPAR yes 120815724
chr12 50555969 50555984 FOXP1 JASPAR yes 82401699
chr12 50555969 50555984 FOXP1 JASPAR yes 120815725
chr12 50555969 50555990 IRF1 JASPAR yes 82401700
chr12 50555969 50555990 IRF1 JASPAR yes 120815726
chr12 50555970 50555985 FOXP1 JASPAR yes 82401701
chr12 50555970 50555985 FOXP1 JASPAR yes 120815727
chr12 50555971 50555986 FOXP1 JASPAR yes 82401702
chr12 50555971 50555986 FOXP1 JASPAR yes 120815728
chr12 50555972 50555987 FOXP1 JASPAR yes 82401703
chr12 50555972 50555987 FOXP1 JASPAR yes 120815729
chr12 50555973 50555988 FOXP1 JASPAR yes 82401704
chr12 50555973 50555988 FOXP1 JASPAR yes 120815730
chr12 50555974 50555989 FOXP1 JASPAR yes 82401705
chr12 50555974 50555989 FOXP1 JASPAR yes 120815731
chr12 50555975 50555990 FOXP1 JASPAR yes 82401706
chr12 50555975 50555990 FOXP1 JASPAR yes 120815732
chr12 50555976 50555991 FOXP1 JASPAR yes 82401707
chr12 50555976 50555991 FOXP1 JASPAR yes 120815733
chr12 50555977 50555992 FOXP1 JASPAR yes 82401708
chr12 50555977 50555992 FOXP1 JASPAR yes 120815734
chr12 50555989 50556002 POU2F2 JASPAR yes 82401709
chr12 50555989 50556002 POU2F2 JASPAR yes 120815735
SNP sites on vista13370[chr12:50555629-50555991]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 50555699 rs138010766 C T
PAX5
2625030
chr12 50555709 rs189182915 G A no 2625031
chr12 50555759 rs192396806 G A no 2625032
chr12 50555840 rs141008098 G A
MEF2A MEF2B MEF2C MEF2D
2625033
chr12 50555939 rs10783339 A G
FOSL2 NFE2 TP63
2625034
chr12 50555952 rs184252410 C T
PAX5 TP63
2625035
chr12 50555967 rs199869770 CTTTTTTTTT C
FOXP1 IRF1
2625036
chr12 50555990 rs556972723 A T
FOXP1 IRF1 POU2F2
2625037
Genes possibly regulated by vista13370[chr12:50555629-50555991]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 50478755 50494495 + SMARCD1 ENSG00000066117.10 50478755 0.78 0.99 12045 23126
chr12 50497602 50505102 + GPD1 ENSG00000167588.8 50497602 0.96 0.98 12046 41973
chr12 50505762 50514240 + COX14 ENSG00000178449.4 50505762 0.63 0.98 12047 50133
chr12 50523575 50561288 - CERS5 ENSG00000139624.8 50561288 0.72 1.0 12048 94703
Expression level of Genes
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miRNAs possibly regulated by vista13370[chr12:50555629-50555991]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results