EnhancerDB
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  3. vista13476[chr12:52835077-52835369]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13476[chr12:52835077-52835369]
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Tissue distribution of vista13476
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Transcription factor that possibly regulate vista13476[chr12:52835077-52835369]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 52835079 52835093 STAT1 JASPAR yes 82407249
chr12 52835079 52835093 STAT1 JASPAR yes 120941291
chr12 52835079 52835094 STAT2 JASPAR yes 82407250
chr12 52835079 52835094 STAT2 JASPAR yes 120941292
chr12 52835090 52835101 ELK4 JASPAR yes 82407251
chr12 52835090 52835101 FLI1 JASPAR yes 82407252
chr12 52835090 52835101 ELK4 JASPAR yes 120941293
chr12 52835090 52835101 FLI1 JASPAR yes 120941294
chr12 52835091 52835101 GABPA JASPAR yes 82407253
chr12 52835091 52835101 GABPA JASPAR yes 120941295
chr12 52835091 52835104 ELF1 JASPAR yes 82407254
chr12 52835091 52835104 ELF1 JASPAR yes 120941296
chr12 52835121 52835125 YY1 TRANSFAC yes 82407255
chr12 52835121 52835125 YY1 TRANSFAC yes 120941297
chr12 52835158 52835172 JUN JASPAR yes 82407256
chr12 52835158 52835172 JUN JASPAR yes 120941298
chr12 52835161 52835172 FOSL2 JASPAR yes 82407257
chr12 52835161 52835172 JUNB JASPAR yes 82407258
chr12 52835161 52835172 FOSL2 JASPAR yes 120941299
chr12 52835161 52835172 JUNB JASPAR yes 120941300
chr12 52835162 52835173 FOS JASPAR yes 82407259
chr12 52835162 52835173 FOSL1 JASPAR yes 82407260
chr12 52835162 52835173 JUND JASPAR yes 82407261
chr12 52835162 52835173 NFE2 JASPAR yes 82407262
chr12 52835162 52835173 FOS JASPAR yes 120941301
chr12 52835162 52835173 FOSL1 JASPAR yes 120941302
chr12 52835162 52835173 JUND JASPAR yes 120941303
chr12 52835162 52835173 NFE2 JASPAR yes 120941304
chr12 52835163 52835172 JDP2 JASPAR yes 82407263
chr12 52835163 52835172 JDP2 JASPAR yes 120941305
chr12 52835163 52835174 FOSL2 JASPAR yes 82407264
chr12 52835163 52835174 JUNB JASPAR yes 82407265
chr12 52835163 52835174 FOSL2 JASPAR yes 120941306
chr12 52835163 52835174 JUNB JASPAR yes 120941307
chr12 52835163 52835177 JUN JASPAR yes 82407266
chr12 52835163 52835177 JUN JASPAR yes 120941308
chr12 52835164 52835175 BATF JASPAR yes 82407267
chr12 52835164 52835175 BATF JASPAR yes 120941309
chr12 52835177 52835183 SOX10 JASPAR yes 82407268
chr12 52835177 52835183 SOX10 JASPAR yes 120941310
chr12 52835196 52835217 ZNF263 JASPAR yes 82407269
chr12 52835196 52835217 ZNF263 JASPAR yes 120941311
chr12 52835197 52835202 ETS2 TRANSFAC yes 82407270
chr12 52835197 52835202 ETS2 TRANSFAC yes 120941312
chr12 52835238 52835244 SOX10 JASPAR yes 82407271
chr12 52835238 52835244 SOX10 JASPAR yes 120941313
chr12 52835245 52835260 HNF4G JASPAR yes 82407272
chr12 52835245 52835260 HNF4G JASPAR yes 120941314
chr12 52835246 52835260 RXRB JASPAR yes 82407273
chr12 52835246 52835260 RXRG JASPAR yes 82407274
chr12 52835246 52835260 RXRB JASPAR yes 120941315
chr12 52835246 52835260 RXRG JASPAR yes 120941316
chr12 52835246 52835261 HNF4A JASPAR yes 82407275
chr12 52835246 52835261 HNF4A JASPAR yes 120941317
chr12 52835249 52835255 TCF1 TRANSFAC yes 82407276
chr12 52835249 52835255 TCF1 TRANSFAC yes 120941318
chr12 52835263 52835268 NFY TRANSFAC yes 82407277
chr12 52835263 52835268 NFY TRANSFAC yes 120941319
chr12 52835265 52835271 NFIC JASPAR yes 82407278
chr12 52835265 52835271 NFIC JASPAR yes 120941320
chr12 52835280 52835287 CEBPA TRANSFAC yes 82407279
chr12 52835280 52835287 CEBPA TRANSFAC yes 120941321
chr12 52835300 52835312 GRHL1 JASPAR yes 82407280
chr12 52835300 52835312 GRHL1 JASPAR yes 120941322
chr12 52835301 52835311 TFCP2 JASPAR yes 82407281
chr12 52835301 52835311 TFCP2 JASPAR yes 120941323
chr12 52835325 52835336 FOS JASPAR yes 82407282
chr12 52835325 52835336 FOS JASPAR yes 120941324
chr12 52835327 52835333 JUN TRANSFAC yes 82407283
chr12 52835327 52835333 JUN TRANSFAC yes 120941325
chr12 52835333 52835339 GATA3 JASPAR yes 82407284
chr12 52835333 52835339 GATA3 JASPAR yes 120941326
chr12 52835337 52835347 NFATC3 JASPAR yes 82407285
chr12 52835337 52835347 NFATC3 JASPAR yes 120941327
SNP sites on vista13476[chr12:52835077-52835369]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 52835321 rs429561 C G no 2638870
Genes possibly regulated by vista13476[chr12:52835077-52835369]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 52753790 52761265 - KRT85 ENSG00000135443.4 52761265 0.83 1.0 12084 26188
chr12 52771596 52779436 - KRT84 ENSG00000161849.3 52779436 0.99 0.96 12085 44359
chr12 52787715 52800139 - KRT82 ENSG00000161850.2 52800139 0.98 1.0 12086 65062
chr12 52817854 52828309 - KRT75 ENSG00000170454.5 52828309 1.0 1.0 12087 93232
chr12 52840435 52845910 - KRT6B ENSG00000185479.5 52845910 0.99 0.97 12088 89459
chr12 52862300 52867569 - KRT6C ENSG00000170465.9 52867569 0.96 0.93 12089 67800
chr12 52880958 52887041 - KRT6A ENSG00000205420.6 52887041 0.99 1.0 12090 48328
chr12 52908359 52914471 - KRT5 ENSG00000186081.7 52914471 0.99 0.99 12091 20898
chr12 52922915 52922980 + AC055736.1 ENSG00000268716.1 52922915 0.0 0.0 12092 12454
Expression level of Genes
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miRNAs possibly regulated by vista13476[chr12:52835077-52835369]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results