EnhancerDB
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  3. vista13460[chr12:52591671-52592071]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13460[chr12:52591671-52592071]
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Tissue distribution of vista13460
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Transcription factor that possibly regulate vista13460[chr12:52591671-52592071]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 52591625 52591949 CEBPB UCSC Txn Factor no Conserved 108033564
chr12 52591685 52591697 GLI2 JASPAR yes 82406262
chr12 52591685 52591697 GLI2 JASPAR yes 120926629
chr12 52591696 52591702 LEF1 TRANSFAC yes 82406263
chr12 52591696 52591702 SOX10 JASPAR yes 82406264
chr12 52591696 52591702 LEF1 TRANSFAC yes 120926630
chr12 52591696 52591702 SOX10 JASPAR yes 120926631
chr12 52591714 52591718 H1TF2 TRANSFAC yes 82406265
chr12 52591714 52591718 NFE TRANSFAC yes 82406266
chr12 52591714 52591718 SRF TRANSFAC yes 82406267
chr12 52591714 52591718 H1TF2 TRANSFAC yes 120926632
chr12 52591714 52591718 NFE TRANSFAC yes 120926633
chr12 52591714 52591718 SRF TRANSFAC yes 120926634
chr12 52591721 52591735 TLX1 JASPAR yes 82406268
chr12 52591721 52591735 TLX1 JASPAR yes 120926635
chr12 52591729 52591742 SMAD2 JASPAR yes 82406269
chr12 52591729 52591742 SMAD2 JASPAR yes 120926636
chr12 52591757 52591760 MYB TRANSFAC yes 82406270
chr12 52591757 52591760 MYB TRANSFAC yes 120926637
chr12 52591761 52591765 YY1 TRANSFAC yes 82406271
chr12 52591761 52591765 YY1 TRANSFAC yes 120926638
chr12 52591776 52591782 JUN TRANSFAC yes 82406272
chr12 52591776 52591782 JUN TRANSFAC yes 120926639
chr12 52591790 52591800 SP1 JASPAR yes 82406273
chr12 52591790 52591800 SP1 JASPAR yes 120926640
chr12 52591791 52591799 EHF JASPAR yes 82406274
chr12 52591791 52591799 EHF JASPAR yes 120926641
chr12 52591803 52591819 ZNF143 JASPAR yes 82406275
chr12 52591803 52591819 ZNF143 JASPAR yes 120926642
chr12 52591819 52591824 H4TF1 TRANSFAC yes 82406276
chr12 52591819 52591824 H4TF1 TRANSFAC yes 120926643
chr12 52591819 52591830 CEBPB JASPAR yes 82406277
chr12 52591819 52591830 CEBPB JASPAR yes 120926644
chr12 52591820 52591831 CEBPA JASPAR yes 82406278
chr12 52591820 52591831 CEBPA JASPAR yes 120926645
chr12 52591836 52591845 RUNX2 JASPAR yes 82406279
chr12 52591836 52591845 RUNX2 JASPAR yes 120926646
chr12 52591836 52591846 RUNX3 JASPAR yes 82406280
chr12 52591836 52591846 RUNX3 JASPAR yes 120926647
chr12 52591861 52591879 ESR1 JASPAR yes 82406281
chr12 52591861 52591879 ESR1 JASPAR yes 120926648
chr12 52591865 52591876 NFE2L2 JASPAR yes 82406282
chr12 52591865 52591876 NFE2L2 JASPAR yes 120926649
chr12 52591879 52591890 FLI1 JASPAR yes 82406283
chr12 52591879 52591890 FLI1 JASPAR yes 120926650
chr12 52591880 52591887 PEA3 TRANSFAC yes 82406284
chr12 52591880 52591887 PEA3 TRANSFAC yes 120926651
chr12 52591890 52591895 ETS2 TRANSFAC yes 82406285
chr12 52591890 52591895 ETS2 TRANSFAC yes 120926652
chr12 52591890 52591898 FEV JASPAR yes 82406286
chr12 52591890 52591898 FEV JASPAR yes 120926653
chr12 52591891 52591898 SPI1 JASPAR yes 82406287
chr12 52591891 52591898 SPI1 JASPAR yes 120926654
chr12 52591903 52591916 NFKB2 JASPAR yes 82406288
chr12 52591903 52591916 NFKB2 JASPAR yes 120926655
chr12 52591931 52591951 PPARG JASPAR yes 82406289
chr12 52591931 52591951 PPARG JASPAR yes 120926656
chr12 52591935 52591940 SP1 TRANSFAC yes 82406290
chr12 52591935 52591940 SP1 TRANSFAC yes 120926657
chr12 52591939 52591949 SP1 JASPAR yes 82406291
chr12 52591939 52591949 SP1 JASPAR yes 120926658
chr12 52591942 52591948 NFE2 TRANSFAC yes 82406292
chr12 52591942 52591948 NFE2 TRANSFAC yes 120926659
chr12 52591975 52591989 JUN JASPAR yes 82406293
chr12 52591975 52591989 JUN JASPAR yes 120926660
chr12 52591977 52591988 BATF JASPAR yes 82406294
chr12 52591977 52591988 BATF JASPAR yes 120926661
chr12 52591978 52591989 FOSL2 JASPAR yes 82406295
chr12 52591978 52591989 JUNB JASPAR yes 82406296
chr12 52591978 52591989 FOSL2 JASPAR yes 120926662
chr12 52591978 52591989 JUNB JASPAR yes 120926663
chr12 52591979 52591990 FOS JASPAR yes 82406297
chr12 52591979 52591990 FOSL1 JASPAR yes 82406298
chr12 52591979 52591990 JUND JASPAR yes 82406299
chr12 52591979 52591990 NFE2 JASPAR yes 82406300
chr12 52591979 52591990 FOS JASPAR yes 120926664
chr12 52591979 52591990 FOSL1 JASPAR yes 120926665
chr12 52591979 52591990 JUND JASPAR yes 120926666
chr12 52591979 52591990 NFE2 JASPAR yes 120926667
chr12 52591980 52591989 JDP2 JASPAR yes 82406301
chr12 52591980 52591989 JDP2 JASPAR yes 120926668
chr12 52591980 52591991 FOSL2 JASPAR yes 82406302
chr12 52591980 52591991 JUNB JASPAR yes 82406303
chr12 52591980 52591991 FOSL2 JASPAR yes 120926669
chr12 52591980 52591991 JUNB JASPAR yes 120926670
chr12 52591980 52591994 JUN JASPAR yes 82406304
chr12 52591980 52591994 JUN JASPAR yes 120926671
chr12 52591982 52591997 SCRT1 JASPAR yes 82406305
chr12 52591982 52591997 SCRT1 JASPAR yes 120926672
chr12 52592001 52592005 H4TF2 TRANSFAC yes 82406306
chr12 52592001 52592005 H4TF2 TRANSFAC yes 120926673
chr12 52592015 52592028 SMAD2 JASPAR yes 82406307
chr12 52592015 52592028 SMAD2 JASPAR yes 120926674
chr12 52592015 52592033 ESR1 JASPAR yes 82406308
chr12 52592015 52592033 ESR1 JASPAR yes 120926675
chr12 52592017 52592037 ESR1 JASPAR yes 82406309
chr12 52592017 52592037 ESR1 JASPAR yes 120926676
chr12 52592025 52592037 ZBTB7C JASPAR yes 82406310
chr12 52592025 52592037 ZBTB7C JASPAR yes 120926677
chr12 52592030 52592041 YY2 JASPAR yes 82406311
chr12 52592030 52592041 YY2 JASPAR yes 120926678
chr12 52592036 52592040 YY1 TRANSFAC yes 82406312
chr12 52592036 52592040 YY1 TRANSFAC yes 120926679
SNP sites on vista13460[chr12:52591671-52592071]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 52591689 rs4762067 T G
CEBPB GLI2
2636671
chr12 52591804 rs4762068 C T
CEBPB ZNF143
2636672
chr12 52591840 rs11170038 C T
CEBPB RUNX2 RUNX3
2636673
chr12 52591916 rs4762069 C A
CEBPB NFKB2
2636674
Genes possibly regulated by vista13460[chr12:52591671-52592071]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 52562780 52585784 - KRT80 ENSG00000167767.9 52585784 0.93 0.99 12078 94113
chr12 52626304 52645970 + KRT7 ENSG00000135480.10 52626304 0.9 0.99 12079 65767
chr12 52643084 52702947 + KRT86 ENSG00000170442.7 52643084 0.88 0.98 12080 48987
chr12 52679697 52685318 - KRT81 ENSG00000205426.6 52685318 0.94 0.97 12081 6753
Expression level of Genes
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miRNAs possibly regulated by vista13460[chr12:52591671-52592071]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results