EnhancerDB
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  3. vista13451[chr12:52571070-52571435]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13451[chr12:52571070-52571435]
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Tissue distribution of vista13451
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Transcription factor that possibly regulate vista13451[chr12:52571070-52571435]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 52571078 52571082 LFA1 TRANSFAC yes 82405948
chr12 52571078 52571082 LFA1 TRANSFAC yes 120925184
chr12 52571087 52571100 POU2F2 JASPAR yes 82405949
chr12 52571087 52571100 POU2F2 JASPAR yes 120925185
chr12 52571131 52571145 GLIS2 JASPAR yes 82405950
chr12 52571131 52571145 GLIS3 JASPAR yes 82405951
chr12 52571131 52571145 GLIS2 JASPAR yes 120925186
chr12 52571131 52571145 GLIS3 JASPAR yes 120925187
chr12 52571151 52571166 ZIC3 JASPAR yes 82405952
chr12 52571151 52571166 ZIC4 JASPAR yes 82405953
chr12 52571151 52571166 ZIC3 JASPAR yes 120925188
chr12 52571151 52571166 ZIC4 JASPAR yes 120925189
chr12 52571152 52571166 GLIS2 JASPAR yes 82405954
chr12 52571152 52571166 ZIC1 JASPAR yes 82405955
chr12 52571152 52571166 GLIS2 JASPAR yes 120925190
chr12 52571152 52571166 ZIC1 JASPAR yes 120925191
chr12 52571162 52571177 MAFK JASPAR yes 82405956
chr12 52571162 52571177 MAFK JASPAR yes 120925192
chr12 52571166 52571177 NRL JASPAR yes 82405957
chr12 52571166 52571177 NRL JASPAR yes 120925193
chr12 52571171 52571182 FOXH1 JASPAR yes 82405958
chr12 52571171 52571182 FOXH1 JASPAR yes 120925194
chr12 52571171 52571183 TEAD1 JASPAR yes 82405959
chr12 52571171 52571183 TEAD1 JASPAR yes 120925195
chr12 52571188 52571203 TFAP2C JASPAR yes 82405960
chr12 52571188 52571203 TFAP2C JASPAR yes 120925196
chr12 52571189 52571200 EBF1 JASPAR yes 82405961
chr12 52571189 52571200 EBF1 JASPAR yes 120925197
chr12 52571200 52571215 NR2C2 JASPAR yes 82405962
chr12 52571200 52571215 NR2C2 JASPAR yes 120925198
chr12 52571201 52571215 NR2F1 JASPAR yes 82405963
chr12 52571201 52571215 RXRG JASPAR yes 82405964
chr12 52571201 52571215 NR2F1 JASPAR yes 120925199
chr12 52571201 52571215 RXRG JASPAR yes 120925200
chr12 52571209 52571226 RARA JASPAR yes 82405965
chr12 52571209 52571226 RXRA JASPAR yes 82405966
chr12 52571209 52571226 RARA JASPAR yes 120925201
chr12 52571209 52571226 RXRA JASPAR yes 120925202
chr12 52571210 52571214 ESR1 TRANSFAC yes 82405967
chr12 52571210 52571214 ESR1 TRANSFAC yes 120925203
chr12 52571223 52571231 TEAD3 JASPAR yes 82405968
chr12 52571223 52571231 TEAD3 JASPAR yes 120925204
chr12 52571244 52571256 INSM1 JASPAR yes 82405969
chr12 52571244 52571256 INSM1 JASPAR yes 120925205
chr12 52571251 52571257 HiNF-A TRANSFAC yes 82405970
chr12 52571251 52571257 HiNF-A TRANSFAC yes 120925206
chr12 52571292 52571307 HSF1 JASPAR yes 82405971
chr12 52571292 52571307 HSF1 JASPAR yes 120925207
chr12 52571293 52571306 HSF1 JASPAR yes 82405972
chr12 52571293 52571306 HSF4 JASPAR yes 82405973
chr12 52571293 52571306 HSF1 JASPAR yes 120925208
chr12 52571293 52571306 HSF4 JASPAR yes 120925209
chr12 52571306 52571321 TFAP2A JASPAR yes 82405974
chr12 52571306 52571321 TFAP2C JASPAR yes 82405975
chr12 52571306 52571321 TFAP2A JASPAR yes 120925210
chr12 52571306 52571321 TFAP2C JASPAR yes 120925211
chr12 52571308 52571320 TFAP2A JASPAR yes 82405976
chr12 52571308 52571320 TFAP2B JASPAR yes 82405977
chr12 52571308 52571320 TFAP2C JASPAR yes 82405978
chr12 52571308 52571320 TFAP2A JASPAR yes 120925212
chr12 52571308 52571320 TFAP2B JASPAR yes 120925213
chr12 52571308 52571320 TFAP2C JASPAR yes 120925214
chr12 52571308 52571321 TFAP2A JASPAR yes 82405979
chr12 52571308 52571321 TFAP2B JASPAR yes 82405980
chr12 52571308 52571321 TFAP2C JASPAR yes 82405981
chr12 52571308 52571321 TFAP2A JASPAR yes 120925215
chr12 52571308 52571321 TFAP2B JASPAR yes 120925216
chr12 52571308 52571321 TFAP2C JASPAR yes 120925217
chr12 52571308 52571322 GLIS2 JASPAR yes 82405982
chr12 52571308 52571322 GLIS2 JASPAR yes 120925218
chr12 52571308 52571323 TFAP2A JASPAR yes 82405983
chr12 52571308 52571323 TFAP2A JASPAR yes 120925219
chr12 52571309 52571320 EBF1 JASPAR yes 82405984
chr12 52571309 52571320 EBF1 JASPAR yes 120925220
chr12 52571309 52571323 EBF1 JASPAR yes 82405985
chr12 52571309 52571323 EBF1 JASPAR yes 120925221
chr12 52571311 52571322 EBF1 JASPAR yes 82405986
chr12 52571311 52571322 EBF1 JASPAR yes 120925222
chr12 52571317 52571330 SMAD2 JASPAR yes 82405987
chr12 52571317 52571330 SMAD2 JASPAR yes 120925223
chr12 52571381 52571386 MYC TRANSFAC yes 82405988
chr12 52571381 52571386 MYC TRANSFAC yes 120925224
chr12 52571406 52571417 DMRT3 JASPAR yes 82405989
chr12 52571406 52571417 DMRT3 JASPAR yes 120925225
chr12 52571409 52571414 GATA1 TRANSFAC yes 82405990
chr12 52571409 52571414 GATA1 TRANSFAC yes 120925226
chr12 52571415 52571435 RREB1 JASPAR yes 82405991
chr12 52571415 52571435 RREB1 JASPAR yes 120925227
chr12 52571417 52571437 RREB1 JASPAR yes 82405992
chr12 52571417 52571437 RREB1 JASPAR yes 120925228
chr12 52571419 52571439 RREB1 JASPAR yes 82405993
chr12 52571419 52571439 RREB1 JASPAR yes 120925229
chr12 52571421 52571441 RREB1 JASPAR yes 82405994
chr12 52571421 52571441 RREB1 JASPAR yes 120925230
chr12 52571423 52571443 RREB1 JASPAR yes 82405995
chr12 52571423 52571443 RREB1 JASPAR yes 120925231
chr12 52571425 52571445 RREB1 JASPAR yes 82405996
chr12 52571425 52571445 RREB1 JASPAR yes 120925232
chr12 52571427 52571447 RREB1 JASPAR yes 82405997
chr12 52571427 52571447 RREB1 JASPAR yes 120925233
chr12 52571429 52571449 RREB1 JASPAR yes 82405998
chr12 52571429 52571449 RREB1 JASPAR yes 120925234
SNP sites on vista13451[chr12:52571070-52571435]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 52571078 rs118112204 G A
LFA1
2636407
chr12 52571124 rs116474157 C T no 2636408
chr12 52571173 rs75791321 A G
FOXH1 MAFK NRL TEAD1
2636409
chr12 52571236 rs529406105 G C no 2636410
chr12 52571313 rs80246701 C G,T
EBF1 GLIS2 TFAP2A TFAP2B TFAP2C
2636411
chr12 52571419 rs34730614 CTGTG C
RREB1
2636412
chr12 52571419 rs60832761 CTGTG C
RREB1
2636413
Genes possibly regulated by vista13451[chr12:52571070-52571435]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 52562780 52585784 - KRT80 ENSG00000167767.9 52585784 0.93 0.99 12078 85651
chr12 52626304 52645970 + KRT7 ENSG00000135480.10 52626304 0.9 0.99 12079 45131
chr12 52643084 52702947 + KRT86 ENSG00000170442.7 52643084 0.88 0.98 12080 28351
Expression level of Genes
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miRNAs possibly regulated by vista13451[chr12:52571070-52571435]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results