EnhancerDB
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  3. vista13473[chr12:52674655-52675081]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13473[chr12:52674655-52675081]
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Tissue distribution of vista13473
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Transcription factor that possibly regulate vista13473[chr12:52674655-52675081]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033834
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033835
chr12 52673893 52675243 EP300 UCSC Txn Factor no Conserved 108033839
chr12 52673893 52675243 EP300 UCSC Txn Factor no Conserved 108033840
chr12 52673977 52675174 TCF12 UCSC Txn Factor no Conserved 108033846
chr12 52673977 52675174 TCF12 UCSC Txn Factor no Conserved 108033847
chr12 52674024 52675038 BCL3 UCSC Txn Factor no Conserved 108033856
chr12 52674024 52675038 BCL3 UCSC Txn Factor no Conserved 108033857
chr12 52674048 52675273 TCF7L2 UCSC Txn Factor no Conserved 108033864
chr12 52674048 52675273 TCF7L2 UCSC Txn Factor no Conserved 108033865
chr12 52674882 52675074 TBP UCSC Txn Factor no Conserved 108033965
chr12 52674647 52674655 FOXO3 JASPAR yes 82407142
chr12 52674647 52674655 FOXO3 JASPAR yes 120934324
chr12 52674660 52674666 SOX10 JASPAR yes 82407143
chr12 52674660 52674666 SOX10 JASPAR yes 120934325
chr12 52674706 52674712 ATF1 TRANSFAC yes 82407144
chr12 52674706 52674712 ATF1 TRANSFAC yes 120934326
chr12 52674706 52674718 CREB1 JASPAR yes 82407145
chr12 52674706 52674718 CREB1 JASPAR yes 120934327
chr12 52674729 52674744 PRDM1 JASPAR yes 82407146
chr12 52674729 52674744 PRDM1 JASPAR yes 120934328
chr12 52674730 52674734 YY1 TRANSFAC yes 82407147
chr12 52674730 52674734 YY1 TRANSFAC yes 120934329
chr12 52674730 52674744 STAT1 JASPAR yes 82407148
chr12 52674730 52674744 STAT1 JASPAR yes 120934330
chr12 52674762 52674774 PKNOX2 JASPAR yes 82407149
chr12 52674762 52674774 PKNOX2 JASPAR yes 120934331
chr12 52674774 52674787 HSF2 JASPAR yes 82407150
chr12 52674774 52674787 HSF2 JASPAR yes 120934332
chr12 52674778 52674789 NFKB1 JASPAR yes 82407151
chr12 52674778 52674789 NFKB1 JASPAR yes 120934333
chr12 52674780 52674795 TFAP2A JASPAR yes 82407152
chr12 52674780 52674795 TFAP2C JASPAR yes 82407153
chr12 52674780 52674795 TFAP2A JASPAR yes 120934334
chr12 52674780 52674795 TFAP2C JASPAR yes 120934335
chr12 52674783 52674794 EBF1 JASPAR yes 82407154
chr12 52674783 52674794 EBF1 JASPAR yes 120934336
chr12 52674784 52674790 MZF1 JASPAR yes 82407155
chr12 52674784 52674790 MZF1 JASPAR yes 120934337
chr12 52674785 52674794 TFAP2A JASPAR yes 82407156
chr12 52674785 52674794 TFAP2A JASPAR yes 120934338
chr12 52674799 52674803 ESR1 TRANSFAC yes 82407157
chr12 52674799 52674803 ESR1 TRANSFAC yes 120934339
chr12 52674803 52674817 STAT1 JASPAR yes 82407158
chr12 52674803 52674817 STAT1 JASPAR yes 120934340
chr12 52674804 52674816 IRF1 JASPAR yes 82407159
chr12 52674804 52674816 IRF1 JASPAR yes 120934341
chr12 52674813 52674826 ELF1 JASPAR yes 82407160
chr12 52674813 52674826 ELF1 JASPAR yes 120934342
chr12 52674834 52674840 ZNF354C JASPAR yes 82407161
chr12 52674834 52674840 ZNF354C JASPAR yes 120934343
chr12 52674844 52674859 SOX21 JASPAR yes 82407162
chr12 52674844 52674859 SOX21 JASPAR yes 120934344
chr12 52674845 52674865 RREB1 JASPAR yes 82407163
chr12 52674845 52674865 RREB1 JASPAR yes 120934345
chr12 52674847 52674862 RUNX2 JASPAR yes 82407164
chr12 52674847 52674862 RUNX2 JASPAR yes 120934346
chr12 52674850 52674861 RUNX1 JASPAR yes 82407165
chr12 52674850 52674861 RUNX1 JASPAR yes 120934347
chr12 52674851 52674861 RUNX3 JASPAR yes 82407166
chr12 52674851 52674861 RUNX3 JASPAR yes 120934348
chr12 52674852 52674861 RUNX2 JASPAR yes 82407167
chr12 52674852 52674861 RUNX2 JASPAR yes 120934349
chr12 52674887 52674901 TLX1 JASPAR yes 82407168
chr12 52674887 52674901 TLX1 JASPAR yes 120934350
chr12 52674899 52674909 TEAD1 JASPAR yes 82407169
chr12 52674899 52674909 TEAD4 JASPAR yes 82407170
chr12 52674899 52674909 TEAD1 JASPAR yes 120934351
chr12 52674899 52674909 TEAD4 JASPAR yes 120934352
chr12 52674899 52674911 TEAD1 JASPAR yes 82407171
chr12 52674899 52674911 TEAD1 JASPAR yes 120934353
chr12 52674900 52674908 TEAD3 JASPAR yes 82407172
chr12 52674900 52674908 TEAD3 JASPAR yes 120934354
chr12 52674913 52674924 E2F6 JASPAR yes 82407173
chr12 52674913 52674924 E2F6 JASPAR yes 120934355
chr12 52674914 52674919 SP1 TRANSFAC yes 82407174
chr12 52674914 52674919 SP1 TRANSFAC yes 120934356
chr12 52674918 52674924 PEA3 TRANSFAC yes 82407175
chr12 52674918 52674924 PEA3 TRANSFAC yes 120934357
chr12 52674936 52674940 YY1 TRANSFAC yes 82407176
chr12 52674936 52674940 YY1 TRANSFAC yes 120934358
chr12 52674945 52674956 BATF JASPAR yes 82407177
chr12 52674945 52674956 BATF JASPAR yes 120934359
chr12 52674953 52674959 MZF1 JASPAR yes 82407178
chr12 52674953 52674959 MZF1 JASPAR yes 120934360
chr12 52674962 52674966 YY1 TRANSFAC yes 82407179
chr12 52674962 52674966 YY1 TRANSFAC yes 120934361
chr12 52674966 52674970 TEAD2 TRANSFAC yes 82407180
chr12 52674966 52674970 TEAD2 TRANSFAC yes 120934362
chr12 52674972 52674978 SOX10 JASPAR yes 82407181
chr12 52674972 52674978 SOX10 JASPAR yes 120934363
chr12 52674999 52675006 CEBPA TRANSFAC yes 82407182
chr12 52674999 52675006 CEBPA TRANSFAC yes 120934364
chr12 52675007 52675011 NFE TRANSFAC yes 82407183
chr12 52675007 52675011 NFE TRANSFAC yes 120934365
chr12 52675028 52675039 STAT3 JASPAR yes 82407184
chr12 52675028 52675039 STAT3 JASPAR yes 120934366
chr12 52675040 52675057 RARA JASPAR yes 82407185
chr12 52675040 52675057 RARA JASPAR yes 120934367
chr12 52675041 52675045 LFA1 TRANSFAC yes 82407186
chr12 52675041 52675045 LFA1 TRANSFAC yes 120934368
chr12 52675047 52675051 TEAD2 TRANSFAC yes 82407187
chr12 52675047 52675051 TEAD2 TRANSFAC yes 120934369
chr12 52675050 52675060 TBX21 JASPAR yes 82407188
chr12 52675050 52675060 TBX21 JASPAR yes 120934370
chr12 52675050 52675061 TBX20 JASPAR yes 82407189
chr12 52675050 52675061 TBX2 JASPAR yes 82407190
chr12 52675050 52675061 TBX20 JASPAR yes 120934371
chr12 52675050 52675061 TBX2 JASPAR yes 120934372
chr12 52675050 52675063 EOMES JASPAR yes 82407191
chr12 52675050 52675063 EOMES JASPAR yes 120934373
chr12 52675051 52675059 MGA JASPAR yes 82407192
chr12 52675051 52675059 TBX15 JASPAR yes 82407193
chr12 52675051 52675059 TBX1 JASPAR yes 82407194
chr12 52675051 52675059 TBX4 JASPAR yes 82407195
chr12 52675051 52675059 TBX5 JASPAR yes 82407196
chr12 52675051 52675059 MGA JASPAR yes 120934374
chr12 52675051 52675059 TBX15 JASPAR yes 120934375
chr12 52675051 52675059 TBX1 JASPAR yes 120934376
chr12 52675051 52675059 TBX4 JASPAR yes 120934377
chr12 52675051 52675059 TBX5 JASPAR yes 120934378
chr12 52675051 52675061 TBR1 JASPAR yes 82407197
chr12 52675051 52675061 TBR1 JASPAR yes 120934379
chr12 52675061 52675076 FOXA1 JASPAR yes 82407198
chr12 52675061 52675076 FOXA1 JASPAR yes 120934380
chr12 52675065 52675076 FOXA1 JASPAR yes 82407199
chr12 52675065 52675076 FOXA1 JASPAR yes 120934381
chr12 52675081 52675094 SMAD2 JASPAR yes 82407200
chr12 52675081 52675094 SMAD2 JASPAR yes 120934382
SNP sites on vista13473[chr12:52674655-52675081]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 52674700 rs139613677 T A
BCL3 EP300 POLR2A TCF12 TCF7L2
2637742
chr12 52674709 rs10495312 C T
ATF1 BCL3 CREB1 EP300 POLR2A TCF12 TCF7L2
2637743
chr12 52674794 rs142646375 CT C
BCL3 EBF1 EP300 POLR2A TCF12 TCF7L2 TFAP2A TFAP2C
2637744
chr12 52675025 rs17126563 A G
BCL3 EP300 POLR2A TBP TCF12 TCF7L2
2637745
chr12 52675034 rs949390 C T
BCL3 EP300 POLR2A STAT3 TBP TCF12 TCF7L2
2637746
chr12 52675046 rs148391980 A G
EP300 POLR2A RARA TBP TCF12 TCF7L2
2637747
chr12 52675051 rs10876259 A G
EOMES EP300 MGA POLR2A RARA TBP TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5 TCF12 TCF7L2 TEAD2
2637748
Genes possibly regulated by vista13473[chr12:52674655-52675081]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 52562780 52585784 - KRT80 ENSG00000167767.9 52585784 0.93 0.99 12078 11129
chr12 52626304 52645970 + KRT7 ENSG00000135480.10 52626304 0.9 0.99 12079 51649
chr12 52643084 52702947 + KRT86 ENSG00000170442.7 52643084 0.88 0.98 12080 68429
chr12 52679697 52685318 - KRT81 ENSG00000205426.6 52685318 0.94 0.97 12081 89763
chr12 52708085 52715182 - KRT83 ENSG00000170523.3 52715182 0.99 0.98 12082 59899
chr12 52709128 52709790 + AC121757.1 ENSG00000267873.1 52709128 0.0 0.0 12083 65953
chr12 52753790 52761265 - KRT85 ENSG00000135443.4 52761265 0.83 1.0 12084 13816
Expression level of Genes
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miRNAs possibly regulated by vista13473[chr12:52674655-52675081]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results